Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0754 ATGGGGTCACAAGGTGGAACAGTTTCAGAGTCAAAGACTTTACCTTTATCTAGGTCAGGATCTTTGTATAATCTAACACTTGATGAAGTTCAAAACCATCTTGGTAATTTAGGGAAACCACTTGGAAGTATGAATCTTGATGAGTTGCTTAAGAGTGTATGGAGTGTTGAAGCTGGCGAGGTTTCGGATTTCGGTGGTAGTGATGTTGCTGCTACTGCTGGTGGTAACATGCAGCATAATCAACTTGGTGGTTTCAATTCACAAGAGAGTTTAACTTTATCTGGAGATCTTAGTAAGAAAACTGTTGATGAGGTGTGGAAAGATATGCAAGGGAAGAAGAGGGGTGTTGATAGGGATAGGAAATCGCGCGAAAAACAACAGACACTTGGTGAGATGACTTTGGAGGATTTCTTGGTAAAAGCTGGAGTTGTTGGTGAATCTTTTCATGGTAAAGAAAGTGGTTTGTTAAGGGTTGATTCGAATGAGGATTCTCGGCAAAAAGTTTCACATGGTCTTCATTGGATGCAATATCCGGTCCATTCTGTTCAGCAGCAACAACATCAGTATGAAAAGCATACGATGCCGGGTTTTGCGGCAGTTCATGCCATTCAACAGCCTTTTCAGGTTGCAGGGAATCAAGCTTTGGATGCAGCGATATCGCCATCTTCTTTAATGGGTACGTTATCAGATACACAAACGCTAGGTCGAAAAAGGGTTGCTTCTGGTATTGTAGTGGAGAAAACTGTCGAGAGGAGGCAAAAGAGGATGATAAAAAATAGGGAATCTGCTGCTCGGTCACGAGCAAGAAGACAGGCTTATACACAAGAACTGGAACTTAAAGTTTCGCGTTTAGAAGAGGAAAATGAAAGGCTTAGAAGACAGAATGAGATGGAGAAGGAGGTACCAACTGCACCGCCACCCGAGCCTAAAAATCAGCTCCGCAGAACTAATTCAGCATCCTTTTGA 966 0.4255 MGSQGGTVSESKTLPLSRSGSLYNLTLDEVQNHLGNLGKPLGSMNLDELLKSVWSVEAGEVSDFGGSDVAATAGGNMQHNQLGGFNSQESLTLSGDLSKKTVDEVWKDMQGKKRGVDRDRKSREKQQTLGEMTLEDFLVKAGVVGESFHGKESGLLRVDSNEDSRQKVSHGLHWMQYPVHSVQQQQHQYEKHTMPGFAAVHAIQQPFQVAGNQALDAAISPSSLMGTLSDTQTLGRKRVASGIVVEKTVERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENERLRRQNEMEKEVPTAPPPEPKNQLRRTNSASF* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0754 321 Coils Coil 270 301 - -
Mtr6g0754 321 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 319 IPR043452 GO:0003700|GO:0045893
Mtr6g0754 321 MobiDBLite consensus disorder prediction 282 321 - -
Mtr6g0754 321 Gene3D - 249 302 - -
Mtr6g0754 321 PANTHER BZIP TRANSCRIPTION FACTOR 2 319 - -
Mtr6g0754 321 SUPERFAMILY Leucine zipper domain 251 299 IPR046347 GO:0003700|GO:0006355
Mtr6g0754 321 Pfam bZIP transcription factor 251 297 IPR004827 GO:0003700|GO:0006355
Mtr6g0754 321 CDD bZIP_plant_BZIP46 251 305 - -
Mtr6g0754 321 MobiDBLite consensus disorder prediction 282 299 - -
Mtr6g0754 321 SMART brlzneu 247 315 IPR004827 GO:0003700|GO:0006355
Mtr6g0754 321 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 254 269 IPR004827 GO:0003700|GO:0006355
Mtr6g0754 321 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 249 294 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0754 Mtr-Chr6 9542269 9545575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0754 1 321 bZIP Transcription Factor Family AT3G56850 55.389 3.19e-105 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr6g0754 bZIP_1 4.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0754 K14432 - gmx:100170741 369.007