Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0724 ATGACATTTAGCTCGGAAGCGGAAGTTACCTTGTATTACATGAATTATGCTCAACGTATGGGTTTCGGGATGAGTAAAATAAGTTCAAAAAATGGAGATGATGGAAAAAAATATTTTACTTTAGCATGTAGTCGTGCAGGAAAGTATGTGAGCACTTCAAAGAATCTTTTGAAGCCAAATGCTAGCATTAAAACACAATGTAGGGCAAGACTGAATGCATGTATATGTCTGGATGGAAGAGTTGTAGTTACAAGTGTTACTCTTGACCATAATCATGGCCTTAGCCCAAACAAGGCACGATACTTTAGATGTAACAAGAATATGGGGTCTCACATAAAAAGGAAATTAGAGATTAATGATCAAGCAGGTATCAATGTCAGTAGAAATTTTAGATCTATGGTTGTTGAAGCAAACGGGTACGAGAATCTCACATTTGGTGAAAAAGACTGTAGAAACTATATAGACAAGGTCAGGCGGCTAAGGCTTGGGACAGGAGACGCTGAAGCAATACAAAACTATTTTGTTAGAATGCAAAAGCAAAATAGTCAGTTTTATTATGTAATGGATGTGGATGATGATAGCCGTTTAAGAAATGTATTCTGGGCAGATGCAAGATGTAGGGCTGCATATGAATACTTTGGTGAAGTCGTAACTTTTGACACCACTTATTTAACAAACAAATATGACATGCCTTTTGCTCCTTTTGTTGGAGTAAATCATCACGGTCAATCTGTATTGTTGGGTTGTGCACTCTTATCAAAAGAGGATGCTAAAACTTTTACTTGGTTATTCACCACGTGGTTAGAATGCATGCATGGACGCGCTCCAAATGCCATTATTACTGATCAGGATAAGGCAATGAAAAAGGCGATTGAGGTTGTCTTCCCAAAAGCCCGTCATAGATGGTGCTTATGGCATTTAATGAAAAAGGTACCTGAAAAGTTTGGTAAATACTCAGAATATGAGTCTATTAAAGAACTTTTGCATGCTGCTGTATATGATTCTTTGAGCAAAAGTGATTTCTTAGAGAGGTGGGAAAAAATGATTGAATGTTATGCGCTACATGATAATGAATGGTTGAAAGGGATATTTGAGGAGCGACATCGTTGGGTTCCTGTGTATGTGAGAGACGTGTTTTGGGCCGGGATGTCAACTACACAACGAAGTGAAAGTATGAATTCATTTTTTGATGGGTATGTATGCTCAAAGACATCATTGAAGCAATTTGTTGAACAATATGACAGTGCATTGAAAGATAAGATTGAAAAGGAAAGCAAGGCTGATTTTGGTTCATTTAATTCAGTAATTGCTTGTGTAAGTCATTTTGGCTTTGAATCACAATTCCAAAAATCATTTACCAATGCAAAATTCAAAGAATTTCAAGTAGAAGTTTCTTCTATGATGTATTGCCATACTTCATTTGAAGAATTGGTGGGTTATAATTCTATATTTTATGTGATAGAAAGTAAGAAAGTATACGACAAAGCAAAAGATGTGGTATTCAAGGTGTCCTACAATGAAAAAGACTTTGAGATACAATGTACTTGCTGCTTATTTGAGTTTAAAGGCATTTTGTGTAGACACATACTATGTGTGCTTAAACTCTCTGGTAAAACAGATTTAGTGCCATCTCATTATATTTTTTCTCAGTGGAGGAAGGATATAAAGCGACGACATACAGTTATTAAATGTGGTATTGATAACTTGACTGGAAATGTTGAGTTACAGCGTGTTGGTAAAGCATGTGATGCCTTTTATGAAGTTGCTTCTATAGATATAAGCACCGAAGAAGAGTTATTGGAAGTGATGAATTGGATCAAGGACTTGAAAATTAAGTTAACTTGTAAAAAAAATTCTCCGATTATTATAGAAGAAGTTAATTCAATTCAAAATCAAGCGTCGAGAATTCTGGATCCCATAGTGGCTAGAGGAAAAGGGCGCCCTCCTTCAAAACGAAAGGCTTCTATAGTTGATAAAATTATAAAGAAGAAGATTGCAGGAAAAAAAACTCGAAGTAGCCAAAAAAGAACAAGTTGTCAAAGTTCAGAAGAGGTGATTTTGAGTTTGTAA 2070 0.357 MTFSSEAEVTLYYMNYAQRMGFGMSKISSKNGDDGKKYFTLACSRAGKYVSTSKNLLKPNASIKTQCRARLNACICLDGRVVVTSVTLDHNHGLSPNKARYFRCNKNMGSHIKRKLEINDQAGINVSRNFRSMVVEANGYENLTFGEKDCRNYIDKVRRLRLGTGDAEAIQNYFVRMQKQNSQFYYVMDVDDDSRLRNVFWADARCRAAYEYFGEVVTFDTTYLTNKYDMPFAPFVGVNHHGQSVLLGCALLSKEDAKTFTWLFTTWLECMHGRAPNAIITDQDKAMKKAIEVVFPKARHRWCLWHLMKKVPEKFGKYSEYESIKELLHAAVYDSLSKSDFLERWEKMIECYALHDNEWLKGIFEERHRWVPVYVRDVFWAGMSTTQRSESMNSFFDGYVCSKTSLKQFVEQYDSALKDKIEKESKADFGSFNSVIACVSHFGFESQFQKSFTNAKFKEFQVEVSSMMYCHTSFEELVGYNSIFYVIESKKVYDKAKDVVFKVSYNEKDFEIQCTCCLFEFKGILCRHILCVLKLSGKTDLVPSHYIFSQWRKDIKRRHTVIKCGIDNLTGNVELQRVGKACDAFYEVASIDISTEEELLEVMNWIKDLKIKLTCKKNSPIIIEEVNSIQNQASRILDPIVARGKGRPPSKRKASIVDKIIKKKIAGKKTRSSQKRTSCQSSEEVILSL* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0724 689 MobiDBLite consensus disorder prediction 667 689 - -
Mtr6g0724 689 Pfam MULE transposase domain 216 310 IPR018289 -
Mtr6g0724 689 ProSiteProfiles Zinc finger SWIM-type profile. 501 537 IPR007527 GO:0008270
Mtr6g0724 689 PANTHER OS03G0843700 PROTEIN 1 600 - -
Mtr6g0724 689 Pfam SWIM zinc finger 501 533 IPR007527 GO:0008270
Mtr6g0724 689 Pfam FAR1 DNA-binding domain 12 95 IPR004330 -
Mtr6g0724 689 SMART 26again6 512 539 IPR006564 GO:0008270
Mtr6g0724 689 MobiDBLite consensus disorder prediction 672 689 - -
Mtr6g0724 689 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 600 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0724 Mtr-Chr6 8781381 8783450 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr6g0724 MULE 4.5e-36 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0724 - - cam:101506732 993.416