Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0717 ATGGCTCAGCAGCTCTCACCGGAAACCCTAGCAAAAATAAAAGCATACCGCATTTCTCCATCCGCGTTCCCAACTGAAATTTATGCGAATTCCATGCTTCAATTTCTTGAAAATTATCGTGATCTCAGCGTACCACCAGCAGACCATATCAACCAAGACTTGACCAATGCTAAGATGATTGCAACAAGTAATTCTATGCTCCAACAACAAGTCCAACTCAGACACCTGGTTTCGCAACATCATTTGCGTCTTAATGGTGGTATGGTTGAACAACCGGATAGGAAGAAAAGAAAGAATGCAGATGACTTAATTGGTTCATCGAGTGCGCCTGTTTCACGACCTTGCATCTGTGGTGGCAAATCTGGCCTCCCTATTAATACCGGAAATGTTACTTCCCAAATTGCTAGGAACTATGGCCTCCCTAGTATGGGATCAACCAATACTACAAACAAATGTTTGAATGACCTGCATGGTCCAGATGGTCAACTTCCTGAGAAGTTGAGGAATGTAACACCTTACTACATTGAACAAGTCAGTAATGAGATTATGGATAAAAATCCCGATGTCCATTGGAATGACATTGCTGGATTGACCCATGCCAAAAAATGTGTCAATGAGATGGCCGTATTACCTCTGCGACGTCCTGACTTATTTATGGGTTGCCGTTCTCCTGGGAGAGGTCTGCTCCTATTTGGTCCACCAGGAACTGGTAAAACAATGATCGGAAAAGCCATAGCTGGGGAGGCAAAAGCAACCTTCTTTTACATATCTGCAAGCTCGTTGACTAGCAAGTGTTTTGGTGAAGGTGAAAAGCTAGTAACAGCCCTATTTGGAGTGGCCAGTTGTCGTCAGCCAGCAGTTATATTTGTTGATGAAATAGATTCACTCGTCTCAGGTATGCTAATAAATGAGTATGAAGTAACTGGACGTATAAAGACACAATTTCTTATTGAAATGGAAGGCTTTGCCGGTGGTAACGAGCAAGTCCTGGTTATTGGTGCAACAAATCGTCCCCAAGATCTTGATGAAGTAGCACAAAGGAGACTTACTAAACGACTATACATTCCTCTACCATCCTCAGACGCAAGAGCTTGGATTGCACGTAATCTTTTAGAGAAGGATGGATTATTCAAGCTATCAAATGAGGAAATGGAGATTATACGTGACTTAACGGATGGTTATTCAGGATTAGATATGACAAACTTAGTGAAGGATGCTTCTATGGGTCCACTGAGAGAGGCAATGGAACAAGGTATAGATATTATGGAGTTGAAAAAGGAGGATATGAGGCCAGTAACTCTTCAGGACTTCATGAATTCCATGCAAGAGATAAGGCCTTCTGTTTCACCTAATGAACTTGGCACTTTTGAGCAATGGAACAAGCAATTTAGAGGATGTCCTCTCATTGTATGGAGACAAAGCATCACACATTCTATAGTCATCTTGATGGGAATGGTCTTCATTTTTTGTTGA 1473 0.4189 MAQQLSPETLAKIKAYRISPSAFPTEIYANSMLQFLENYRDLSVPPADHINQDLTNAKMIATSNSMLQQQVQLRHLVSQHHLRLNGGMVEQPDRKKRKNADDLIGSSSAPVSRPCICGGKSGLPINTGNVTSQIARNYGLPSMGSTNTTNKCLNDLHGPDGQLPEKLRNVTPYYIEQVSNEIMDKNPDVHWNDIAGLTHAKKCVNEMAVLPLRRPDLFMGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKCFGEGEKLVTALFGVASCRQPAVIFVDEIDSLVSGMLINEYEVTGRIKTQFLIEMEGFAGGNEQVLVIGATNRPQDLDEVAQRRLTKRLYIPLPSSDARAWIARNLLEKDGLFKLSNEEMEIIRDLTDGYSGLDMTNLVKDASMGPLREAMEQGIDIMELKKEDMRPVTLQDFMNSMQEIRPSVSPNELGTFEQWNKQFRGCPLIVWRQSITHSIVILMGMVFIFC* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0717 490 PANTHER FIDGETIN-LIKE PROTEIN 1 108 463 - -
Mtr6g0717 490 MobiDBLite consensus disorder prediction 86 110 - -
Mtr6g0717 490 CDD AAA 221 357 - -
Mtr6g0717 490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 463 IPR027417 -
Mtr6g0717 490 MobiDBLite consensus disorder prediction 87 102 - -
Mtr6g0717 490 SMART AAA_5 224 359 IPR003593 -
Mtr6g0717 490 Pfam Vps4 C terminal oligomerisation domain 429 463 IPR015415 -
Mtr6g0717 490 PANTHER AAA DOMAIN-CONTAINING 108 463 - -
Mtr6g0717 490 Pfam ATPase family associated with various cellular activities (AAA) 228 357 IPR003959 GO:0005524|GO:0016887
Mtr6g0717 490 Gene3D - 187 460 IPR027417 -
Mtr6g0717 490 Gene3D - 358 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0717 Mtr-Chr6 8663536 8667510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0717 181 464 Calmodulin-binding Proteins AT3G56690 31.034 2.76e-35 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0717 K22766 - gmx:100789161 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0717 6 8663536 8667510 Mtr6g0717 6 8663536 8667510 ECH