Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0712 ATGGGGGAAGAATTAAGTTTTGTAATGGAAAACACATCAATGGAGGAAGAAGTTGAAGAAAGAGATCCAGAAAGAAATCCAATGAATGAACCACTTCTAAAGAGGAATAGAACACTTTCTTCAAATCCACTTGCTCTTGTTGGAGCAAAAGTTTCCTACATAGAAAGCTTAGATTATGAGATCAATGAGAATGATTTGTTCAAGCAAGATTGGAGAAGTAGATCAAGAGGTCAAGTGATGCAATACATTATCTTGAAATGGTTACTTGCATTCCTTGTTGGACTTCTTACTGGTGTTATAGCTACTCTTATCAATCTTGCTGTTGAGAATATTTCAGGGTATAAACTCCTTACTGTTGTTGGATACATTCAACAAGAAAGGTACTTGATGGGATTTCTATATTTCTTGGGGACTAATTTCTTGTTGACATTCATTGCTTCAATTCTGTGTGTTTGTTTTGCTCCAACTGCTGCTGGACCAGGCATACCTGAAATCAAAGCTTATCTTAATGGTGTTGATACTCCAAACATGTATGGTGCTACAGTTTTGTTTGTTAAGATAATTGGAAGCATAGGAGCTGTTTCAGCAGGTCTAGACTTAGGAAAAGAAGGTCCATTAGTACACATAGGAAGCTGCATTGCTTCCTTACTAGGCCAAGGAGGTCCAGACAATCATAGAATCAAATGGAAATGGGTAAGATACTTCAACAACGATCGCGACCGTCGCGATCTAATCACATGTGGAGCTTCGTCGGGGGTTTGCGCGGCTTTCCGAGCTCCGGTTGGCGGCGTTCTCTTTTCTCTTGAAGAGGTTGCAAGTTGGTGGAGAAGTGCTCTTTTATGGAGAACTTTTTGTAGCACAGCTGTTGTTGTGGTTGTTCTAAGGGCATTCATTGAACTTTGTCATGAAGGGAAATGTGGTCTTTTTGGTGAAGGAGGTTTGATTATGTTTGATGTTAGTAATGTTGCTGTGAGTTATAATGTTATGGATATTGTTCCTGTTGCTATTATTGGAATCATTGGTGGTGTCTTGGGAAGCCTTTATAACTATCTTCTTCATAAGATCCTTAGGGTCTATAATCTCATCAATCAGAAAGGAAAAATATACAAGCTTCTTCTAAGTCTCTCAGTATCAATCTTCACATCAGCATGTCAATATGGTCTTCCATTCCTAGTAAAATGTACACCATGTGATGATCTATCAATGTGTCCTACAAATGGAAAATCAGGAAACTACAAACAATTCAACTGTCCAAATGGCCATTACAATGACCTAGCTACTCTTCTACTCACAACAAATGATGATGCAGTTAGAAACATTTTCTCAACAAACACACCTCATGAATATCAACCTTTTTCAATCTTGATATTTTTCACACTATATTGCATATTAGGTTTAATCACTTTTGGCATTGCTGTTCCATCAGGACTTTTTTTACCTATCATATTAATCGGTTCGGGTTATGGACGTCTCCTCGGAATCATAATGAGGCCTTACACAAATATTGATCATGGTTTGTTAGCTGTTCTTGGTGCAGCTTCCTTGATGGCAGGGTCAATGAGAATGACTGTTTCACTTTGTGTTATCTTTCTTGAACTTACCAACAATCTTCTTTTGCTACCGATAACAATGATCGTTCTTCTCATAGCGAAAACCGTTGGAGATAGTTTCAATCCAAGTGTTTATGAGATGATACTTCATTTGAAGGGTTTACCTTTTATGGATGCTGATCCCGAACCGTGGATGAGAAATTTATCCGTCGGAGAACTTATTGATGTTAAATCATCGGTTGTTAGTTTTCGCGGCATTGAAAAGGTTTCCAACATTGTTGATGCCTTGAAGAACACTACACATAATGGTTTTCCTGTGATGGATGATGGTGATGAAGTTGAGATAGTAAAATTGCATGGAGTGATTTTAAGAGCACATTTGATAAAAGTGCTTAAGAAAAAGTGGTTTTTGAAAGAGAAAAGGAGAACTGAGGAATGGGAAGTTAGGGAGAAATTTAGTTGGGTTGAGTTGGCTGAGAGAGAAGAAAATATTGAAGATGTTATTGGTGTTACAAAAGAAGAAATGGAAATGTTTGTTGATCTTCATCCTCTTACTAATACAACTCCTTTCACCGTGTTAGAGAGTATGTCCGTAGCAAAAGCCCGAATCCTTTTCAGACAAGTCGGACTTCGTCATATGCTTGTTGTACCGAAGTATCAAGCGTCCGGGGTGTCTCCAGTAATTGGGATCTTGACAAGGCAGGATCTACTTGCCTACAACATTCTACCAGTCTTTCCTCACTTGGAAAATTCTAAGGGCAGAGAAAAAAGCAATTGA 2328 0.3832 MGEELSFVMENTSMEEEVEERDPERNPMNEPLLKRNRTLSSNPLALVGAKVSYIESLDYEINENDLFKQDWRSRSRGQVMQYIILKWLLAFLVGLLTGVIATLINLAVENISGYKLLTVVGYIQQERYLMGFLYFLGTNFLLTFIASILCVCFAPTAAGPGIPEIKAYLNGVDTPNMYGATVLFVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWKWVRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVASWWRSALLWRTFCSTAVVVVVLRAFIELCHEGKCGLFGEGGLIMFDVSNVAVSYNVMDIVPVAIIGIIGGVLGSLYNYLLHKILRVYNLINQKGKIYKLLLSLSVSIFTSACQYGLPFLVKCTPCDDLSMCPTNGKSGNYKQFNCPNGHYNDLATLLLTTNDDAVRNIFSTNTPHEYQPFSILIFFTLYCILGLITFGIAVPSGLFLPIILIGSGYGRLLGIIMRPYTNIDHGLLAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSVYEMILHLKGLPFMDADPEPWMRNLSVGELIDVKSSVVSFRGIEKVSNIVDALKNTTHNGFPVMDDGDEVEIVKLHGVILRAHLIKVLKKKWFLKEKRRTEEWEVREKFSWVELAEREENIEDVIGVTKEEMEMFVDLHPLTNTTPFTVLESMSVAKARILFRQVGLRHMLVVPKYQASGVSPVIGILTRQDLLAYNILPVFPHLENSKGREKSN* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0712 775 Pfam CBS domain 596 649 IPR000644 -
Mtr6g0712 775 Pfam CBS domain 704 756 IPR000644 -
Mtr6g0712 775 PANTHER CHLORIDE CHANNEL PROTEIN 1 770 - -
Mtr6g0712 775 MobiDBLite consensus disorder prediction 11 31 - -
Mtr6g0712 775 SMART cbs_1 705 758 IPR000644 -
Mtr6g0712 775 SMART cbs_1 596 649 IPR000644 -
Mtr6g0712 775 CDD CBS_pair_voltage-gated_CLC_euk_bac 594 756 - -
Mtr6g0712 775 Gene3D Clc chloride channel 78 576 - -
Mtr6g0712 775 CDD ClC_6_like 55 574 - -
Mtr6g0712 775 Gene3D - 601 744 IPR046342 -
Mtr6g0712 775 PRINTS Chloride channel signature 155 172 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr6g0712 775 PRINTS Chloride channel signature 186 205 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr6g0712 775 PRINTS Chloride channel signature 250 269 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr6g0712 775 PRINTS Chloride channel signature 473 493 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr6g0712 775 PRINTS Chloride channel signature 505 521 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr6g0712 775 PRINTS Chloride channel signature 523 542 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr6g0712 775 PRINTS Chloride channel signature 561 575 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr6g0712 775 ProSiteProfiles CBS domain profile. 702 766 IPR000644 -
Mtr6g0712 775 SUPERFAMILY CBS-domain pair 579 756 IPR046342 -
Mtr6g0712 775 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 1 770 - -
Mtr6g0712 775 PRINTS Plant CLC chloride channel signature 60 68 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mtr6g0712 775 PRINTS Plant CLC chloride channel signature 271 279 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mtr6g0712 775 PRINTS Plant CLC chloride channel signature 285 295 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mtr6g0712 775 PRINTS Plant CLC chloride channel signature 303 310 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mtr6g0712 775 PRINTS Plant CLC chloride channel signature 425 441 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mtr6g0712 775 Pfam Voltage gated chloride channel 143 554 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr6g0712 775 SUPERFAMILY Clc chloride channel 64 576 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0712 Mtr-Chr6 8604992 8611106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0712 19 770 Ion Channels AT3G27170 75.789 0.0 1190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0712 K05016 - gmx:778094 1301.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0712 6 8604992 8611106 Mtr6g0712 6 8604992 8611106 ECH
Mtr7g0693 7 10682286 10687472 Mtr6g0712 6 8604992 8611106 PCT