Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0645 ATGGGGCAGGAGAATCAGAGCCCCAAGGATTCCTGTGCTGCAGACAGTAAAGTGATCGTTGGCAATGAGACTGATTGTACAAGTGCAAATGCTCATCCTGTTAGCCTTACTCAGATGGAAACCAATGATGAATGTCAGACCTCAAATACTTCCAATGAAGATCAATTGCATATTGACGTTGGCAGAGGACCGCTGTGTCAAAACCCTGATGCTACCTCTATATCAGTGACTGTTACTGATGTAAAAAATGAGGAGGAAATATATGTTGCACCAAATATTGGCATGGAGTTCGAATCGGAAGACCATGCTTACAAGTGTTATAACAAGTATGCTATTCTGAAAGGTTTCAGCATAAGAAAGGATTTCATCAACAAAAGTAGGATAGATGGTTCAGTGATGTCCAGAAGATTCACCTGCCATAGACAAGGTTTTCGTCCTAACAAAGGCTATACAAATCCAAAGAAATTTCAACAGGAAACAAGAACCGGTTGCTTGGCACATTTGACTATTTGTCGTCAGCCAAATGGCAAGTTTCGTGTCACTAGTTTTGAAACTGAGCACAATCACGAGTTTATAACACCGTGTAATGCTCATATGCTGCCATCACAGAAAAAAATGAATTTCGCTCAAGCTCTTGAAGTGAACATAACCGAGTCCACGTTGGATGGAGTACCAAAACTGGGAATGGGATTTGATTCCGAGGAGCATGCATATGAATTTTATAATACGTATGCTGCACAAGTAGGTTTCAGTGTGAGAAAAGATTATGTAAATAGGAGTAAAGTTGATGGTGCTGTAGCATCAAGAAGATTTACTTGCTTCAGGGAAGGTTTTCGGCAGAAAGAGAAACGAGATACAGATGTAAAGAGACCTCGGAAGGATACTAGAATTGGATGTTTAGCACAGCTGATTATTTCTCGTCAGCCTGATGGCAGGTATCATGTATCTAATTTTGAAGAAAAACACAATCATGAGCTTGTGGCTGCGAGTAGAGTTCATATGTTACGATCGCAGAAGAGATTAGCTGCAACTCAAGCTGAAGACAACATTGTTGATGAAGGTTTTCATGATCTGGATTACGACCTTGTGAATTATGAATATCAACTACCTTTCAAACGCACAAGAGAAATACAAGAGGAAGAAGTCGAAAAGATTAGGCACTACTTTCAAAGCAAGAAATCAAAGGATCCTTCTTTCTTTTATGCTTTTCAGCATGACGCCGAGAATCAAATAGCTAACATATTTTGGGCTGACGCAAAGATGAAAGCAGACTACAGTGATTTCGATGATGTTGTTTGTTTTGATACGAGTTATAAATTTTATAAAGACTCCCGGCCGTTCGCTCCATTTCTTGGTATAAATAATCACAGGCAAGTGCTTATTTTTGGAGCTGCACTTCTATACAATGAATCTGTGGAATCTTTTAAATGGCTGTTTCATGTTTTCATGGAGGCTATGTCTGGAACGAAGCCAAAGACAATCCTAAGAGATCAAGATGCAATAGTAGCTGAAGCTGTTAACTCCATACTACCTCAAACAAATCAACGAGTTTGTGTATGGCATGTCTACCAAGATGCCCTCAAGCAACTGAGTCATATGTTAGTTGAATCCGATTCTTTTGTAAATGATTTGAGCAGCTGCTTTTTTAATCATGAGGAAGAAGAGGATTTTGTTAATGCCTGGACTACTCTCATGGACATGTATAATCTGTGGGAAAATGAATGGTTGCGTCAAATATACGAAACCAGAGACCAATGGGCCATAGCATACGAAAGACATATTTTTTGTGCCGACATAGCAAGCTTACTTGTGCAAGAAAATCTTACTGGCAACTTGAAAAAGCACCTAAAGAACGACTCAGGTGTTCTTCCATTTCTCAAGCATCTCGGGAAGATGGTGACTGATTGGCACTACAAGGAATTAGAAGCTAATTATGACGCAAGCCGACATATGCCAGCACTAATGGGTGATATCATTACGCTAAAGCATGCAAGAGATCCATACACACCAAAGATATTTGAGTTATTCCAGAAAGAATATGAAGCATGTCTAAATCTAGTGCTGGAGCATTGCAGTGAGAGTGGATTGTTGTATAATTATAAAGTTAGCGTATATGAACAAGTCCGAGAGTATACAGTTACTTTCAATTCATCGAATGAGACAATCAGTTGCAGCTGTAAGAAATTTGAGTGTGTCGGAGTCTTGTGCTGCCATGCATTAAAAGTTCTTGATTATAGAAACATAAGGATAGTTCCATCCAAGTACATCTTAAAGAGATGGACTAAAGATGCTAGAGTTTGA 2301 0.3924 MGQENQSPKDSCAADSKVIVGNETDCTSANAHPVSLTQMETNDECQTSNTSNEDQLHIDVGRGPLCQNPDATSISVTVTDVKNEEEIYVAPNIGMEFESEDHAYKCYNKYAILKGFSIRKDFINKSRIDGSVMSRRFTCHRQGFRPNKGYTNPKKFQQETRTGCLAHLTICRQPNGKFRVTSFETEHNHEFITPCNAHMLPSQKKMNFAQALEVNITESTLDGVPKLGMGFDSEEHAYEFYNTYAAQVGFSVRKDYVNRSKVDGAVASRRFTCFREGFRQKEKRDTDVKRPRKDTRIGCLAQLIISRQPDGRYHVSNFEEKHNHELVAASRVHMLRSQKRLAATQAEDNIVDEGFHDLDYDLVNYEYQLPFKRTREIQEEEVEKIRHYFQSKKSKDPSFFYAFQHDAENQIANIFWADAKMKADYSDFDDVVCFDTSYKFYKDSRPFAPFLGINNHRQVLIFGAALLYNESVESFKWLFHVFMEAMSGTKPKTILRDQDAIVAEAVNSILPQTNQRVCVWHVYQDALKQLSHMLVESDSFVNDLSSCFFNHEEEEDFVNAWTTLMDMYNLWENEWLRQIYETRDQWAIAYERHIFCADIASLLVQENLTGNLKKHLKNDSGVLPFLKHLGKMVTDWHYKELEANYDASRHMPALMGDIITLKHARDPYTPKIFELFQKEYEACLNLVLEHCSESGLLYNYKVSVYEQVREYTVTFNSSNETISCSCKKFECVGVLCCHALKVLDYRNIRIVPSKYILKRWTKDARV* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0645 766 Pfam MULE transposase domain 431 524 IPR018289 -
Mtr6g0645 766 Pfam SWIM zinc finger 701 746 IPR007527 GO:0008270
Mtr6g0645 766 Pfam FAR1 DNA-binding domain 107 192 IPR004330 -
Mtr6g0645 766 Pfam FAR1 DNA-binding domain 239 327 IPR004330 -
Mtr6g0645 766 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 79 208 IPR031052 GO:0006355
Mtr6g0645 766 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 216 766 IPR031052 GO:0006355
Mtr6g0645 766 ProSiteProfiles Zinc finger SWIM-type profile. 711 747 IPR007527 GO:0008270
Mtr6g0645 766 SMART 26again6 722 749 IPR006564 GO:0008270
Mtr6g0645 766 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 79 208 - -
Mtr6g0645 766 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 216 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0645 Mtr-Chr6 7914557 7919051 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr6g0645 MULE 1.2e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0645 K17604 - gmx:102659753 1178.31