Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0638 ATGTTCATTTTTTTTTCTACTAGTATACCCAACTTTGCTTTCCTGCTGTGTTTCGCTATCCAAGTGATTGTATCTAATTCAAATGTTGTATCTATTATGCACAACAAAATGGATATGGATGAAATTCTAGAAATTTTCGAACTTTCAAATGCAAGCAACATAGCTGGGGAAACCAACATAGGTTTGGAAGGTTTAGAGAACATGGGCAGTAGCTCTTGTTCGGAGAGTGTTGTATGTTCCTCAGATGATCATATGGAAGACACGTACAATTCGATGTATGGGTGCAATTTTGATGATGAATATGCGGTTGATTGCACGAATGACTTTGACAAAATTAATTTTAAGGAATTAATCTATGATGAAATTATGATGTACCATTTTTCGGATCGTCTAGTTGCATTCAAGTTTTATAATATGTACAGTTGTGTATGTGGGTTTGAAGGTAGAAGATGTCGTTTTGTTAAGAACAAGGATGACGATGTTATTCAACAAACCTTTGTTTGTCACAGAGAAGGTCACCGATATGCAAGGGATGACAATAAGCCGTATAGAAAAAGAGTGCAGAAGCCAACTAGTAGGTGTGGGTGTATGACAAGTATTCAAGTACACGTTGACTATGGTAGTGAACGGTGGTACATAAAAATGTTTGACGATGTACATAATCACTCATTTTTGGATAATAAGTATGAGGGGATGCTACCTGCACATAGAAAGATGAGTGATTATGACAAATATCAAATGAAAGCAACGAGGAAAGCTGGCATTCCTACATCACGTATCTATGGTTTTTTTGTTTCACAAGCTGGTGGATTCAAAAATCTAGGATATTCAAGAAGGACCATGTACAATGAGCAATTCTAG 861 0.3624 MFIFFSTSIPNFAFLLCFAIQVIVSNSNVVSIMHNKMDMDEILEIFELSNASNIAGETNIGLEGLENMGSSSCSESVVCSSDDHMEDTYNSMYGCNFDDEYAVDCTNDFDKINFKELIYDEIMMYHFSDRLVAFKFYNMYSCVCGFEGRRCRFVKNKDDDVIQQTFVCHREGHRYARDDNKPYRKRVQKPTSRCGCMTSIQVHVDYGSERWYIKMFDDVHNHSFLDNKYEGMLPAHRKMSDYDKYQMKATRKAGIPTSRIYGFFVSQAGGFKNLGYSRRTMYNEQF* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0638 286 Pfam FAR1 DNA-binding domain 135 224 IPR004330 -
Mtr6g0638 286 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 66 247 - -
Mtr6g0638 286 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 66 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0638 Mtr-Chr6 7844167 7849572 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr6g0638 FAR1 3.5e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0638 - - mtr:MTR_6g022080 527.324