Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0620 ATGTTCACATCAAGGAAGAAAATCAGCAAGGATAAAGGTGCTGAGCCCACTGAATTTGAGGAATCTGTCGGACAGGCTTTGTTTGATCTCGAAAACACAAACCACGAGCTGAAAAGTGAGCTCAAAGATTTATACATTAATTCAGCAGTCCAAGTCGATGTTTCTGGCAACCGCAAGGCTGTGGTTATCCATGTCCCATATAGATTGAGGAAGGGATTCCGCAAGATTCATGTCAGGCTTGTTAGGGAGCTCGAGAAGAAATTCAGCGGAAAGGATGTTATCCTGATTGCCACCAGGAGGATTGTTAGGCCACCAAAGAAAGGTTCCGCTGCTCAGCGCCCCCGTAGCCGTACACTTACTGCTGTGCACGAGGCAATGCTCGAGGATGTTGTGTTACCTGCTGAGATTGTTGGCAAGCGCACTAGGTACCGAGTTGATGGATCAAAGATCATGAAGGTGTTTTTGGACCCAAAGGAGAGAAACAATACCGAATACAAATTGGAGACGTTTTCTGCCGTTTACAGGAAACTATCAGGCAAAGATGTTGTCTTTGAGTATCCGGTTACTGAGGCTTAG 576 0.4601 MFTSRKKISKDKGAEPTEFEESVGQALFDLENTNHELKSELKDLYINSAVQVDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAQRPRSRTLTAVHEAMLEDVVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLETFSAVYRKLSGKDVVFEYPVTEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0620 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Mtr6g0620 191 Coils Coil 27 47 - -
Mtr6g0620 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
Mtr6g0620 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Mtr6g0620 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0620 Mtr-Chr6 7619440 7622521 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0620 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 81.152 6.18e-117 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0620 K02993 - gmx:100527680 354.369