Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0577 ATGGAAATCGATTCATCTTCTTCTTTGCTAAAACTGAAAGAGAGTGAGGTTGTTGTTGTTGTTGTTGATGCAAATGGAAAACAACAAGTGAGTCGTCGTAACAACTCACGCGGAGTTCGTGTTATTGGAAATCGAATCTATGATTCTGAAAATGGAAAATCTTGTCACCAGTGTCGGCAAAAAACAATGGATTTTTCTGCTGCTTGTAAGAATCCAAGAGGTGGGAAGCCTTGTGTCATCAGGTTCTGCCACAAATGCCTCTTGAACAGATATGGGGAAAAGGCGGAAGAGGTAGATCTATTGAATGATTGGAATTGTCCAAAGTGCAAAGGCATCTGCAACTGCAGTCGTTGCATGAAAAATAGAGGTCATCAACCTACTGGTATACTTGTTCATTCGGCCAAGGCATCCGGTTATAACTCTGTGTCAGCAATGCTTGCCAAGAAGGCTTCTGAAGGTTTGGAATCGAACAATATTGTTGTTTTGCCTTCAAAAGAAGCAAATTTGGAAAAGGAGCTTGTAGTGGATCTATCATGGGAACCTGAGAAGGAAAACTCATTATGTGAAAACATAGGGTTAAAGGTTGAAGATGAGAAAACAAAGAAAATGAAGCGGGAAAAGTTAAAGGAAATATCTAATGGCAACAATGTTGACAATGCTCGTGAAAACAAGAAATTGAAAAGGCCTAAACTTTCCAATGGAGTTTCCGATGGTGATGTGAAAAGAAATGCTGATGCTGAAATGGAAACAAAAGTAGAGCAGAGTCATGGAATGATTCATTGTCAGATGGATGCTCCTAAGGCTTGTTCTGCAAATGATGATTCCTTCATTCCTAATCTAATGCATGGGAGAATTTGCCAAGGTACTGTTGTGATAGCTGATGGTGAAAATGCTGGTGCCAAGTCTCAAACAAATGCTATAGCTTTGAATGCTGAAAAAATTAAGGAGGAAATTCCTTTGCCCCTTGGCACCGAGATGACCAAAATATTAGACCTTGAGTTTGCACCCGAAGATGTTGGGAATGCATTGCAGTTTTTAGAATTCTGCAGAGTGTTTGGAAAGCCTCTCGATCTTAAGAAAGGAGAAGCAGGAGCTATTTTAAGAGCATTGCTACGTAAGCAAAATTTGCGACGTGGACAAAATGCCTTAGTTGTTGAGTTCCAAATCAAGCTGTTGACTTTGATTGTATCTGATTCAGATAATGAGTCTTCATCCTTAACTGCTGGCAATGGAAAAAATTCATGGTTGAAAGTTCTGGAGGATTTGATTACTGAATCTGGTGCTGCACTAAAAGATTTTCCGGCGGATTGGCTCAATAAAGGCATTAGCGGATATAATGATTTGGACTTACCTAAAAAGCTTATCCTTCTGAACTTTATCTGTGATGAAGCTTTGGGCACGATGAAGCTAAGGAGTTATATTGATGATCAAAATGCAATATTGGCTGAAGAAATGAAAGCAGCAAAATCTAAGGTCGCTGAAGCTAAGGAAAAGGAAAAAAGTCTTAAACAAAAGTTGCAGGATGAGATGGCTAAAGCTGCTATATCAAATGGAACAAACCTCTCAATTTCAGAATATGATGCTCTTGTTTCAAAAATTAAAATTGAAGCAGCTAAAGCTCATAGTGAGTTGCTTGAGGCAAAAGGCACAATTCCTAAACGGAACCAATGCTGTGATGCAGTGAGAATTGAGCCTGAGTACTTGGATAATAGTGGTAATGCATTCTGGAAATTAAAAAGCTATAATGGTGAATATGCTTTCTTGTTACAAGATGTGAAGATCCATGATGAAGATGTTGTTGAAGTTGATGAAAAATGGTTTGTTTATGGAGCTGAGCAGAAGGATGAGGTCACTAAGTACATTTCCTCTAGGAGAGATTGGTTACCAAAACTGACTTCAGTTTAG 1905 0.3885 MEIDSSSSLLKLKESEVVVVVVDANGKQQVSRRNNSRGVRVIGNRIYDSENGKSCHQCRQKTMDFSAACKNPRGGKPCVIRFCHKCLLNRYGEKAEEVDLLNDWNCPKCKGICNCSRCMKNRGHQPTGILVHSAKASGYNSVSAMLAKKASEGLESNNIVVLPSKEANLEKELVVDLSWEPEKENSLCENIGLKVEDEKTKKMKREKLKEISNGNNVDNARENKKLKRPKLSNGVSDGDVKRNADAEMETKVEQSHGMIHCQMDAPKACSANDDSFIPNLMHGRICQGTVVIADGENAGAKSQTNAIALNAEKIKEEIPLPLGTEMTKILDLEFAPEDVGNALQFLEFCRVFGKPLDLKKGEAGAILRALLRKQNLRRGQNALVVEFQIKLLTLIVSDSDNESSSLTAGNGKNSWLKVLEDLITESGAALKDFPADWLNKGISGYNDLDLPKKLILLNFICDEALGTMKLRSYIDDQNAILAEEMKAAKSKVAEAKEKEKSLKQKLQDEMAKAAISNGTNLSISEYDALVSKIKIEAAKAHSELLEAKGTIPKRNQCCDAVRIEPEYLDNSGNAFWKLKSYNGEYAFLLQDVKIHDEDVVEVDEKWFVYGAEQKDEVTKYISSRRDWLPKLTSV* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0577 634 Coils Coil 478 512 - -
Mtr6g0577 634 MobiDBLite consensus disorder prediction 209 251 - -
Mtr6g0577 634 PANTHER OS05G0300700 PROTEIN 24 624 IPR040221 GO:0006355
Mtr6g0577 634 SMART testlast3 336 401 IPR018501 -
Mtr6g0577 634 MobiDBLite consensus disorder prediction 220 251 - -
Mtr6g0577 634 Pfam DDT domain 337 398 IPR018501 -
Mtr6g0577 634 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 47 146 IPR018866 -
Mtr6g0577 634 PANTHER OS05G0300700 PROTEIN 24 624 - -
Mtr6g0577 634 ProSiteProfiles DDT domain profile. 336 401 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0577 Mtr-Chr6 6935451 6942715 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mtr6g0577 zf-4CXXC_R1 1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0577 - - mtr:MTR_6g017265 1183.7