LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr6g0560	ATGGATCCACCACGTCGTCCTCCTCGCACCATAATCGACCCCGTCCCCAAATTCCGTCAAGTCGGTTTCTTCACTCCATCCGCACCACCCGATCGTTCTCAATCCGGTCCACCCGACCCAACTCACTCTCCACCTTTACCCGAAACCTCCGCCGCCGCTTCTCTCTCCCCCGTCATGATCCCTCCTCCACGTCATCTCTCCGATAATCTCCTCATCCATCGTTCTGCAGCTATGGTGCCTTCGCCGCGGAGGGCGGAATCGATTAGTGTTGGTGGAAATGGTAGCTATTCTGATGCTGCGCCGGTGTCGCCGGCGCCGTCGTCGTCTTATTCGAGTAGGTTGGGTGGTGAAAGAGGGTTTTTTGATGGGAAGGAGAAGATTGTGGCGAGTTCGTTTCCGAGAGGGGGGTTTGATTTGACTGCTTTGAAAGGGAATGTTGTTGTGAAGGAGAGTGCTTTGACTACTGTTTCTGTTGTTAATGATTCTCTTGTGATTCATGAAAAAGAAAAACCACACAAAGGAGGAGGGTCAGCTGGGGAAATGAAAGACCAATCTAATAGTTCAAAACAACAGAAACCAAAACTCACAAAAGCTGAAAGACGTGAACTTCAAGAAGCTCAACGAGCTGCAAAGGCTGCTGCAAAAGGCGAAGGAAATAAGGCGTCTGCAACTGCTACATCAGCAAATGCAAGACCAGCTAAAGCAGTAAAGCCTGCACAAAAATCTGATAATGCATCAGTTGCAGCCACTGAGAAGAAGGGGGGTGATTTTCCACATGAAAAGGATAGAAAGAAAGATGTCCCTCAACCACGCTTGCAGTATGATGACAAGAGCCGAGTGGAGAAAGCTAAACGTCGTTCTGTGGTGAAACAAACTGAGGCTAGGAACAGAGTTGAGTTGTTCAGGCATTTACCACAATATGAACATGGGAGTCAGCTTCCAGATCTTGAGGCAAAGTTTTTCGACCTTTATCCTATGCATCCTGCTGTTTATAAGGTGGGTTTGCAATACATATCTGGAGATATATCTGGTGGCAATGATCGTTGTATTGCAATGCTTCAAGCATTTCAAGAGGCCATCAAAGACTACAAGGTTCCACCTGAGAAGAGTCTTGGAAGAGACTTGACAGCAAAAATTGGTAGTTATGTATCATTTCTTATTGAGTGCCGACCTCTGTCAATCAGCATGGGAAATGCAATTAGATTTCTCAAAAGTCAGATAGCCAAGCTACCTTTAACCTTGTCTGAGTCAGAAGCAAAAACTTCTCTCCAAGCAGATATTGAGCGTTTTATAAGTGAGAAGATCGTACTTGCCAACAAGGTCATAGTCAAGCACGCTGTCACCAAAATAAGAGATGGGGATGTTCTTCTAACTTATGGGTCATCATTGGCTGTTGAAATGATTCTTTTACATGCACACGAATTAGGAAAACAGTTTCGTGTTGTGATAGTTGATTCTCGTCCAAAGCTTAGAGGCCAGCAGTTACTCCGCAGGCTTGTGGAGAAAGGTCTTAACTGTACATACACTCATATAAATGGTGTTTCCTACATAATGCATGAAGTTAGTCGGGTTTTTCTGGGTGCTGAATCAATACTGTCTAACGGAACGGTATATTCAAGAGTGGGGACTGCAAGTGTTGCAATGGTTGCTCATGCAGCCCGTGTACCAGTCATAGTATGTTGTGAGGCCTATAAATTTCATGAAAGGGTACAGCTGGATTCAATTTGCTCGAATGAACTTGGTGATCCAGAAGTCATTTCAAATGTTCCAGGTAGAATGGATGTCAACCACTTGAATGGTTGGGCTGATATTGAAAATCTGCAACTTCTAAATTTGATTTATGATGCAATGCCTTCAGACTACGTTTCAATGATAGTCACCGATTATGGCATGGTCCCACCCACAAGTGTGCCAGTAATTGTAAGAGAATATGGGAGAGAGCAGGTCTGGATATAA	1956	0.4479	MDPPRRPPRTIIDPVPKFRQVGFFTPSAPPDRSQSGPPDPTHSPPLPETSAAASLSPVMIPPPRHLSDNLLIHRSAAMVPSPRRAESISVGGNGSYSDAAPVSPAPSSSYSSRLGGERGFFDGKEKIVASSFPRGGFDLTALKGNVVVKESALTTVSVVNDSLVIHEKEKPHKGGGSAGEMKDQSNSSKQQKPKLTKAERRELQEAQRAAKAAAKGEGNKASATATSANARPAKAVKPAQKSDNASVAATEKKGGDFPHEKDRKKDVPQPRLQYDDKSRVEKAKRRSVVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFDLYPMHPAVYKVGLQYISGDISGGNDRCIAMLQAFQEAIKDYKVPPEKSLGRDLTAKIGSYVSFLIECRPLSISMGNAIRFLKSQIAKLPLTLSESEAKTSLQADIERFISEKIVLANKVIVKHAVTKIRDGDVLLTYGSSLAVEMILLHAHELGKQFRVVIVDSRPKLRGQQLLRRLVEKGLNCTYTHINGVSYIMHEVSRVFLGAESILSNGTVYSRVGTASVAMVAHAARVPVIVCCEAYKFHERVQLDSICSNELGDPEVISNVPGRMDVNHLNGWADIENLQLLNLIYDAMPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWI*	652

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr6g0560	651	MobiDBLite	consensus disorder prediction	160	289	-	-
	Mtr6g0560	651	MobiDBLite	consensus disorder prediction	88	114	-	-
	Mtr6g0560	651	Gene3D	-	437	644	IPR042529	-
	Mtr6g0560	651	PANTHER	TRANSLATION INITIATION FACTOR EIF-2B	1	651	-	-
	Mtr6g0560	651	SUPERFAMILY	NagB/RpiA/CoA transferase-like	324	644	IPR037171	-
	Mtr6g0560	651	MobiDBLite	consensus disorder prediction	193	208	-	-
	Mtr6g0560	651	PANTHER	TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT	1	651	-	-
	Mtr6g0560	651	MobiDBLite	consensus disorder prediction	163	177	-	-
	Mtr6g0560	651	MobiDBLite	consensus disorder prediction	31	45	-	-
	Mtr6g0560	651	MobiDBLite	consensus disorder prediction	78	116	-	-
	Mtr6g0560	651	MobiDBLite	consensus disorder prediction	253	289	-	-
	Mtr6g0560	651	Pfam	Initiation factor 2 subunit family	342	634	IPR000649	GO:0044237
	Mtr6g0560	651	MobiDBLite	consensus disorder prediction	1	66	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr6g0560	Mtr-Chr6	6740176	6746338	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr6g0560	5	651	Eukaryotic Initiation Factors Gene Family	AT5G38640	63.429	0.0	763