Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0559 ATGTTCCCTTACAGTTCAAACCCTTACCCTTCATTTCTTCCTTCATCATCTTCTTCTTCTTCTTCTACTTCTTCACTCTTTCCTTTTCCTTTCCTAAATCCTGAAAATGCTTCTTCAAACAACAACAATAACACACTTTTTCATGATCCATTTTCAATTCCTTACATACCAATTCATCATCATCCTCATCCTAATCTTCATAACATTACAAATATTCCAGAAACCCTAACCAATTTGGCTGCTTCTCAAGAAAATAACAATAATAGTAACAACAATAATAATAACATTGCTATTCCAATGCCTAAACAAGATCCTTCATCTCTTGGTGGTGGTTCTCACTATGGTATTTCCTGTTTCCTCGCAAAGAAACCGGTGAAGAAAGACCGACACAGCAAGATTTACACTTCTCAAGGTTTGAGAGATCGAAGAGTGAGGCTTTCGATTGAGATCGCTCGAAAGTTCTTCGATCTTCAAGACATGTTAGGGTTTGACAAAGCTAGCAACACACTTGATTGGCTTTTCACAAAATCTAAGAAAGCAATTAAGGATCTAACTAAGAGTAAGCAAAGAAACAACAATAGTGAAGTTGGTGGTGATGCTAAAAGCTTCACATCTTCCTCAGATTGCGAAGATTCCGAGATTGCTACCAATAATTCTTCAAACCTAAAACAACATAAGGAAGGTGCAGGAAGTAAACATGAAGAGAAGAAGTTGAAAAGAGTACAGATCAAAGAACCAGCTTGTGTTAGAGCAAGTAAGATGAAGGAGTCAAGGGAAAAAGCAAGAGCAAGAGCAAGGGAAAGAACTAGTAACAAGATCTCAAACATAAGGGGGGTGCAAGAAGTAGAATTGAAGAAAAAATATGAAAATAATCTTCAAGCTTTTCAACAAGATCATCATAGTGAAGGACCAAGAAATGATTTTAATGTTATTGAAGAATCAATTGTGATTAAGAGAAAGTTGAAACCTTCTATGATGGTTTCTCATCATCATCATCATCCTCATTACCATCAAAGCCATGTGATCCCTAAGGAATCATCAACAAGTTTCAACAACAATGGAGATTTCAATTTCTTGCCAAATTCATCTCCAAATTGGGATGCTAATAATAATGGTACATCTTCCACTAATCGCTCCACCTTTTGTGCTATAGCCAGCATGAATCTTTCTACAGGGCTCCAAATCTTTGGAAAATCATGGGAGGAATGCACCAATCCACGTCTACATTAG 1230 0.3667 MFPYSSNPYPSFLPSSSSSSSSTSSLFPFPFLNPENASSNNNNNTLFHDPFSIPYIPIHHHPHPNLHNITNIPETLTNLAASQENNNNSNNNNNNIAIPMPKQDPSSLGGGSHYGISCFLAKKPVKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKDLTKSKQRNNNSEVGGDAKSFTSSSDCEDSEIATNNSSNLKQHKEGAGSKHEEKKLKRVQIKEPACVRASKMKESREKARARARERTSNKISNIRGVQEVELKKKYENNLQAFQQDHHSEGPRNDFNVIEESIVIKRKLKPSMMVSHHHHHPHYHQSHVIPKESSTSFNNNGDFNFLPNSSPNWDANNNGTSSTNRSTFCAIASMNLSTGLQIFGKSWEECTNPRLH* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0559 409 MobiDBLite consensus disorder prediction 190 225 - -
Mtr6g0559 409 MobiDBLite consensus disorder prediction 1 20 - -
Mtr6g0559 409 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 408 IPR005333 GO:0003700
Mtr6g0559 409 ProSiteProfiles R domain profile. 255 272 IPR017888 -
Mtr6g0559 409 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 4 408 - -
Mtr6g0559 409 MobiDBLite consensus disorder prediction 250 269 - -
Mtr6g0559 409 ProSiteProfiles TCP domain profile. 126 184 IPR017887 -
Mtr6g0559 409 MobiDBLite consensus disorder prediction 226 241 - -
Mtr6g0559 409 Pfam TCP family transcription factor 125 273 IPR017887 -
Mtr6g0559 409 MobiDBLite consensus disorder prediction 185 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0559 Mtr-Chr6 6709010 6711649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0559 67 274 TCP Transcription Factor Family AT1G67260 38.498 5.52e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mtr6g0559 TCP 8.4e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0559 - - cam:101499957 501.516