Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0554 ATGACAGTTCCAAATTCAATTAGCTTAAAATTTTCAATACTCATAATCATACTACTTGCATTTGAGGCTAGTGATACTATAGCTATATCATTTGCTGAGGTAAAAGTTACTATTGTTAATAAGGTATTGGCTCCAACTCCCACAAACATCACTTTTCATTGTAAATCTAGAGATGACGATCTTGGATTTCACACACTCGTGTCTGAAGGAAGTTACGCGTTTACATTCTCGCCGAATTTTACTCCATGGTTTAGTAAAACGTTATTCTTCTGCAGTTTTACATGGCCTGGAAACCCTCAACTTCATTATCTTGACATCTACGATCAAGTTCGTGACAACTGCTATCGTTGCAGATGGACAATAAACAAAGATGGAGGTTGTTTGAACACACATAAGTGTTATAAGTGGAACAGTGTCAAATTAATGGATGCATAA 435 0.3586 MTVPNSISLKFSILIIILLAFEASDTIAISFAEVKVTIVNKVLAPTPTNITFHCKSRDDDLGFHTLVSEGSYAFTFSPNFTPWFSKTLFFCSFTWPGNPQLHYLDIYDQVRDNCYRCRWTINKDGGCLNTHKCYKWNSVKLMDA* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0554 144 PANTHER - 10 136 IPR010264 -
Mtr6g0554 144 Pfam Plant self-incompatibility protein S1 35 136 IPR010264 -
Mtr6g0554 144 PANTHER S-PROTEIN HOMOLOG 18-RELATED 10 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0554 Mtr-Chr6 6630067 6630501 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0554 36 141 Carbohydrate Esterase AT3G16970 40.678 7.62e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0554 - - mtr:MTR_6g016935 139.428