Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0553 ATGACAACTCCAAGTACAATTATCTTAAAATGTTCAATACTCCTAACTACACTACTTGCATTTGAGGCCAGAGAGACTATAGCTTACAGTTTTGCTTATAATGTAACAATTTTTATTTACAATAAGGTATTGGCTCCAACTCCCGCAGACATCACTGTTCATTGCAAATCTAAAGATGACGATCTTGGAGATCACACACTCATGCCTGGAGAAAGCTATGTGTTTTCATTCAAACCAACACATCTTCCATTTAAAAATACTTTATTCTTCTGCAGTTTTACATGGCCTGGAAACCCGCATCGACATTATCTTGACATTTACGACGAAGCGCATGACGAATGCAAACATTGCTCATGGGATATAAACGTAAATGGAGGCTGTTTGAATGATGGTAAGTGCGTCCCTTGGAAAAGTATCGCGTTCATGGAATCATACAACACTTCAAAGTGGCCAGGGGAGAAGGGATTGCATGAATTGGCTCATGGCCACCCTCTAACCTAA 501 0.3972 MTTPSTIILKCSILLTTLLAFEARETIAYSFAYNVTIFIYNKVLAPTPADITVHCKSKDDDLGDHTLMPGESYVFSFKPTHLPFKNTLFFCSFTWPGNPHRHYLDIYDEAHDECKHCSWDINVNGGCLNDGKCVPWKSIAFMESYNTSKWPGEKGLHELAHGHPLT* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0553 166 Pfam Plant self-incompatibility protein S1 37 131 IPR010264 -
Mtr6g0553 166 PANTHER S-PROTEIN HOMOLOG 18-RELATED 10 136 - -
Mtr6g0553 166 PANTHER - 10 136 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0553 Mtr-Chr6 6611385 6611885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0553 35 141 Carbohydrate Esterase AT3G16970 36.134 5.89e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0553 - - mtr:MTR_6g016935 187.193