LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr6g0545	ATGACTTTTTCCTTTGGAAATGAGTTTCCAGCCAATGTTAAAGTTCTTGTGATTGATCATGATATTGATCTTCTCAATGCTATTGACAAAACATTGTCTCAATTCAATTACCAAGTTACAACATGCTCGACGGTTTCTTCAGCCTCGAATTTGATAGCACAAAAGGTGCATTTTGATTTGGTACTACTTGAAACTCAAATGCCGGACATGGATTCATTTGATTTCTTGCAACAATTGACACAACAAGTCAATATTCCTGTCATTATGACGATGTGTTCTGAAGGATCAACAAATTATGGAATAATCAAGGCCATTGAAAATGGAGCTTGTGACTGTTTTGTCAAGCCATTCGCTGAAAATCAAGTAAAGTATATGTGGCATCATGCTGTTAGGAAAATGATGAAAGGAAATAAAAAGCATAAAATCAATGAGCAATTGGGGGTTGAAGGTAGCCAAATAAGGGCAAGAGATGATTCAAATTTACCCTTAAAAGATGCAACATCGGAAAAAGGGTAA	516	0.3566	MTFSFGNEFPANVKVLVIDHDIDLLNAIDKTLSQFNYQVTTCSTVSSASNLIAQKVHFDLVLLETQMPDMDSFDFLQQLTQQVNIPVIMTMCSEGSTNYGIIKAIENGACDCFVKPFAENQVKYMWHHAVRKMMKGNKKHKINEQLGVEGSQIRARDDSNLPLKDATSEKG*	172

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr6g0545	171	MobiDBLite	consensus disorder prediction	151	171	-	-
	Mtr6g0545	171	Gene3D	-	8	138	-	-
	Mtr6g0545	171	SUPERFAMILY	CheY-like	12	146	IPR011006	-
	Mtr6g0545	171	Pfam	Response regulator receiver domain	15	122	IPR001789	GO:0000160
	Mtr6g0545	171	PANTHER	TWO-COMPONENT RESPONSE REGULATOR	9	164	IPR045279	GO:0009736
	Mtr6g0545	171	PANTHER	TWO-COMPONENT RESPONSE REGULATOR ARR14	9	164	-	-
	Mtr6g0545	171	SMART	REC_2	13	126	IPR001789	GO:0000160
	Mtr6g0545	171	ProSiteProfiles	Response regulatory domain profile.	14	130	IPR001789	GO:0000160

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr6g0545	Mtr-Chr6	6508548	6509217	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr6g0545	4	132	Response Regulator Gene Family	AT4G16110	36.923	4.09e-22	90.5

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Others	Mtr6g0545		Response_reg	3.9e-15	CL0304

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr6g0545	-		K14491	mtr:MTR_6g016850	347.436