Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0511 ATGTCAATCACATTTTTCACAAACATGAACGACATTGAGACACTTCTTAATGCACCAAAAAACACCAATAGCACACACAGCAAAAGATGGCACAATGCTTTCATGAAAATATATTGCTCTAGGGCTTTCATGTCACATTTTACCAAGAAACCAAAAATCACACCTACTCCATCTTTCACCGTGGTTGATTTAAATTTACCACACTCTTTTACCATTGATCAAGAAACTCTCATAGATATTGTCAAAGAGAAAAACATTGATACACTTCAAAATCATGGTGGAGTTGAAGGTGTTGCTTCATCACTTAAAACCAACATTGAGTTTGGTATCAAAAGTGATGATACTAATGATTTTGAAGATATTGCAATTAGGAAACAAGTGTTTGGTTCCAACACTTACAAAAAACCACCTTCTAAGAGTTTCATTCATTTTGTTATTGAAGCTTTTAAGGATGTTACAATTCTAATCCTTTTGGTTTGTGCTACACTTTCACTTGGCTTTGGTATCAAGCAACATGGAATCAAAGAAGGTTGGTATGATGGTGGTAGCATTTTCCTAGCTGTTTTCATCGTTATTTCGATGTCATCAATAAGCAACTTCAAACAAAACAAACAATTTGATAAATTGTCTCAAGTTAGCAATGACATTCAAATTGATTTGGTTCGAAGTGGTCGTCGGCTAAAGGTATCTATATTTGATATTGTTGTTGGTGATGTTGTTTGTTTGAAGATTGGTGATCAAGTACCGGCTGATGGATTGTTCGTAGATGGACATTCGTTGAGAGTTGATGAATCGAGCATGACCGGTGAGAGTGATCATGTAGAGATAAATCAAAATTTTCATCCTTTTTTGCTTTCCGGGACAAAAGTTGTCGATGGATATGCAAAAATGCTTGTTACATCGGTCGGTATGAACACAACATGGGGACAAATGATGAGTTCGATAAGCAATGACATCGATGAGGAAACACCTTTGCAAACAAGGTTGAATAAGCTAACATCATCGATCGGAAAAGTTGGTTTGGTTGTCGCGTTTTTAGTCCTGGTTGTTCTCTTGGTTCGATATTTCACCGGGAATACAAAGACTGATGCCGGAGTTAGAGAATTCAATGGTAGAAAGACGAGTTTTGATGATGTGATGAATGCAATTATTGGAATTATTGCTGATGCTGTTACTATTGTTGTTGTTGCAATTCCTGAGGGTTTGCCATTAGCTGTGACATTGACACTTGCATATTCAATGAAGAAAATGATGGCTGATGAAGCAATGGTGAGAAAACTCTCTGCATGTGAGACTATGGGATCTGCTACTACTATTTGCACCGACAAAACAGGTACACTTACTTTGAATCAGATGAAGGTGACAAAGTTTTGGCTCGGTTTTGAACCATTGGAAGAAGGTGCATATTCCAATGTTGATCCATCTGTTCTTCAATTGATCAAAGAAGGAGTTGCTCTCAATACAACTGGTGATGCTCACAAATCGAAAACAGGTTCGGATTCTGAATTTGAGTTTTCAGGAAGTCCAACAGAAAAAGCAATACTATCTTGGGCTGTTTTGGAGTTGAAAATGGATATGGAGCACTTGACAAAAAGTTGTTCTATTATTCAAGTTGAGACTTTCAACTCAAAGAAGAAAAGAAGTGGAGTTTTGTTGAGAAGGAATGTTGACAACAAAGCTTTTGCACATTGGAAAGGAGCAGCCGAGATGGTACTAAGAATGTGTTCAAGATACTATGATGGTTATGGAATTTTGAAAGATCTTGACAATGAATCTATGCTGAAATTCGAAAGCATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGCATCGCTTTAGCGTGTACAGAAGTCTCAGACGAAAAGCTAGGACATGAAGGAGACAACACCAAGATGGTGGTAAAAGAGAATGATTTAACATTGTTAGGACTTGTCGGCATTAAGGATCCATGTCGCCCAGGGGTGAAGACAGCGGTGGAAGCTTGCCAACATGCCGGTGTGAATGTCAAAATGATTACAGGTGACAATGTTTTCACTGCGAAAGCTATAGCATTTGAATGTGGAATTCTTCAACCTAATCAGGACATAGATGAAACGGTGGTTGAAGGCGAACAATTTCGCAACTTTACGCACGAAGAGAGATTAGAAAAGGTTGAAAAAATATGTGTGATGGCAAGATCATCTCCATTTGACAAACTTCTAATGGTTCAATGCTTAAAACAAAAAGGTCATGTAGTTGCTGTAACAGGAGATGGAACAAACGATGCACCGGCATTGAAAGAAGCCGATATCGGACTTTCAATGGGAATTCAAGGTACTGAAGTTGCAAAAGAGAGTTCAGATATTGTTATATTAGATGACAATTTTGCATCTATCGTAACAGTGTTAAACTGGGGAAGATGTGTTTACAACAACATTCAAAAATTCATTCAATTTCAACTAACAGTGAATGTGGCAGCCCTTGTTATCAATTTCGTTGCGGCGGTTTCAGCCGGTGAAGTACCATTAACAGCAGTTCAATTATTATGGGTGAATTTGATTATGGATACATTAGGTGCTTTGGCTCTTGCAACTGAAAAACCTACTAAGGAATTAATGGATGAAAAACCAGTTGGTAGAACAAAGCCTCTTATTACTAACATTATGTGGAGGAATCTTGTGTCACAAGCTTTGTACCAAATAATAATTTTGTTAACTCTTCAATTCAAAGGTGAGGATATTTTTGGTGTGACATCAAAGGTAAATGACACATTGATTTTTAATACATTTGTTCTATGTCAAGTGTTTAATGAGTTTAATGCAAGGAAATTGGAGAAAAAGAATGTCTTTGAAGGAATATTCAAGAGCAAGTTGTTTTTGGGAATTATTGGTGTGACATTGGTGCTTCAAGTTGTGATGGTTGAGTTTTTGAAGAAGTTTGCTGGTACAGAAAGGTTGAATTGGAGAGAATGGATTATTTGTATTGGTTTTGGTGCTGTTTCTTGGCCAATTGGTTTTCTTGTGAAGTTGATACCTGTTTCAGATAAACCACTTCTTGATTTTTTGCTTATGAAGAAGACTTAG 3063 0.3709 MSITFFTNMNDIETLLNAPKNTNSTHSKRWHNAFMKIYCSRAFMSHFTKKPKITPTPSFTVVDLNLPHSFTIDQETLIDIVKEKNIDTLQNHGGVEGVASSLKTNIEFGIKSDDTNDFEDIAIRKQVFGSNTYKKPPSKSFIHFVIEAFKDVTILILLVCATLSLGFGIKQHGIKEGWYDGGSIFLAVFIVISMSSISNFKQNKQFDKLSQVSNDIQIDLVRSGRRLKVSIFDIVVGDVVCLKIGDQVPADGLFVDGHSLRVDESSMTGESDHVEINQNFHPFLLSGTKVVDGYAKMLVTSVGMNTTWGQMMSSISNDIDEETPLQTRLNKLTSSIGKVGLVVAFLVLVVLLVRYFTGNTKTDAGVREFNGRKTSFDDVMNAIIGIIADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADEAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGFEPLEEGAYSNVDPSVLQLIKEGVALNTTGDAHKSKTGSDSEFEFSGSPTEKAILSWAVLELKMDMEHLTKSCSIIQVETFNSKKKRSGVLLRRNVDNKAFAHWKGAAEMVLRMCSRYYDGYGILKDLDNESMLKFESIIQGMAASSLRCIALACTEVSDEKLGHEGDNTKMVVKENDLTLLGLVGIKDPCRPGVKTAVEACQHAGVNVKMITGDNVFTAKAIAFECGILQPNQDIDETVVEGEQFRNFTHEERLEKVEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASIVTVLNWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTKELMDEKPVGRTKPLITNIMWRNLVSQALYQIIILLTLQFKGEDIFGVTSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFEGIFKSKLFLGIIGVTLVLQVVMVEFLKKFAGTERLNWREWIICIGFGAVSWPIGFLVKLIPVSDKPLLDFLLMKKT* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0511 1020 SUPERFAMILY Calcium ATPase, transduction domain A 218 314 IPR008250 -
Mtr6g0511 1020 SMART Cation_ATPase_N_a_2 91 169 IPR004014 -
Mtr6g0511 1020 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 72 1006 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mtr6g0511 1020 SUPERFAMILY Calcium ATPase, transmembrane domain M 93 1006 IPR023298 -
Mtr6g0511 1020 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 383 460 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr6g0511 1020 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 721 830 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr6g0511 1020 SUPERFAMILY HAD-like 438 854 IPR036412 -
Mtr6g0511 1020 CDD P-type_ATPase_Ca_PMCA-like 124 882 - -
Mtr6g0511 1020 Gene3D - 450 650 IPR023299 GO:0000166
Mtr6g0511 1020 Pfam Cation transporter/ATPase, N-terminus 92 164 IPR004014 -
Mtr6g0511 1020 SFLD p-type atpase 422 802 IPR044492 -
Mtr6g0511 1020 PRINTS P-type cation-transporting ATPase superfamily signature 263 277 - -
Mtr6g0511 1020 PRINTS P-type cation-transporting ATPase superfamily signature 440 454 - -
Mtr6g0511 1020 PRINTS P-type cation-transporting ATPase superfamily signature 643 654 - -
Mtr6g0511 1020 PRINTS P-type cation-transporting ATPase superfamily signature 665 675 - -
Mtr6g0511 1020 PRINTS P-type cation-transporting ATPase superfamily signature 749 768 - -
Mtr6g0511 1020 PRINTS P-type cation-transporting ATPase superfamily signature 773 785 - -
Mtr6g0511 1020 Gene3D - 147 1000 - -
Mtr6g0511 1020 Pfam Cation transporting ATPase, C-terminus 834 1004 IPR006068 -
Mtr6g0511 1020 ProSitePatterns E1-E2 ATPases phosphorylation site. 442 448 IPR018303 -
Mtr6g0511 1020 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 447 647 IPR023299 GO:0000166
Mtr6g0511 1020 Pfam E1-E2 ATPase 218 418 - -
Mtr6g0511 1020 PANTHER CALCIUM-TRANSPORTING ATPASE 20 993 - -
Mtr6g0511 1020 Gene3D - 120 316 - -
Mtr6g0511 1020 PRINTS H+-transporting ATPase (proton pump) signature 596 614 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr6g0511 1020 PRINTS H+-transporting ATPase (proton pump) signature 749 765 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr6g0511 1020 PRINTS H+-transporting ATPase (proton pump) signature 781 806 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr6g0511 1020 PANTHER CATION TRANSPORTING ATPASE 20 993 - -
Mtr6g0511 1020 Pfam haloacid dehalogenase-like hydrolase 437 763 - -
Mtr6g0511 1020 Gene3D - 437 794 IPR023214 -
Mtr6g0511 1020 SFLD Haloacid Dehalogenase 422 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0511 Mtr-Chr6 6187599 6191201 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0511 12 1019 Primary Pumps ATPases AT3G22910 66.830 0.0 1292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0511 K01537 - gmx:100793918 1607.42