Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0504 ATGCAAACAAGAGAAGTAACAACTGGACTCAATTACATGCTCCCATCAAACACATCACCTTATCTACAAAACTATAACAACATGATTCAAAACAATAACATTTCCTCATATCAACTCCAAAAATTCTCTAACCAAATATATGGTAATTACCTAAACACCCCTCATCAACAATTTCCTGACTTCAACTATAGTCCACAATCATCATGCATAAGCAGCAACTCAACTTCTGATGAAGCAGATGAACAAAACCTTAGTCTCATCAATGAGAGGAAACACAGAAGGATGATATCAAACCGCGAATCAGCGCGTCGTTCACGCATGAGGAAGCAGAAACACCTTGATGAGCTTTGGTCACAAGTTCTTTGGCTAAGGAATGAAAATCATCAACTTATAGAGAAACTTAACCATGTTTCTGAGAATCATGATCAAGTTGTTCAAGAGAATGCTCAGCTTAAAGAAGAAGCTTTGGAACTTCGACAAATGATAAAAGATATGCAGATTCATAGTCCTTTAATCCCTTCTTTTAGTCCTTTGGATGATACATATCTTAGAGATGATTCTTCAAACAATTCCATCTCAAGTTCAATGGATCTTCTTGGTTGA 603 0.3632 MQTREVTTGLNYMLPSNTSPYLQNYNNMIQNNNISSYQLQKFSNQIYGNYLNTPHQQFPDFNYSPQSSCISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIEKLNHVSENHDQVVQENAQLKEEALELRQMIKDMQIHSPLIPSFSPLDDTYLRDDSSNNSISSSMDLLG* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0504 200 Coils Coil 134 168 - -
Mtr6g0504 200 Gene3D - 88 143 - -
Mtr6g0504 200 PANTHER BZIP TRANSCRIPTION FACTOR 1 200 - -
Mtr6g0504 200 CDD bZIP_plant_GBF1 91 142 IPR045314 GO:0003700|GO:0006355
Mtr6g0504 200 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 151 IPR004827 GO:0003700|GO:0006355
Mtr6g0504 200 Pfam bZIP transcription factor 90 142 IPR004827 GO:0003700|GO:0006355
Mtr6g0504 200 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 93 108 IPR004827 GO:0003700|GO:0006355
Mtr6g0504 200 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 200 IPR044521 -
Mtr6g0504 200 SUPERFAMILY Leucine zipper domain 90 140 IPR046347 GO:0003700|GO:0006355
Mtr6g0504 200 SMART brlzneu 86 150 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0504 Mtr-Chr6 6062109 6063079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0504 65 171 bZIP Transcription Factor Family AT3G30530 74.545 8.23e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr6g0504 bZIP_1 3.8e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0504 - - gmx:100791105 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0504 6 6062109 6063079 Mtr6g0504 6 6062109 6063079 ECH
Mtr6g0504 6 6062109 6063079 Mtr7g0385 7 6004929 6005818 PCT