Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0503 ATGTCTCGTTATTCCTCTTCAAATCCCTTCGCAACAATAACAACTAACTCACTATATTCCGATTCCGACACCGATTCGCTGAGTCAATTCGTCACCGATCTCTACCAAAATCGTTCCCCCACCGACCCATCTTGTCCTTGGGACGACGAAGAAGATACACGCATAAACCCTTTCTCCAACATCGCTGATTTTCATCAAGGTGAACCAGAATTAGGTTTAGGGTTAGGGTTTGATGTTGAATATGAATATGAAAATGAAACTCAATATAATGATGATAATTATGATGATGTTTTTGATTTTTCTTCATTAGTTGGGGGTGGTGGTGATTCTGGTGGGCTTAGGGTTGTTGAATTTGGTACCGATTCGGAATCGAGTGGGAATGATGAAGAATTTGATTATGGTGGGGAGAATGATGATGAGAGGGTTAGTGGGTTGTGTTGGGATAGTCTTTGTTTGGAAGATGATCATAGGAGTGTTTTGAATGATTGGGAGGAAGTGATTGAAGGGAGGGTCAATGAGAATGAGATTGAAGAAGCTTCTTCTAGTTTGTTAATTGATGAGGTTGAGGTTGATGTTGATGTTAATGTTGAGGTTGAGATTGATGAACAATCGATGGAGTCGGGGTTTGAGGGGGAAGAAGATGAAGCCGGGGAAGAGGCGTTGAGGTATTTGGAATGGGAGATCTTATTGGCTTTTAATAATTTAGAGAGGAATGGTGGATTGGAACATGAAGATGAGAGTTTGAATAATTTGTATTTAGCTGTTCATGATGGGATTATATCGGGGAATACGGATTATGACATTCTTTTCGGACAGTTATTGGAGAATGACAGTGGTTTGAAGGGTAGTCCACCAGCGGCAAAGAGTTTCGTGGAGAATTTACCGTTGGTGGAGTTGACTGAGGAGGAGTTGAAAGAAAAGGATGTTGTGTGTGCTGTTTGTAAAGACGAGGTAACGGTGGAAGAGAAGGTTGGGAAGTTGCCTTGCTCACATTGTTACCATGGTGATTGTATTTTGCCGTGGTTGAATATTCGGAATACTTGTCCTGTTTGTCGGTATGAGTTACCAACGGATGATGATGATTACGAGCAGAGTAAGGTTCGTAGGGTGGCTCGTGATCTGTTGGACTTTGATGCATAG 1140 0.4175 MSRYSSSNPFATITTNSLYSDSDTDSLSQFVTDLYQNRSPTDPSCPWDDEEDTRINPFSNIADFHQGEPELGLGLGFDVEYEYENETQYNDDNYDDVFDFSSLVGGGGDSGGLRVVEFGTDSESSGNDEEFDYGGENDDERVSGLCWDSLCLEDDHRSVLNDWEEVIEGRVNENEIEEASSSLLIDEVEVDVDVNVEVEIDEQSMESGFEGEEDEAGEEALRYLEWEILLAFNNLERNGGLEHEDESLNNLYLAVHDGIISGNTDYDILFGQLLENDSGLKGSPPAAKSFVENLPLVELTEEELKEKDVVCAVCKDEVTVEEKVGKLPCSHCYHGDCILPWLNIRNTCPVCRYELPTDDDDYEQSKVRRVARDLLDFDA* 380
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0503 379 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 2 379 - -
Mtr6g0503 379 CDD RING-H2_RNF126_like 311 352 - -
Mtr6g0503 379 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 2 379 - -
Mtr6g0503 379 Pfam Ring finger domain 311 352 IPR001841 -
Mtr6g0503 379 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 274 358 IPR013083 -
Mtr6g0503 379 ProSiteProfiles Zinc finger RING-type profile. 311 352 IPR001841 -
Mtr6g0503 379 SUPERFAMILY RING/U-box 298 359 - -
Mtr6g0503 379 SMART ring_2 311 351 IPR001841 -
Mtr6g0503 379 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr6g0503 Mtr-Chr6 6036466 6038225 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0503 226 366 C3H Transcription Factor Family AT3G02340 50.331 2.13e-45 159
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0503 - - gmx:100812037 321.242
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0503 6 6036466 6038225 Mtr6g0503 6 6036466 6038225 ECH