Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0496 ATGACAATCGGAGCTCTTGCACCTGATGCTCTTGTAGCTAATGCAAACCCAAGGAAGAAAAAGGAAGTTGTTGATGAAAATGCACCTTTGTTACCTATGTGTCAAGAAACAGATGCTGAGTTTCATGAATTCAATGGAGCTTCATTTCCTGGGGCTGTTTTCAATTTGTCCACCACAGTTATTGGTGCTGGGATCATGGGCTTGCCCGCTTGCGTCAAAAAGTTGGGAATGGTACCTGGTCTTCTTGCCATAATCCTAACAGCATTATTGACAGAGAAGGCAATTGAGTTCATGATCAGGTTTTCGAGAGCAGGGAATCTTTCTTCCTATGGAAGTCTTATGGGAGATACCTTTGGGAAATACGGAAAAGCACTGGTAGAGATATGTGTTATAATCACTAACGTTGGTATTCTGATTGTTTACATGATCATTATTGGTGATGTGATTTCTGGAACGACTTCAGGTGGAATTCACCATCCTGGTATCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTGGGCGCACATTTGTTGTTGTTTTTACAACACTTGCTGTGTTTGGACCTTTGGTCAGCTTAAAGCGAATTGATTCATTGAGATTCACATCTGCATTATCAATTGGATTAGCAGTTCTTTTTCTCGTCATTGCTGGGGGGATCTCAATTATCAAGATTATTAGTGGACGCATTGGGATGCCCAGACTCTTCCCTGTCATTACTGATGTAGATTCTGTTTTTGATCTATTCACTGTATTTCCTGTGCTGATGACAGCTTATATCTGTCACTACAATGTTCATAACATTGATAATGAACTGGAGGATTCCTCACGGATGCGTGGGGTTGTGCGTACTTCCCTTACTCTATGCTCTTCAGTATATGTACTGACAAGCTTCTTTGGGTTCCTTCTATTTGGTGAAGGAACTCTTGATGATGTGCTTGCCAATTTTGATACTGATTTTGGAATTCCTTTTGGTTCTGCTCTTAATGATGCTGTTCGTTTTAGCTATGTTGCGCATCTTGTGCTTGTATTTCCTGTAGTTTTCTATGCATTGAGGGTCAACATAGATGGTCTCATATTTTCCTCTTCGAGAAGGCCTTTGGTTGTTGATAACTTCAGATTTGCATCAATTACTATTGCCCTTGTTGGCACTATCTTCCTCGGGGCAAATTTCATACCTAGCATTTGGGTTATTTTCCAGTTCTCTGGAGCAACAGGTGCTGTTTGTATAGCATTCATATTTCCAGCTGCAATCACTTTGAGGGATCGATACAACATAGCAACTAAAAAAGACAAGATTATGTCTGTCCTTATGATAGTGATGGCGGTTTTTTCAAATGCTGTGGCTATATACAGTGATGTTTCTGCTTTGATCAACAAGAAGGAAACTTAA 1392 0.4052 MTIGALAPDALVANANPRKKKEVVDENAPLLPMCQETDAEFHEFNGASFPGAVFNLSTTVIGAGIMGLPACVKKLGMVPGLLAIILTALLTEKAIEFMIRFSRAGNLSSYGSLMGDTFGKYGKALVEICVIITNVGILIVYMIIIGDVISGTTSGGIHHPGILEGWFGVHWWTGRTFVVVFTTLAVFGPLVSLKRIDSLRFTSALSIGLAVLFLVIAGGISIIKIISGRIGMPRLFPVITDVDSVFDLFTVFPVLMTAYICHYNVHNIDNELEDSSRMRGVVRTSLTLCSSVYVLTSFFGFLLFGEGTLDDVLANFDTDFGIPFGSALNDAVRFSYVAHLVLVFPVVFYALRVNIDGLIFSSSRRPLVVDNFRFASITIALVGTIFLGANFIPSIWVIFQFSGATGAVCIAFIFPAAITLRDRYNIATKKDKIMSVLMIVMAVFSNAVAIYSDVSALINKKET* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0496 463 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 13 462 - -
Mtr6g0496 463 Pfam Transmembrane amino acid transporter protein 47 452 IPR013057 -
Mtr6g0496 463 PANTHER AMINO ACID TRANSPORTER 13 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0496 Mtr-Chr6 5932456 5939386 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0496 20 461 Amino Acid or Auxin Permease AAAP Family AT5G38820 62.864 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0496 K14207 - gmx:100791286 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0496 6 5932456 5939386 Mtr7g0382 7 5913996 5918739 PCT