Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0495 ATGTATTATTGTGATCATAAAAAGGACAACAACGATGGTAGAGCTGAGCATAGTTACATGGAAACTGACCCAACTGGTCGCTATGCCAAGGTTGGAGGTATTCTTGGAAAAGGGGCAATGAAAATAGTGTATAAAGCCATTGATAAGGTCCTTGGAATAGAAATAGCATGGAACCAAGTCAAACTCAATGAAGCACTTCGTACGCCAGAGGACTTAGAAAGGCTTTATTTAGAGGTTCATCTCCTCAGTAACCTCAAACACCAATCCATCATGCAATTCTATACCTCGTGGATTGATGTCGACAACCGAACTTTCAACTTCATTACAGAAATGTTCACTTCTGGAACACTTAGAGAATACAGGAAGAAATATAAGCATGTAGACATGCAAGCAATAAAGAGTTGGGTTCGCCAAATCTTACACGGTCTTGTTTATCTACATGAGCATGATCCTCCGGTAATTCATAGAGACCTCAAGTGCGATAACATATTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGTGACCTGGGTCTAGCAGCGATTCTTCGTGGTTCGCAGCCGGCACACAGTGTTATTGGAACTCCGGAGTTCATGGCACCAGAGTTGTACGAAGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTTTGGAAATTATGACATCAGACTATCCATATAGTGAGTGTACTAACCCGGCACAAATATACAAGAAAGTGACATCGGGTAAGCTACCAGCAACACTTTTCCGAATTGAAGATGCAGAAGCACGAGAGTTTATTGGAAAATGCCTAGTAAATGCAGCAAGGAGACCATCAGCAAAAGAACTGTTGCATGATCCATTTCTTGTGTCTGATGATGAATCATCGATAACAGTAAGTGGTATGCAGGATCCATTTTTAAACTACACTGAAATGGATAAACTTCAACTGAGGGGCGATTCAGCTAGGGCTTCAATGTCAATAACTAGGAAGCGAAATCCTGACGGTGATGCTCTCTTTCTCAAAGTGCAGATTGTTGACAAGAACGGTTCTGCTAGGAATGTATATTTCCCCTTTGACATTTTCACTGACACCCCAATTGATGTTGCGAAGGAGATGGTAAAAGAGTTGGACATCACAAATTGGGATCCTTCTGAAATTGCTACTATGATTGAAGCAGAGATATCAATGCTACTTCCAGATAGGACGAACAGTTATCAAGACGACGAGAATAATGCAAGTCCTCGTCGTTATCATCATTTTCCCTCTGTCTCTTCTGTTTCATCGTCACAAGAATCATTGTCGGGTGCAGTCAATAGAGTTGATGACATATCAAATGGATATCGCTGGCACCCTGATGATACGTTTGATTATGACAGCTCGTTATGCTCTTCATATACATATTCCGACTTGAATTTTTGTTCTGTGGACGACCAGTATCATAACGTGGCTTCTACAAGAAACAATAAACATCCCATCATGAGTCACAAGTGTACAAGGTTTTCACATGGTGAAGATCAACTCACTTTGAACCGGTGCAAAATTTTAGCTAAACCACAAGAACCTTCTACAAGTGAATGTGAGAGGATGATAGAGAATCGTATATTAACGAGGAATAAGTCACTAATTGATATGAGGAGCCAATTACTTCACCGATCACTTGTTGAAGAGGTAAACAAAAGACGGTTATTCAAGACAGTTGGAGCTGTGGAAGATATTGGATATCAAACACCTTATAAGATTAAAAGCAAAAAGTCACAACTGAGGAGTCAATAA 1770 0.4017 MYYCDHKKDNNDGRAEHSYMETDPTGRYAKVGGILGKGAMKIVYKAIDKVLGIEIAWNQVKLNEALRTPEDLERLYLEVHLLSNLKHQSIMQFYTSWIDVDNRTFNFITEMFTSGTLREYRKKYKHVDMQAIKSWVRQILHGLVYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEIMTSDYPYSECTNPAQIYKKVTSGKLPATLFRIEDAEAREFIGKCLVNAARRPSAKELLHDPFLVSDDESSITVSGMQDPFLNYTEMDKLQLRGDSARASMSITRKRNPDGDALFLKVQIVDKNGSARNVYFPFDIFTDTPIDVAKEMVKELDITNWDPSEIATMIEAEISMLLPDRTNSYQDDENNASPRRYHHFPSVSSVSSSQESLSGAVNRVDDISNGYRWHPDDTFDYDSSLCSSYTYSDLNFCSVDDQYHNVASTRNNKHPIMSHKCTRFSHGEDQLTLNRCKILAKPQEPSTSECERMIENRILTRNKSLIDMRSQLLHRSLVEEVNKRRLFKTVGAVEDIGYQTPYKIKSKKSQLRSQ* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0495 589 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 25 589 - -
Mtr6g0495 589 Pfam Protein kinase domain 32 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0495 589 Gene3D - 334 403 - -
Mtr6g0495 589 Gene3D Phosphorylase Kinase; domain 1 13 110 - -
Mtr6g0495 589 PANTHER WNK KINASE 25 589 - -
Mtr6g0495 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Mtr6g0495 589 SUPERFAMILY Protein kinase-like (PK-like) 30 288 IPR011009 -
Mtr6g0495 589 ProSiteProfiles Protein kinase domain profile. 29 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0495 589 SMART serkin_6 29 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0495 589 Gene3D Transferase(Phosphotransferase) domain 1 112 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0495 Mtr-Chr6 5923574 5926493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0495 19 587 MAP Kinase Kinase Kinase AT5G58350 56.424 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mtr6g0495 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0495 K08867 - gmx:100778102 852.818