Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0493 ATGACAATTGAAACTGAGAAGAAGAAAACAAGGAAGAACAAGGAAGTTGTTGATGAGAATGTGCCTTTGTTACCTAAGTCTCAAGAAAGCGATACCGAGTTACATGAATTTAATGGAGCTTCATTTTCTGGAGCTGTTTTCAATTTATCGACAACAGTTATCGGTGCTGGGATCATGGGCTTGCCTGCTTGTGTGAAGAAGTTGGGCATGGTGCCTGGTCTTATTGCTATAGTCCTAACAGCATTTTTGACAGAGAAGTCAGTTGAATTCATGCTCAGGTTTTCAAGGGCAGGGAATCTTTCTTCATATGGAAGTCTTATGGGGGATGCCTTTGGGAGATATGGAAAAGCAGTTTTAGAGATATGTGTTGTTATCAATAACGTTGGTGTTCTTATTGTCTACATGATTATCATTGGTGATGTGGTTTCTGGAACAACTTCAAGTGGAATTCACCATTCTGGTATCCTCGAAGGATGGTTTGGAGTCCATTGGTGGACTGGGCGTACATTTGTTCTTACCTTTACAACACTTGCTGTGTTTGCACCTCTGGTCAGCTTTAAGCAAATTGATTCTTTGAGATTCACATCTGCATTATCAGTTGGATTAGCAGTTGTTTTCCTTATCATTGCCGTAGGGATCTCAATTATCAAGATTATTAGTGGAGGCATTGGGATGCCAAGACTCTTCCCGGTCATTACTGATGCAGCTTCAGTTTTTGACCTATTCACCGTAGTTCCTGTGTTGGTGACCGCTTACATCTGTCACTACAATGTTCACAACATAGATAATGAACTGGAGGACTCCTCATGGATGCATGGCGTTGTGCGTGCTTCCCTTACTCTATGCTCTTCAGTTTACTTACTGACAAGCTTCTTTGGGTTCCTTCTATTTGGTGACGATACTCTTCCTGACGTTCTTGCCAATTTTGATACTAATCTCGGAATTCCTTTTGGTTCTGCGCTCAATGATGCTGTTCGTTTTAGCTATGCTGCGCATCTCGTACTTGTATTTCCTGTAGTTTTCTATGCATTGAGGGTCAACATAGATGGTCTGATATTTACCTCATCAAGAAGGCCTTTGGTTGTTGATAACTTACGATTTGCATCAATTACTATTGCGCTTGTCGGCATTATCTTCATGGGAGCAAACTTCATCCCTAGCATTTGGGATCTTTTCCAGTTCACTGGAGCAACTGCTGCTGTTTGTTTAGGATTCATATTTCCAGCTGCAATCACTCTGAAGGATCGACACAACATAGCAACCAAAACGGACAAGATTTTGTCCGTCTTTATGATTGTTCTGGCAGTCTTGTCAAATGCTGTGGCTATATACAGTGATGCTTATGCTTTGATCAACAAGAACAAACATAATGTGAATGATTTCTTGATTAGATAG 1395 0.4086 MTIETEKKKTRKNKEVVDENVPLLPKSQESDTELHEFNGASFSGAVFNLSTTVIGAGIMGLPACVKKLGMVPGLIAIVLTAFLTEKSVEFMLRFSRAGNLSSYGSLMGDAFGRYGKAVLEICVVINNVGVLIVYMIIIGDVVSGTTSSGIHHSGILEGWFGVHWWTGRTFVLTFTTLAVFAPLVSFKQIDSLRFTSALSVGLAVVFLIIAVGISIIKIISGGIGMPRLFPVITDAASVFDLFTVVPVLVTAYICHYNVHNIDNELEDSSWMHGVVRASLTLCSSVYLLTSFFGFLLFGDDTLPDVLANFDTNLGIPFGSALNDAVRFSYAAHLVLVFPVVFYALRVNIDGLIFTSSRRPLVVDNLRFASITIALVGIIFMGANFIPSIWDLFQFTGATAAVCLGFIFPAAITLKDRHNIATKTDKILSVFMIVLAVLSNAVAIYSDAYALINKNKHNVNDFLIR* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0493 464 Pfam Transmembrane amino acid transporter protein 40 445 IPR013057 -
Mtr6g0493 464 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 3 454 - -
Mtr6g0493 464 PANTHER AMINO ACID TRANSPORTER 3 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0493 Mtr-Chr6 5905500 5910235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0493 11 454 Amino Acid or Auxin Permease AAAP Family AT3G30390 67.265 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0493 K14207 - gmx:100791286 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0493 6 5905500 5910235 Mtr6g0493 6 5905500 5910235 ECH