LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr6g0471	ATGGACATTGTTGGAGCGATCCTAGGAGGTTTCAAAGAGGGTTTAATAGATGTTTTAAAATTTGGTCCCACCCGTGCCTCTGAAACAAACACAGAGACTTTGGACAGAGAGACTTTGGACAGAGGATTGTTAAGGAGCAATGACGTGTTCTTAAGTTTTCGAGGGGAAGACACCCGTGCTTCAATCGTTTCACATCTATATGCTTCTCTTCTAAATGCTGGAGTTTTCGTTTTTATGGACGATGATTCACTTCCAAGAGGAGATCACATTGCAACATCACTACTACAAGCAATCGAAGAGTCTATAATTTCTGTTATAGTTTTCTCAAAAAACTATGCAGATTCGTCGTGGTGTTTGAATGAGTTGGTTAAAATAATGGAGTGTCGCAGAACTATAGGGCAGATAGTGTTGCCGGTGTTCTATGATGTTGATCCTTCAGATGTACGACACCAAACAGGTGAGTTTGGAAAAGCGTTCCAAAGTCTCTTGAGCAGAATTTCAAAGAAGACAGACAAGTCGCTGAAATGGAGAGACGCGCTTAGTGAGGTTGCTGGGCTTGCTGGCTTTGTAGTTCCAAATTTCAGGAACGAAAGTGAGGCTATAAAAGATATTGTCAAAAAAGTTGTGCGTTTGCTAGACAAGAAAGACTTGTTTGTTGCTAATCATTCAGTGGGAGTTGAACCTCGAGTGCAAGATATGATGCAATTGTTAGATAAAGAAATACAGCAAGATGTAGGCTTTGAATATTCAGAAGATATAGACTTTGAATATTTTGAAGATATACTTCACCTGCCAGACATCCAACAATCATCCCTACAAAAAAAAGACATCCAACAATCTAATAATGTTCGACTAATAGGGATGTGGGGCATGGGAGGAATTGGCAAAACCACCATTGCAAAAGCCATTTACAATAAAATTGGCCGCAATTTTGAAGGAAGGAGCTTCCTTGCAAATATAAGGGAAGTTTGGATGCAAAATGTTGGACAAGTATCTTTACAGCAACAACTTCTCTCCGATATTTGCAAAGAAACAACGACCAATATACAAAACATTGATGCAGGAAAAAATACATTAATGGATAGACTCTGCCATAAAAAGGTACTTATTGTACTGGATGATGTGAGTACATCTGATCAATTGAATGCTTTGTGTGGATCTTGTGAATGGTTTGGTCCCGGCAGTAGAATAATTATAACAACTAGAGATAAGCATATACTTAAAGAGATAGGAGTTTACCAAGTATATGAAATGAAAGAGATGAATGAAAATGAATCAATGGAGCTCTTTAGTTGGCATGCTTTCAAGCAAGCAAGACCCAAGAAAGATTTTGCTGCATTGTCCAAAAATGTAGTTGAGTATTCTGGGGGATTGCCACTAGCTTTGGAAGTCCTTGGGTCACATTTATTTGACAGGATGGTAACAGAATGGGAGAGCGTATTGAACAAACTCAAAGCAATTCCTAATCATCAAGTACAAAAAAAGTTAAGAATAAGCTATGATGGTTTAAGTGATTATACGGAGAAAGAAATATTCCTTGACGTGGCTTGTTTCTTTATTGGGATGGTTCGAAATGATGTTGTACATATATTAGATGGTTGTGATCTTTATGCAGGAATTGGAATAAATGTCCTTGTGGAGCGAAGCCTTGTGACTGTTGATGATAGGAACAGGCTTAGAATGCATGATTTGTTGCGAGATATGGGAAGAGAAATCGTTCGTGAGAAATCGCAAAAAAATATTGATGAGTGTAGCAGGTTGTGGTCTAGTAAGAATGTGCTTCATGTATTATCAAAACGAACGGGAACAAAAGTTGAGGGACTGAGTTTGAAGTTGCCAAGAGCTAATGTACAATGTTTTAATACTGAAGCATTTGAGAAGATGGAAAAACTGAGATTGTTTCAACTTGCTGGAGTAGAACTTGATGGGAATTTTGATAAACTTTCAAAAAATCTGAGATGGTTTTCTTGGGATGGATTTCCTTTAACATCCATCCCTTCAAGCTTTTATCAAGGAAATTTAGTTTCCCTTGAGTTAGAAAACAGCAACGTCAAATTTCTATGGAAAAAGGCACAGATGATGGAGAAGCTTAAAATTCTCAATCTTAGTCACTCTCATTATCTGACACAGACCCCAGACTTTTCAATCATGCCTAATCTTGAAAAGCTAATACTCAAAGATTGTCCAAGGTTGCGTGAGGTTTCCCATAGCATTGGACATCTCGACAAAATTCTTCTGATAAATTTGGAAGATTGTATTAGCCTTTCTAACCTTCCAAGAAGCATCTATAAGTTGAAATCTCTGAAAACTCTCATTCTTTCCGGGTGTTCAATGATTAACAAGTTGGAAGAGGACTTGGAACAAATGGAATCTTTAACCACTCTGCTTGCAAATGACACTGGAATAACAAGTGTGCCCTTTTCAATTGTAAGGTCAAAAAGCATTGGGTATATTTCTCTGTGCGGACATGAAGGATTCTCACGTGATATATTTCCATCTATCATTTGGTCTTGGATGTCACCAACAAGTGCTCTTTCATCCCCCTTTGAAACATCTGCTGCCATGTCATCTCTTGTTTCTTTAGATATACCATGTAGTAGTTCTCAGGAACTGTCATCTATTTCCAACCACCTTTCAAGGCTTCGAAGTCTATGGGTAGAGTGTGGTTCAGAACTTCAACTTTCTGAAGATGCAAAAATCATTTTGGATGCTTTATACGCCACAATTTCTAAGGAAATGGATTCGACTTCAGCTACTTCTAAAGTATCAAACATGAAAACTTCTGCATTAGTTCAACACTGCAGTCAATTGCGTGCTTTCGAATCAAAAAATTTGTTGAAGTCTGTTCTGTTACAACTGGGAATGAATTCCGAAGTCACCAATAATCTGAAAGAAAACATTTTAAAGAATATGGATGAGAATGGGTGTGGTGGTTGTTTGTTTCCTAGTGATAGTTGTCCAGATTGGTTAACCTTCAATTGCGAAGGTTCTTCGGTAATGTTTGAAGTCCCTCAAGTGGAAGGGCGCACTTTAAAGACATTGATGATATGCATCGACTATTCTACAACCCTGGATAACATAACATCAAATGGCCTTGCAAACTTGTTGGTGAAGAATTACACAAAAGCCACCATTCAGCTTTATAAGAGCGAGGCATTAGTCTCCTTTGAAGATGAAGAGGGACAGAGAGTAGTATCAAGTATAGAACCTTGTAACAAAGTGGAGGTTGTTTCTGTTTTTGAGAACGGTTTCATTGTGAAGAAAACAACAGTTTATCTCGTATATGATGAACCAATTCGTGAAAATATGGAGCAATGTCAAGAACAAGAAGAAAATGATATTGTGTGTAGTAGTGGTGATGAAGATGAATGCTATTAA	3378	0.378	MDIVGAILGGFKEGLIDVLKFGPTRASETNTETLDRETLDRGLLRSNDVFLSFRGEDTRASIVSHLYASLLNAGVFVFMDDDSLPRGDHIATSLLQAIEESIISVIVFSKNYADSSWCLNELVKIMECRRTIGQIVLPVFYDVDPSDVRHQTGEFGKAFQSLLSRISKKTDKSLKWRDALSEVAGLAGFVVPNFRNESEAIKDIVKKVVRLLDKKDLFVANHSVGVEPRVQDMMQLLDKEIQQDVGFEYSEDIDFEYFEDILHLPDIQQSSLQKKDIQQSNNVRLIGMWGMGGIGKTTIAKAIYNKIGRNFEGRSFLANIREVWMQNVGQVSLQQQLLSDICKETTTNIQNIDAGKNTLMDRLCHKKVLIVLDDVSTSDQLNALCGSCEWFGPGSRIIITTRDKHILKEIGVYQVYEMKEMNENESMELFSWHAFKQARPKKDFAALSKNVVEYSGGLPLALEVLGSHLFDRMVTEWESVLNKLKAIPNHQVQKKLRISYDGLSDYTEKEIFLDVACFFIGMVRNDVVHILDGCDLYAGIGINVLVERSLVTVDDRNRLRMHDLLRDMGREIVREKSQKNIDECSRLWSSKNVLHVLSKRTGTKVEGLSLKLPRANVQCFNTEAFEKMEKLRLFQLAGVELDGNFDKLSKNLRWFSWDGFPLTSIPSSFYQGNLVSLELENSNVKFLWKKAQMMEKLKILNLSHSHYLTQTPDFSIMPNLEKLILKDCPRLREVSHSIGHLDKILLINLEDCISLSNLPRSIYKLKSLKTLILSGCSMINKLEEDLEQMESLTTLLANDTGITSVPFSIVRSKSIGYISLCGHEGFSRDIFPSIIWSWMSPTSALSSPFETSAAMSSLVSLDIPCSSSQELSSISNHLSRLRSLWVECGSELQLSEDAKIILDALYATISKEMDSTSATSKVSNMKTSALVQHCSQLRAFESKNLLKSVLLQLGMNSEVTNNLKENILKNMDENGCGGCLFPSDSCPDWLTFNCEGSSVMFEVPQVEGRTLKTLMICIDYSTTLDNITSNGLANLLVKNYTKATIQLYKSEALVSFEDEEGQRVVSSIEPCNKVEVVSVFENGFIVKKTTVYLVYDEPIRENMEQCQEQEENDIVCSSGDEDECY*	1126

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr6g0471	1125	Gene3D	-	262	414	IPR027417	-
	Mtr6g0471	1125	Pfam	TIR domain	48	210	IPR000157	GO:0007165
	Mtr6g0471	1125	PANTHER	RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED	53	1095	-	-
	Mtr6g0471	1125	ProSiteProfiles	TIR domain profile.	45	212	IPR000157	GO:0007165
	Mtr6g0471	1125	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	53	1095	IPR044974	GO:0006952
	Mtr6g0471	1125	SUPERFAMILY	Toll/Interleukin receptor TIR domain	47	189	IPR035897	-
	Mtr6g0471	1125	PRINTS	Disease resistance protein signature	285	300	-	-
	Mtr6g0471	1125	PRINTS	Disease resistance protein signature	362	376	-	-
	Mtr6g0471	1125	PRINTS	Disease resistance protein signature	455	469	-	-
	Mtr6g0471	1125	PRINTS	Disease resistance protein signature	763	779	-	-
	Mtr6g0471	1125	Coils	Coil	779	799	-	-
	Mtr6g0471	1125	Pfam	NB-ARC domain	278	497	IPR002182	GO:0043531
	Mtr6g0471	1125	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	229	514	IPR027417	-
	Mtr6g0471	1125	Gene3D	-	420	504	IPR042197	-
	Mtr6g0471	1125	Gene3D	Ribonuclease Inhibitor	607	757	IPR032675	-
	Mtr6g0471	1125	Gene3D	Ribonuclease Inhibitor	758	901	IPR032675	-
	Mtr6g0471	1125	SUPERFAMILY	L domain-like	560	886	-	-
	Mtr6g0471	1125	Gene3D	-	45	218	IPR035897	-
	Mtr6g0471	1125	SMART	till_3	46	186	IPR000157	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr6g0471	Mtr-Chr6	5627258	5632393	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr6g0471	48	809	WRKY Transcription Factor Family	AT4G12020	30.867	8.83e-84	298

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr6g0471	-		-	cam:101494533	1429.46