Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0469 ATGGGTTCTGTTTGTTGTTGTTTGAGCTTTGATGATTATGAAGATTATGTAAATCCAAATAGTACTGTGTATAGGAATTGCCCGTGTCTCAGTTGCTTGGTTCAGAATCTTTTGAATGTGTATGCATCAATATTTCGTAGAGGGGAAGCACATTCAGTTCCTTCATCTCTTCAGGGGACAGCGTCCATGACTTCTGCCGCATCACTTGATAATTCTCTATCTGACATGTACCGTTCTCCTCCAAGGCCTTTACCTTATGATGCAGAGCCTCGGTTTTTCCGCTCGCAGCGTGATGGACTAGTTTCAAGGCGTGAGAAAAGTTCAAGCCATTCAAATGACGAAACTGAACCTCTAAGAAGTGACACAGATGTGGATCCAGAACCTTTACATTCATCAGAGAAATGGAATGAATGTGCCTGTGAAGATGAATCAAAGATATACCGTTCTAAGTCCGCATTAAAACTTTCATCAGCAAAATATACAACCGGAGTTGGACTCATTTATGCATCGTCGGAAGACGAGGATATTTGTCCAACTTGTCTTGAAGAGTACACTAAAGAGAATCCAAAGATAATGACAAAATGCTCTCATCATTTTCACCTTGGTTGCATCTATGAGTGGATGGAGAGAAGTGACAATTGTCCAGTTTGTGGGAAGGAAATGGATTTCGATGAAACGACGTACACTTGA 690 0.4101 MGSVCCCLSFDDYEDYVNPNSTVYRNCPCLSCLVQNLLNVYASIFRRGEAHSVPSSLQGTASMTSAASLDNSLSDMYRSPPRPLPYDAEPRFFRSQRDGLVSRREKSSSHSNDETEPLRSDTDVDPEPLHSSEKWNECACEDESKIYRSKSALKLSSAKYTTGVGLIYASSEDEDICPTCLEEYTKENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKEMDFDETTYT* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0469 229 ProSiteProfiles Zinc finger RING-type profile. 177 217 IPR001841 -
Mtr6g0469 229 MobiDBLite consensus disorder prediction 98 131 - -
Mtr6g0469 229 Pfam RING-H2 zinc finger domain 174 217 IPR024766 GO:0008270
Mtr6g0469 229 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 226 - -
Mtr6g0469 229 SMART ring_2 177 217 IPR001841 -
Mtr6g0469 229 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 226 - -
Mtr6g0469 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 226 IPR013083 -
Mtr6g0469 229 SUPERFAMILY RING/U-box 172 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0469 Mtr-Chr6 5599915 5605986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0469 1 226 C3H Transcription Factor Family AT5G15790 58.009 2.46e-92 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0469 - - gmx:100777068 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0469 6 5599915 5605986 Mtr6g0469 6 5599915 5605986 ECH