Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0465 ATGAATAGTAATATAACAAGAGAACCAGGCTTATATGTCTCAGTTGCACAAATAGATGCTACAACCTTCAATGTTTGTTCTGTTGCTCCACCAAATATTGTTTCAGATGGAATATGGGGCGGCCCAGATAGTAGAAGGAATCCAATGAAGTCTGCACTTCCTGTGTTTGAGATGCAGCTTCTTGTGATTTTTACTATCACACAAATATGCAATTTCTTCCTAAAACGTTTGCATTTCCCTGCATTTATTGCACCAATGCTGGTTGGCCTAATTCTAGGCCCTTCAATTCAACATGCGGAATTTGACAAATACAAGAAGCTATTGTTTCCATATGGAAGTCAAGACATACTTGCAACAATATCATTAATTGGTTATGTGCTTTACATCTTTACCATTGGTGTGCAAATTGATTTGAGCATGGTAACCAGAACAGGACACAAGGTTTGGACCATTGCAATAATGGGATTTGTCGTGCCTATACTGTTTAGTTTTGTGCCTCAATTTGTGGTGTTACTAGAAAAATATTATCGATTCGAAGATGTGACTAAACCACATTTGATTGTAGATATTTATAGGGTGGTAAGAATACATAGCTCGGTTGCATTCGCAGTCACTGCTACACTCCTCAATGAACTTAAAATTCTTAACTCCGAACTCGGAAGATTGGCATTATCATCAGCAATGGTGACTTCTATCTTAGGACTGTCTCTTCAATGTATTGGTAATGTCCTAGAACAACAAGAATCACACATGAGGATAATATTTGGGATGTCATTGCTTGCTTTAGTTGTCTTTGCTCCATTAATTTTTCGGCCATTAATGTTTTGGATCATCAGACATACTAAAGAAGGAAGACCTGTGGATGATGGTTACATCTATGGTATCATTTTAATGGTACTAGGTTTAGGTTGGTTTGCAGGTTACATAAACCAAGAGTTTGCATTAGGTGCATATGTTTTGGGGTTAGCTGTGCCAGACGGACCTCCATTAGGATCTGCATTAGTTAGGAAGCTTGAATTCTTTGGGACAAGTTTGTTGCTGCCAATATTTATGACTTGTTGTGTGATGAAGGCAGATTTGTCTTTGCCATATACATTAAATGCATCTATTGGTTTTGGTATCATCATTTGCTTTACACACATTGTCAAAGTAATAGCATACCTTATATCTTGCCTCATTTGCAAAATCCCCTTCAAAGATGCCTTGACTCTTGCCCTCATTTTGAATGCCAAAGGAGAAGTGGATCTTGCAAAACTTTCATTTTCATATGATGACAAGCATTCTCATAAGTGTTTATGCAAATCATATTCAAAAATTTCATTTGTGTATATGCATGGGATGCAGTCTTTTGCTGGCCAAATTTATGCAGTGAATGTAATCAGCATAATGGTCGTAGCTTGCATAGTAAAATGGTCTGTGAAGATATTGTATGATCCATCAAGAAAATATGCCGGCTACCAAAAAAGGAACATCATGAGTTTAAAACCCGACGCAGAACTGAGACTACTTGCTTGCATTCACAAACAATACAACATATCAGCTATAATAGACGCCCTTGACGTTTTTTCTCCAACAACAGAAAAACCTTTCATTGTGGATGCATTGCATCTTATTGAGTTAGTTGGAAGGTCATCCCCAATTTTCATCTCCCATCGTCTTCAAAAAACAGTTTCGGGTTCTCGCAAGTCTTACTCAAATGATGTCATTCTTGCTTTGGATCTCTATGAACATGACAACTATGGTGGAGTAACCACACACACTTACACCGCCATATCTCCACCAACCCTTATGTATGAAGATGTTTGCCAACTTGCATTGGACAAAGTCGCGTCTATCATAATTCTCCCATTCCATAGAAGATGGACTATTGATGGTGCCATTGAATCTGATGACAAGAACATAAGATCCTTAAACTGCAAGGTACTGGAAATAGCTCCATGCTCAATAGGAATCCTCGTGAGTCGATCTTCCTTAAAAAATAATTCACCCGTCAAGCTAGCCATGATTTATCTTGGGGGAAGAGACGACAGAGAAGCTTTGTGCTTAGCTAAAAGAGCGATAAGGAACCCGGGGATCAACTTGGTTGTGTACCACCTTACATCTGAGGATGATCACATGTCAAACTTGGAGTATCTACTTGATAATGAGGCACTCGAAGAAGTAAAGAAACTACCACATTATGGCTCGAAAAATGTTTGTTATAAAAAATTGATTGTAAATAATAGTCCAGGGACATCAACTGTTCTTCGCGATATAGCGAATGAACATGACTTTTTTATTGTTGGAAGAACACATGACTCAGACTTGCCTCTGATAGAAGGACTAACAAAATGGATTGAATTTTCAGAGTTAGGTGTCATTGGTGATTTGCTTGCTTCACCAGATCTTGGGAGTAGAGCTGGTGTTTTGGTAGTGCAACAACAAGTCAAAGACAAATAA 2439 0.3821 MNSNITREPGLYVSVAQIDATTFNVCSVAPPNIVSDGIWGGPDSRRNPMKSALPVFEMQLLVIFTITQICNFFLKRLHFPAFIAPMLVGLILGPSIQHAEFDKYKKLLFPYGSQDILATISLIGYVLYIFTIGVQIDLSMVTRTGHKVWTIAIMGFVVPILFSFVPQFVVLLEKYYRFEDVTKPHLIVDIYRVVRIHSSVAFAVTATLLNELKILNSELGRLALSSAMVTSILGLSLQCIGNVLEQQESHMRIIFGMSLLALVVFAPLIFRPLMFWIIRHTKEGRPVDDGYIYGIILMVLGLGWFAGYINQEFALGAYVLGLAVPDGPPLGSALVRKLEFFGTSLLLPIFMTCCVMKADLSLPYTLNASIGFGIIICFTHIVKVIAYLISCLICKIPFKDALTLALILNAKGEVDLAKLSFSYDDKHSHKCLCKSYSKISFVYMHGMQSFAGQIYAVNVISIMVVACIVKWSVKILYDPSRKYAGYQKRNIMSLKPDAELRLLACIHKQYNISAIIDALDVFSPTTEKPFIVDALHLIELVGRSSPIFISHRLQKTVSGSRKSYSNDVILALDLYEHDNYGGVTTHTYTAISPPTLMYEDVCQLALDKVASIIILPFHRRWTIDGAIESDDKNIRSLNCKVLEIAPCSIGILVSRSSLKNNSPVKLAMIYLGGRDDREALCLAKRAIRNPGINLVVYHLTSEDDHMSNLEYLLDNEALEEVKKLPHYGSKNVCYKKLIVNNSPGTSTVLRDIANEHDFFIVGRTHDSDLPLIEGLTKWIEFSELGVIGDLLASPDLGSRAGVLVVQQQVKDK* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0465 812 Pfam Sodium/hydrogen exchanger family 62 427 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr6g0465 812 Gene3D - 56 433 IPR038770 -
Mtr6g0465 812 PANTHER EXCHANGER, PUTATIVE-RELATED 14 427 - -
Mtr6g0465 812 PANTHER EXCHANGER, PUTATIVE-RELATED 437 811 - -
Mtr6g0465 812 PANTHER CATION/H + ANTIPORTER 14 427 - -
Mtr6g0465 812 PANTHER CATION/H + ANTIPORTER 437 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0465 Mtr-Chr6 5560472 5563501 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0465 25 808 Antiporter Super Family AT5G22900 35.399 1.40e-149 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0465 - - mtr:MTR_8g085260 1358.2