Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0458 ATGAAGCTTGTTATATCATCTTTTTGTGTTCTTGTATTAGTCTCTTATGCAGTTGCTTATGATCCTTTGGATCCAAATGGAAATATAACAATCAAATGGGATGTTATGTCTTGGACACCAGATGGTTATGTGGCGACGGTAACAATCCACAATTTCCAAATGTTTCGACACATAATGAATCCGGGATGGACCTTAGGATGGACATGGGCTAAGAAAGAAGTTATATGGTCAGTGACAGGAGCTCAAACCACAGAGCAAGGAGATTGTTCAAAGTTCAAAGGCAATATACCTCATTGCTGCAAGAAAATCCCTACAGTTGTAGACCTTCTCCCTGGTGTACCTTACAATCAACAGTTCTCAAACTGTTGTAAAGGCGGAGTCGTTGCAGCATGGGGACAAGATCCTGCAGAAGCTATATCAGCTTTTCAAGTTAGTGTTGGACAAGCAGGTACCTCAAACCGAACGGTTAAACTTCCGAAGAATTTCACTCTTTTGGCTCCTGGACCTGGTTACACTTGTGGCCCTGCAAAGGTTGTTCCTTCCACCAATTTCCTTACACCTGATAGGCGCCGAAAGACACAAGCATTGATGACATGGAATGTTACCTGCACATACTCACAGTTTCTAGCAAGAAAGAATCCAAGTTGCTGTGTATCTTTATCATCCTTCTACAATGAAACTATTACACCTTGTCCCCATTGTGCATGTGGCTGCCAAAACAAGAAAAACTGCGTAAAGAGTGAATCTAAGATTCTGAGCATGGTGGGAGTTCATACTCCAAAGAAAGACAATGAACCATTGATGCAATGCACTCATCACATGTGCCCAATTAGGGTTCACTGGCATGTGAAGACAAACTATAAGGACTATTGGCGAGTCAAAATCGCAGTAACAAATTTCAATTACAGGATGAATTACTCTCTCTGGAGTCTTGCAATTCAACATCCAAATCTTAACAATGTCACACAAGTTTTCAGCTTCAACTACAAGCCACTTGTTCCCTATGCATCCATAAATGACACTGGCATGTTCTATGGAATGAAATACTTCAATGATCTACTAATGGAAGCTGGACCAAAAGGAAATATTCAATCAGAGGTATTGCTTCAGAAAAACAAAGATACCTTCACATTCAAGCAAGGATGGGCATTTCCTCACAAGGTTTACTTTAATGGTGATGAATGCATGCTTCCTCCACCTGATACATACCCTTTTCTCCCTAATTCTGCCCCTGCAAGACTAGTTACCTTTAAGGCACTCATCCTCTCATTATTTTTACTGCTAGCAGTTTGGTGA 1296 0.409 MKLVISSFCVLVLVSYAVAYDPLDPNGNITIKWDVMSWTPDGYVATVTIHNFQMFRHIMNPGWTLGWTWAKKEVIWSVTGAQTTEQGDCSKFKGNIPHCCKKIPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPAEAISAFQVSVGQAGTSNRTVKLPKNFTLLAPGPGYTCGPAKVVPSTNFLTPDRRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPHCACGCQNKKNCVKSESKILSMVGVHTPKKDNEPLMQCTHHMCPIRVHWHVKTNYKDYWRVKIAVTNFNYRMNYSLWSLAIQHPNLNNVTQVFSFNYKPLVPYASINDTGMFYGMKYFNDLLMEAGPKGNIQSEVLLQKNKDTFTFKQGWAFPHKVYFNGDECMLPPPDTYPFLPNSAPARLVTFKALILSLFLLLAVW* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0458 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0031225
Mtr6g0458 431 PANTHER PROTEIN COBRA 4 429 IPR006918 GO:0010215|GO:0031225
Mtr6g0458 431 PANTHER COBRA-LIKE PROTEIN 4 429 - -
Mtr6g0458 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0458 Mtr-Chr6 5491438 5494491 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0458 1 430 COBRA Gene Family AT3G29810 63.098 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0458 - - gmx:100798678 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0458 6 5491438 5494491 Mtr7g0335 7 5246362 5250658 PCT
Mtr7g0336 7 5250878 5254678 Mtr6g0458 6 5491438 5494491 PCT