Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0457 ATGATGTTCTTCCATTTCCTTAAACATTGTCCATGCATGTTTACGTTCCTGATATTTACACTGTTCTACACTTCAACAGAAGCTTATGATCCACTTGACCCAAATGGGAATATCACAATAAAATGGGATATCATAAGCTGGACAGCTGATGGTTATGTTGCCACCGTTACGATGAACAACTTCCAACAGTATCGTCATATATCGTCACCTGGATGGTCATTAGGATGGACATGGGCAAAGAAAGAGGTAATATGGAACATGGTAGGAAGTCAGACAACTGAACAAGGAGATTGTTCGAAATTTAAAGGAAACATCCCGCATTGCTGTAAAAAAGATCCAACGGTCGTAGATTTACTTCCCGGAACACCCTACAATCAACAAACTGCAAATTGTTGCAAAGGTGGAGTACTCAGCTCATGGGCACAGGATCCAACAAATGCAGTTGCGTCATTTCAGGTTATTGTTGGTAGAGCTGGCACGACCAATAAAACTGTCAAACTGCCGCAAAATTTCACCCTGAAAGCACCTGGACCAGGTTATACATGTGGACGAGCAAAAACTGGGACACCTACTAAATTTACAACACCAGACAAAAGGAGAGTGACTCAAGCACTTATGACATGGAATGTGACATGCACATATTCACAATTTTTAGCTCAACAAACTCCAACTTGTTGTGTTGCCCTCTCATCATTCTACAATGATACTATTGTACCCTGCCCGACATGTTCATGCGGCTGCCAAGGCAACTCACCTCAATCAGGAAGCTGTATAGATCCAAGTGCGTCGCATTTGGCATCGGTCGTTAATGGCTTTCCGAAAAATAGTATTACGCCTTTGGTTCAATGTACTAGTCATATGTGTCCTATCCGAGTTCACTGGCACATTAAGCTTAACTACAAGGAGTATTGGCGCGTAAAGGTTACTGTTACTAACTTCAATTACAGGATGAATTACTCAGATTGGAACTTGGTTGTTCAACATCCAAACTTTGACAATCTGACTCAACTTTTCAGTTTCAACTCAAAACCAATAACTCCTTACGGGTCGATAAATGATACAGCAATGCTTTGGGGAGTTAAATTCTACAATGATTTACTCATGCAAGCTGGTCCTATTGGTAATGTACAATCAGAGCTACTTTTCCGAAAGGATTCAAATTTTAATTTCGATAAAGGTTGGGCTTTTCCCCGAAGGATCTATTTCAACGGCGACAACTGTGTGATGCCACCACCTGATGCTTATCCATGGTTGCCTAATGCTGGTTCCAAACAAAAGGTTTCCTTCCTTGCTTTGGTGATGGCTTCGTTGGTAGCCTTGGTACTTCATGCATATTCTTAA 1341 0.4131 MMFFHFLKHCPCMFTFLIFTLFYTSTEAYDPLDPNGNITIKWDIISWTADGYVATVTMNNFQQYRHISSPGWSLGWTWAKKEVIWNMVGSQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQTANCCKGGVLSSWAQDPTNAVASFQVIVGRAGTTNKTVKLPQNFTLKAPGPGYTCGRAKTGTPTKFTTPDKRRVTQALMTWNVTCTYSQFLAQQTPTCCVALSSFYNDTIVPCPTCSCGCQGNSPQSGSCIDPSASHLASVVNGFPKNSITPLVQCTSHMCPIRVHWHIKLNYKEYWRVKVTVTNFNYRMNYSDWNLVVQHPNFDNLTQLFSFNSKPITPYGSINDTAMLWGVKFYNDLLMQAGPIGNVQSELLFRKDSNFNFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSKQKVSFLALVMASLVALVLHAYS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0457 446 PANTHER COBRA-LIKE PROTEIN 3 445 - -
Mtr6g0457 446 PANTHER PROTEIN COBRA 3 445 IPR006918 GO:0010215|GO:0031225
Mtr6g0457 446 PIRSF COBRA 1 446 IPR006918 GO:0010215|GO:0031225
Mtr6g0457 446 Pfam COBRA-like protein 52 215 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0457 Mtr-Chr6 5486635 5491128 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0457 2 444 COBRA Gene Family AT3G02210 71.840 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0457 - - gmx:100783820 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0457 6 5486635 5491128 Mtr6g0457 6 5486635 5491128 ECH
Mtr7g0335 7 5246362 5250658 Mtr6g0457 6 5486635 5491128 PCT