Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0455 ATGGCTGCTCCCGAAATCAACTGGGACAGGTTAGATAAAATAAAATACTATGTAGTGGGAGCTGGACTCTTTTCGGGTGTTACTGTGGCACTCTACCCTGTCTCTGTTGTGAAGACTAGGATGCAGGTTGCTTCAAACCATACTGCAGAGAGAAGTGCATTGTCTGTTGTGAAAGGATTACTCAAGACAGATGGCATTCGTGGTTTGTATAAAGGGTTTGGCATTGCCGTCACCGGAGCAATTCCTGCCAGAATCATATTTCTCACTGCCTTGGAGACCACAAAGGCGGCTTCCTTCAAGATGCTTGAACCATTTAAACTATCTGAAACTACACAGGCTGCCATAGCAAATGGCATTGGTGGCATGACATCGTCGATCTGTGCACAAGCTGTGTTTGTTCCAATTGACGTGATTAGCCAAAAGTTGATGGTGCAAGGGTACTCAGGCCATGCCCAGTATAGTGGGGGCTTGGATGTTGCTCGTAAGTTGATAAGGTCTGAGGGAATTCGGGGGTTATACCGTGAGTTTGGTCTATCTGTCATGACTTATTCGCCATCTAGTGCTGTTTGGTGGGCAAGTTACGGCTCAAGTCAACGCTTCTTATGGAGATTCTTAGAAGACGATGTCAAATCTGAGAAAGGTACTCCTAGTCTGCCAAAGATTGTTTTGGTTCAGGCAGCAGGGGGTATCATTGCTGGTGCTACTGCATCGTGCATTACAACTCCGTTGGATACAATCAAGACTCGGTTACAGGTGATGGGACATGGAAAGAAAAGCTCTGTTAAACAAGTTGTTAAAGAATTGATCAGTGAGGATGGTTGGAAAGGTGTCTATAGAGGATTAGGTCCAAGATTTGTCAGCATGTCAGCATGGGGTACTTCAATGATACTGGCTTACGAATATCTGAAGCGCCTATGCGCAAAAGATGAAGAAGCGTTTGGTCAGCAATCTGGTATTGTTTCAACTGATTAG 972 0.4506 MAAPEINWDRLDKIKYYVVGAGLFSGVTVALYPVSVVKTRMQVASNHTAERSALSVVKGLLKTDGIRGLYKGFGIAVTGAIPARIIFLTALETTKAASFKMLEPFKLSETTQAAIANGIGGMTSSICAQAVFVPIDVISQKLMVQGYSGHAQYSGGLDVARKLIRSEGIRGLYREFGLSVMTYSPSSAVWWASYGSSQRFLWRFLEDDVKSEKGTPSLPKIVLVQAAGGIIAGATASCITTPLDTIKTRLQVMGHGKKSSVKQVVKELISEDGWKGVYRGLGPRFVSMSAWGTSMILAYEYLKRLCAKDEEAFGQQSGIVSTD* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0455 323 SUPERFAMILY Mitochondrial carrier 9 302 IPR023395 -
Mtr6g0455 323 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 311 - -
Mtr6g0455 323 PRINTS Mitochondrial carrier protein signature 26 44 IPR002067 GO:0055085
Mtr6g0455 323 PRINTS Mitochondrial carrier protein signature 70 88 IPR002067 GO:0055085
Mtr6g0455 323 PRINTS Mitochondrial carrier protein signature 121 143 IPR002067 GO:0055085
Mtr6g0455 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 12 97 IPR018108 -
Mtr6g0455 323 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 1 311 - -
Mtr6g0455 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 220 305 IPR018108 -
Mtr6g0455 323 Pfam Mitochondrial carrier protein 21 99 IPR018108 -
Mtr6g0455 323 Pfam Mitochondrial carrier protein 115 202 IPR018108 -
Mtr6g0455 323 Pfam Mitochondrial carrier protein 224 309 IPR018108 -
Mtr6g0455 323 Gene3D Mitochondrial carrier domain 17 317 IPR023395 -
Mtr6g0455 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0455 Mtr-Chr6 5471312 5476436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0455 6 310 Chloroplast and Mitochondria Gene Families AT5G15640 74.593 2.43e-165 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0455 K15121 - gmx:100819519 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0455 6 5471312 5476436 Mtr6g0455 6 5471312 5476436 ECH
Mtr6g0455 6 5471312 5476436 Mtr7g0334 7 5209632 5218317 PCT