Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0453 ATGGCACAACATGAAGAATCATTCAAAGTTGTTCAAAATTGCAATATTGAACCTTTAATTGACACAACAAAACCTTTTCCATCACCAACCTCACTTCCACTCACTTTCTTTGATCTTTTATGGTTAAGATTTCCACCAGTTGAACGTCTCTTCTTCTATGAACTCACAAACTCGACAACTTTTTTCTATGAAACTCTTCTTCCAAATCTCAAACACTCACTTTCACTCACACTTCAACACTTTCTCCCTCTTGTTGGTAACATAACTTGGCCTAGTGATTCATCCAAACCAATCATAAACTATGTTAAGGGAGATTCTATTTCTTTCAATGTTGTTGAGTCCAAAGCAAGTTTCAAAGATCTTTCTTCTCATCATTGTGAAGCTTCAAAAAGACATCATTTGATACCCCTATTGAAAAATTCTCATGAAAAGGCTTCTTTGCTTGCAATACAAGTTACTTTGTTTCCAAACAATGGTTTTTGCATTGGAATAACAACACACCATGCTGCTTTAGATGGAAAATCTTCAACCACTTTTATGAAATCATGGTCTTATGTTGCATGTTCTAATTCTAACCTTGATTCATCTTTCTTATCTTTACCTGAAAATCTAACACCTTTATTTGATAGATCATTGATAGAAGATCATCATAGTGGAATTAGTGAAGCATATGTTGATGCATTGATGAAACATGGTGGACCAAATAATAGAAGTCTCAAGATTATGAATTTTTCTAGTCCAATGAAACATGATGTAGTTAAAAGTTTGTTTGAATTGACACCTTCAAATATTCAAAAGCTTAAAGAACATGGAAAAAATGATATGAAAATGAATGTTATAAATTTGTCAACTTTTTTAGTTACAAGTGCTTATGTTTTGGCATGTTTAGTAAAGGCACAACAACCTAAGGTTGAAAAAGTGATTTTCATATTTGCTATAGATTGTAGATCAAGGTTGGACCCTTCAATTTCTACTATGTATATTGGTAATTGTATTGCAGGAAAAAAGATTGTGTTTGAGACAAAGAACTTAGTTGGAAAAAATGGATTTGTAAATGCTTTAGAAGGAATAAATAAAGCTTTGAATAGTGTGAAAGATGTTGGCGTGTTAAATGGAGCTGAAAATTGGGTTTCTAATATGTCTAGTGGAATGGAAGGTAAAATTTACTCTATTGCTGGATCACCAAGGTTTGAGTTTTATAGTATTGATTTTGGATTTGGAAAGCCAAAAAAAGTTGATATGACTTCAACTGATAAATCAGGAGCATTTTCTCTTAGTGAAAGTAGGAATAACAATGGTGGAATTGAGATTGGTTTGGCTTTAAGTAAGGAAGAGATGGAAGCTTTTTCTACCCTTTTTGTTCAAGGACTTGAATCCATTTAA 1383 0.3247 MAQHEESFKVVQNCNIEPLIDTTKPFPSPTSLPLTFFDLLWLRFPPVERLFFYELTNSTTFFYETLLPNLKHSLSLTLQHFLPLVGNITWPSDSSKPIINYVKGDSISFNVVESKASFKDLSSHHCEASKRHHLIPLLKNSHEKASLLAIQVTLFPNNGFCIGITTHHAALDGKSSTTFMKSWSYVACSNSNLDSSFLSLPENLTPLFDRSLIEDHHSGISEAYVDALMKHGGPNNRSLKIMNFSSPMKHDVVKSLFELTPSNIQKLKEHGKNDMKMNVINLSTFLVTSAYVLACLVKAQQPKVEKVIFIFAIDCRSRLDPSISTMYIGNCIAGKKIVFETKNLVGKNGFVNALEGINKALNSVKDVGVLNGAENWVSNMSSGMEGKIYSIAGSPRFEFYSIDFGFGKPKKVDMTSTDKSGAFSLSESRNNNGGIEIGLALSKEEMEAFSTLFVQGLESI* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0453 460 Gene3D - 249 460 IPR023213 -
Mtr6g0453 460 Gene3D - 8 233 IPR023213 -
Mtr6g0453 460 Pfam Transferase family 21 450 - -
Mtr6g0453 460 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 3 460 - -
Mtr6g0453 460 PANTHER - 3 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0453 Mtr-Chr6 5463251 5464928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0453 50 455 Monolignol Biosynthesis Gene Families AT5G48930 25.527 6.25e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0453 - - cam:101513090 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0453 6 5463251 5464928 Mtr7g0333 7 5201211 5203369 PCT