Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0450 ATGAAACCATTGATTAACTTCAAAACCATAATCATCACCCTCTTATACTTTTCCATCTCCCTCGTACACCTTCAAGCTTATGACCCAATTGAACACTTTACCGTCAGTTGTGGCGCAACAGGAAACTCTACCGACGGACAAAGAACATGGACAGGAGACATAAACTCAAAACTTTTGTCATCATTACAAAACAATCCAACAACAATTTCTGTTCCAAAAACAACACAAAATCCTTCTAGCAACAAAGTTCCATATTCAACAGCTCGTTTATCACACTCAATATTCAACTATTCTTTACCCGTCAGTAAAGGTCCTAAATTCCTCCGTCTTTTTTTCTACCCTACTACTTATACCAACGGTTTTAACCGTTATGATGCTTCTTTTACCGTTATTTCTAATGGTTTCACACTTCTTAAGGATTTTAATGCTTCATTAAACGCTGATGTTGAAGGTGTTGTTACTATATTGAAAGAATATGTTATTAACGTTGGTGATGATCAAAGGCTTGATTTGAGTTTTATTCCAAGTAATAATAATTATGGTTTTATTAATGGAATTGAAGTCTTATCCATGCCTGATGATCTATATTATACACCTGATCCTGAATTTTCACTTGTGGGGGCCACTAATACACAGTACAATGTTCCTACTAGTGCTGCACTTGAGACAGATTACAGGATCAGAGTTGGAGTGCAAGATAACTCACCAAACATTCCAGACATAGGCATGTTCAGAAACTGGAACATCAATGACTCAACCTATTTAAGAACACCAACAGCAATTGACTTTGTCCCAGCAGACATATCAGGTACGAGGAATATCACTGTAACACCTGATTACATAGCACCAAAAGACCTCTTCAAATCATCACGTGACTTAGGAACCAATGCTACTCTCAACAGACTCTTGAACCTAACATGGGAATTCCCCGTTGATTCCGGCTTCACTTACTTCATCAGGCTCCATTTTTGTGAACTCGACCCCAACATAACTCGTGCAGGTGATAGAGTCTTCACTATTTATTTACAAGGAAATGTGGCTGTAGAACAAGCTGATGTTTTGAAATGGACACAAAATCAAAAAGGTCTTGCTGTGCAACGAAACTACGCAGTTTTGATTCCAAAGAGTGAAAGTAATAGTAACAAAAAAGTTAACCTAACAATTCAAATGCATCCTTTTGGTAATGGTGATAGTCGATACACAAAATTCAGTGACCCTTTTTTAAATGGCCTTGAAATTTTCAAAATCAGTGAGATCAGTTCGAAGAATCTAGCTGGACAGAATCCTGATCCGGTTCAGAATCCGGTTCAAGAGAAGAATAGCAAAAAAAGCATAAATGGAACGACAATAATTGGCGTTGCTTTAGGAGTTGTATTTGGTTTAGTTTTACTTTCCATTGTCGTTTTCTTCCTTTACAGAAGAAAACGACAAACAGAAGAGAAAAACTCTAAAACCACAAAAGATTCGAAGTCTTCGACGACTTCAAAGTGGGGTCCATTGTCATTTGCAACAACAACAAAATCAACAAATTCAAACACATCTCTACCATCGGATCTCTGCCGGAGCTTCTCCCTTCTAGAGATTCGTGCTGCCACAAACAACTTCGACGAACTCTTCATTGTCGGAGTTGGAGGATTCGGCCATGTGTACAAAGGCTACATTGACAATGGTTCAACACAGGTTGCAATAAAACGGCTTAAACCGGGTTCACAACAAGGTGAAAATGAGTTCATCAATGAAATCGACATGCTCTCGAAGCTTCGTCATATTCATCTTGTTTCTTTGATTGGTTACTGCAACGAAAACAACGAAATGATCATTGTCTACGATTTCATGGCGCATGGAACTTTACGTGATCATCTTTATAATACTGAGAATCCTGCTTTATCGTGGAAACAAAGGTTGCAAATTTCAATTGGAGCGGCACGTGGGTTACACTACCTTCATACTGGTGCAAAGAACATGATTATTCACCGTGACGTGAAAACGACAAATATTCTGTTAGATGATAAATGGATAGCAAAGGTTTCCGATTTTGGGCTTTCGAGGATTGGGCCTATGGGTATTTCAAAAGCCCATGTTAGTACGGTTGTTAAAGGGAGTGTTGGGTATTTAGACCCGGAGTATTATAAACGTCAGCGTTTGACCGAGAAATCTGATGTTTACTCTTTTGGTGTTGTTTTGTTCGAGATACTGTGCGCAAGACCACCACTGATTAGAACCGCTGAAAAGAGACAGGTGTCGCTCGCTGATTGGGGGAGATATTGTCATAAAAATGGGATGTTGGGGAGTATTGTGGACCCGTCGGTGAAGTGGAGTATAGCACCGGAGTGTTTGAGGAAATTCGGGGAGATTGCAGTTAGTTGTTTGTTGGATGATGGAACCATGAGACCGTCGATGAATGATGTTGTTTGGATGTTGGAGTTTGCCTTGCAGTTACAAGAGAGTGCGGAAAAGCGTGAGCCTCAGGCTGTTCCGCACACTCTTGGTCGTGGGAATGATGACGTGGAAGGTGATAGAATAGATGAAAATGATAATGACGTGTTTAGTAGTGGGTCCGATGTAGGAATTGTTTCCGATTTTAACAAGACTAGTGCAGTGAGTGTGAGTACTATAAGTACCGGAAGTACTAGTGGAGATCATAGCTATGGTTATAACAGAGAAAGTGTTTTTTCTGAAATTATGGATCCAAAAGCACGTTGA 2703 0.3962 MKPLINFKTIIITLLYFSISLVHLQAYDPIEHFTVSCGATGNSTDGQRTWTGDINSKLLSSLQNNPTTISVPKTTQNPSSNKVPYSTARLSHSIFNYSLPVSKGPKFLRLFFYPTTYTNGFNRYDASFTVISNGFTLLKDFNASLNADVEGVVTILKEYVINVGDDQRLDLSFIPSNNNYGFINGIEVLSMPDDLYYTPDPEFSLVGATNTQYNVPTSAALETDYRIRVGVQDNSPNIPDIGMFRNWNINDSTYLRTPTAIDFVPADISGTRNITVTPDYIAPKDLFKSSRDLGTNATLNRLLNLTWEFPVDSGFTYFIRLHFCELDPNITRAGDRVFTIYLQGNVAVEQADVLKWTQNQKGLAVQRNYAVLIPKSESNSNKKVNLTIQMHPFGNGDSRYTKFSDPFLNGLEIFKISEISSKNLAGQNPDPVQNPVQEKNSKKSINGTTIIGVALGVVFGLVLLSIVVFFLYRRKRQTEEKNSKTTKDSKSSTTSKWGPLSFATTTKSTNSNTSLPSDLCRSFSLLEIRAATNNFDELFIVGVGGFGHVYKGYIDNGSTQVAIKRLKPGSQQGENEFINEIDMLSKLRHIHLVSLIGYCNENNEMIIVYDFMAHGTLRDHLYNTENPALSWKQRLQISIGAARGLHYLHTGAKNMIIHRDVKTTNILLDDKWIAKVSDFGLSRIGPMGISKAHVSTVVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLFEILCARPPLIRTAEKRQVSLADWGRYCHKNGMLGSIVDPSVKWSIAPECLRKFGEIAVSCLLDDGTMRPSMNDVVWMLEFALQLQESAEKREPQAVPHTLGRGNDDVEGDRIDENDNDVFSSGSDVGIVSDFNKTSAVSVSTISTGSTSGDHSYGYNRESVFSEIMDPKAR* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0450 900 Gene3D Single helix bin 436 476 - -
Mtr6g0450 900 MobiDBLite consensus disorder prediction 832 847 - -
Mtr6g0450 900 Gene3D Phosphorylase Kinase; domain 1 498 611 - -
Mtr6g0450 900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Mtr6g0450 900 ProSiteProfiles Protein kinase domain profile. 535 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0450 900 MobiDBLite consensus disorder prediction 818 851 - -
Mtr6g0450 900 Pfam Malectin-like domain 35 416 IPR024788 -
Mtr6g0450 900 Gene3D Transferase(Phosphotransferase) domain 1 612 830 - -
Mtr6g0450 900 Pfam Protein tyrosine and serine/threonine kinase 541 805 IPR001245 GO:0004672|GO:0006468
Mtr6g0450 900 PANTHER OS07G0166700 PROTEIN 17 846 IPR045272 GO:0004714|GO:0006468
Mtr6g0450 900 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 17 846 - -
Mtr6g0450 900 SMART serkin_6 535 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0450 900 ProSitePatterns Protein kinases ATP-binding region signature. 541 564 IPR017441 GO:0005524
Mtr6g0450 900 Gene3D - 220 417 - -
Mtr6g0450 900 Gene3D - 32 192 - -
Mtr6g0450 900 CDD STKc_IRAK 541 808 - -
Mtr6g0450 900 SUPERFAMILY Protein kinase-like (PK-like) 509 810 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0450 Mtr-Chr6 5427585 5432057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0450 18 900 Receptor kinase-like Gene Family AT3G51550 47.484 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mtr6g0450 Malectin_like 9.7e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0450 - - cam:101513730 1238.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0450 6 5427585 5432057 Mtr6g0450 6 5427585 5432057 ECH