Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0447 ATGTCTAAGTCTTCCTCATCAAATGTGCTTTCACGTGAGCCAGAAATAGCAAGGATCCATGACGTGTTCTTAAGTTTTAGAGGGAAAGATACTCGTGCTTCCTTCACTTCACATCTGTATGCTGCTCTTCAAAAGGCTGGAATTAAGGTTTTTATAGACGATAATGAGCTTCAAAGAGGATATCACATTTCATCATCATTATCACGAGCAATTGAACAATCTCAAATTTCTATAATTGTTTTTTCAAAAAATTATGCTGATTCGCGATGGTGTTTGAATGAATTGGTGAAAATAATGAATTGTCGTAAAAACATAGGACAAGTGGTTGTGCCAGTGTTCTACCGTGTAGATCCCTCTGAAGTGCGTAATCCGAGAGGAAAGTTTGGAATAGCTTTTCAACGTCTTTTGAAGAAAGTTCCAAAAAAGGAGAAATTGGTGCTAAGTTGGAAAAAGGCTCTTCGTGAGGCAGCAAACATCGCAGGGTTTCCAATAGTGAAGTCCGGGAATGAAAGTGAGGATGTCAAAGGTATTGTTGACAACATTTCACATTTGCTTAACAAAACAGACTTGTTTATTGCGAATAATCCAGTGGGAATTGAATCTCGAGTGAAAGATGTGATTCAACAGCTACACATCCAACCAAAGGGGGTTCTGCTAATAGGGATGTGGGGCATGGGGGGGATCGGAAAAACAACAATTGCAAAAGCCATTTACAATAAGACTGGCCGCAATTTTGAAGGCAGGAGCTTCCTCGCAAATATTAGGGAAAATGGAAAGAAAAATGCTGGACTCATGGGTTTACAAGAACAACTTTTATTTGATATCTGCAAAGAAAGAACAATCAAGATACCAAACATTGAGTTAGGAAAAAGCATGTTAAAAGATAAACTCAGCCATACAAGAGTACTTGTTGTACTTGATGATGTGAATACATTAGACCAACTTAATACTTTCTGTGCAAGTCGTGAATGGTTTGGCTCAGGGAGTATAATAATAATCACAACCAGAGATATGCATTTACTTAAAGGGAGAGTTGACAAAATATTCGAAATGCCAATAATGAATGAAAGTGAGTCAATCGAGCTTTTTAGTTGGAATGCATTCAAGCGAGCGTGTCCTACAAAAGATTTTGTTAGAATTTCCAAAAATGTAGTTGAATATTCTGAGGGATTGCCGCTAGCTCTTGAAGTCCTTGGGTCTTATTTGTTTAATAAGACGGAATCAGAGTGGGAACTTGTATTGGAGACACTCAAAAGAATTCCTTATGATCAAGTGCAGAAGAAGTTAAGGATGAGTTATGATGGTTTAAATCATGCTGAGAAAGAAATATTCCTTCACATTGCTTGTTTCTTTGTCGGGATGGACCAAAATGATGTTATACTTTTATTAAATGATTGCGGACTTTCTGCAGAAATTGGAATAAGTGTCCTTGTTGCTCGAAGCCTTGTGACTGTTGATGATAAGAACATGCTTGGAATGCATGGTCAGCTGCGAGATATGGGAAGAGGAATCGTTTGTGAGGAATCACCAAGGAGGCCTGAGAAACGTAGTAGGTTGTGGGATCAGGAGGATGTGATTGATGTATTATCAAGACAAACTGGAAAAAAAGGTATTTTGGGACTGGCTTTGAAATTGCCTACAACTAATGCAAAATGTTTTAGTACTAAAGCATTTGAAAAGATGAAGAGACTCAGATTTCTTCAACTTGCTGAGGTAAAACTTGATGGAGATTTTGAATATGTTTCGAGAGATCTAACATGGCTGTCATGGAATGGATTAAGCGACATCCCTACAAACTTCTTTCGAGAAAATTTAGTTTCCATCGAGTTAGAGAATAGCAATTTGGAAGTTCTGTGGAAGAAGAGCATGAGGATGGAGAAGCTAAAAATTCTCAATCTTAGCCATTCGCACTATCTCACACAAAGCCCTGACTTTTCAAACACGCCTAATCTTCAAAAACTAGTACTCAAAGATTGCCCACTGTTGTCTGAGGTTTCACCTAGCATCAGACATCTCAATAAAATTCTTCTGATAAACTTGGAAGACTGCATTAGCCTATGTAGCCTCCCAAAAAGCATCTATAAGTTGAAATCTTTGAAAACTCTCGTTCTTTCTGGTTGTTTAAAGATTGACAAGGTGGAAGAGGACTTCGAGAAAATGGAATCTTTAACCACTCTTCTTGCAAATAACACTTCAATAACAACAATACCCTTATCAATAAGGATGGAAAATCTGAAAAATCTCAATCTTAGTCATTCTCATCGTCTGACAAACATCCCGGACTTTTCATGCTTGCCTAATCTTGAAAAGCTAGTACTCAAAGATTGTCCAATGTTGTCTGAGGTTTCTCCTAGCATTGGACATCTCAATAAAATTCTTCTGATAAATTTGGAAGATTGTATTGGCCTAGGTAACCTCCCAAGAAGCATCTATAAGTTGAAATCTTTGAAAACTCTCATTCTTTCTGGTTGTTTAAAGATTGACAAGCTGGAAGAGGACTTGGAACAGATGGAATCTTTAACCACTCTGCTTGCAAATAATACTTCAATAACAACAGTGCCCTTTTCGGTAGTTAGGTCGAAGAGCATTGGATATATTTCTTTGTGCGGATTTGAAGGATCCTCGCATGATGTGTTTCCATCTATTATTCGGTCTTGGATGTCACCAAGAAATAATATCCATCTATTACCAACATCTATAATTCCCATGGCATTTCCTTCAGATGTACCACACAGTAGTTCTCAGGAACTATCATCGTTTTCCCAGTACCTACCAAGTCTTCGAAGTCTTTGGGTGCAGTTCAGCTCAGAACTTCAACTTTCTCATGAGGCAGCAATAATTTTGGATGCTTTGTATGCCACAAATTATAAGGAGTTGGAACTAACGGCAGTTACATCACAAATATCAAACCATTTCTTGAAGTCTCTTTTAATTCAAATTGGAATGAATTGCGAAGTCACTGATATTCTGAAAGAGATAATTTTACAGAAAATAGATGTTGGTGGTTGTTTCCTTCCCGGTGATAGTTATCCAGATTGGTTAACCTTTAATTCTGAAGGTTCTTCTGTAACTTTTGAAGTCCCTCAAGTGGAAGAGCGTCAATTGACGTCATTGATGTGCATTGTCTATACTTCAACCCCAGATAATGTAACATCTAGTGGCCTTAAAAATGTGTTGGTGAAAAATTACACAAAGGCTACCATTCAAATCTATAAGAGTGAGACATTAGTTTCCTTTGAAGATAAGGAGGGGCAGAGGTTAGTATCAAGTATAGAACCCGGAAACAAAGTGGAGATCGTTTTTGTTTTCGAGAATGATTTCACTGTGGAGAAGACAGTAGTATATCTGGTATATGATGCACAAGATTTTAACGTCATTGCTTGTAGAGGTGATGAAAATGAATGCTCTCTAAAGAACTTCTCTACTGAAGACGATCCCGCAGATGACTTCAATCAGAACAGAAAGAAGAAAAATCAAGTAGAATGA 3486 0.3764 MSKSSSSNVLSREPEIARIHDVFLSFRGKDTRASFTSHLYAALQKAGIKVFIDDNELQRGYHISSSLSRAIEQSQISIIVFSKNYADSRWCLNELVKIMNCRKNIGQVVVPVFYRVDPSEVRNPRGKFGIAFQRLLKKVPKKEKLVLSWKKALREAANIAGFPIVKSGNESEDVKGIVDNISHLLNKTDLFIANNPVGIESRVKDVIQQLHIQPKGVLLIGMWGMGGIGKTTIAKAIYNKTGRNFEGRSFLANIRENGKKNAGLMGLQEQLLFDICKERTIKIPNIELGKSMLKDKLSHTRVLVVLDDVNTLDQLNTFCASREWFGSGSIIIITTRDMHLLKGRVDKIFEMPIMNESESIELFSWNAFKRACPTKDFVRISKNVVEYSEGLPLALEVLGSYLFNKTESEWELVLETLKRIPYDQVQKKLRMSYDGLNHAEKEIFLHIACFFVGMDQNDVILLLNDCGLSAEIGISVLVARSLVTVDDKNMLGMHGQLRDMGRGIVCEESPRRPEKRSRLWDQEDVIDVLSRQTGKKGILGLALKLPTTNAKCFSTKAFEKMKRLRFLQLAEVKLDGDFEYVSRDLTWLSWNGLSDIPTNFFRENLVSIELENSNLEVLWKKSMRMEKLKILNLSHSHYLTQSPDFSNTPNLQKLVLKDCPLLSEVSPSIRHLNKILLINLEDCISLCSLPKSIYKLKSLKTLVLSGCLKIDKVEEDFEKMESLTTLLANNTSITTIPLSIRMENLKNLNLSHSHRLTNIPDFSCLPNLEKLVLKDCPMLSEVSPSIGHLNKILLINLEDCIGLGNLPRSIYKLKSLKTLILSGCLKIDKLEEDLEQMESLTTLLANNTSITTVPFSVVRSKSIGYISLCGFEGSSHDVFPSIIRSWMSPRNNIHLLPTSIIPMAFPSDVPHSSSQELSSFSQYLPSLRSLWVQFSSELQLSHEAAIILDALYATNYKELELTAVTSQISNHFLKSLLIQIGMNCEVTDILKEIILQKIDVGGCFLPGDSYPDWLTFNSEGSSVTFEVPQVEERQLTSLMCIVYTSTPDNVTSSGLKNVLVKNYTKATIQIYKSETLVSFEDKEGQRLVSSIEPGNKVEIVFVFENDFTVEKTVVYLVYDAQDFNVIACRGDENECSLKNFSTEDDPADDFNQNRKKKNQVE* 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0447 1161 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 749 1117 - -
Mtr6g0447 1161 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 27 741 - -
Mtr6g0447 1161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 447 IPR027417 -
Mtr6g0447 1161 Gene3D Ribonuclease Inhibitor 713 878 IPR032675 -
Mtr6g0447 1161 SMART till_3 19 159 IPR000157 GO:0007165
Mtr6g0447 1161 Pfam NB-ARC domain 200 435 IPR002182 GO:0043531
Mtr6g0447 1161 Pfam TIR domain 20 188 IPR000157 GO:0007165
Mtr6g0447 1161 Gene3D Ribonuclease Inhibitor 542 712 IPR032675 -
Mtr6g0447 1161 SMART AAA_5 216 355 IPR003593 -
Mtr6g0447 1161 SUPERFAMILY "Winged helix" DNA-binding domain 424 529 IPR036390 -
Mtr6g0447 1161 Gene3D - 17 188 IPR035897 -
Mtr6g0447 1161 SUPERFAMILY L domain-like 558 872 - -
Mtr6g0447 1161 PRINTS Disease resistance protein signature 219 234 - -
Mtr6g0447 1161 PRINTS Disease resistance protein signature 296 310 - -
Mtr6g0447 1161 PRINTS Disease resistance protein signature 388 402 - -
Mtr6g0447 1161 PRINTS Disease resistance protein signature 623 639 - -
Mtr6g0447 1161 Gene3D - 353 437 IPR042197 -
Mtr6g0447 1161 Coils Coil 827 847 - -
Mtr6g0447 1161 MobiDBLite consensus disorder prediction 1140 1161 - -
Mtr6g0447 1161 ProSiteProfiles TIR domain profile. 18 185 IPR000157 GO:0007165
Mtr6g0447 1161 Gene3D - 189 348 IPR027417 -
Mtr6g0447 1161 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 749 1117 IPR044974 GO:0006952
Mtr6g0447 1161 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 741 IPR044974 GO:0006952
Mtr6g0447 1161 ProSiteProfiles Leucine-rich repeat profile. 744 766 IPR001611 GO:0005515
Mtr6g0447 1161 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 162 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0447 Mtr-Chr6 5395380 5400778 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0447 17 857 WRKY Transcription Factor Family AT4G12020 30.405 1.00e-85 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0447 - - mtr:MTR_6g015775 2258.41