LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr6g0446	ATGTCTTCTGCAAGAACCGACACAAGGATCCATGACGTGTTCCTAAGTTTTAGAGGCGAAGATACTCGAGGATCGTTCACTTCACATCTCTATGCTTCTCTTCAAAATGCTGGAATTACTGTTTTTAGGGATGATGTTTCTCTTAAAGGAGGAGATCACATTTCAACAACATTATCACACGCAATTGAACAGTCTCGAATTTCTGTTATCATTTTTTCAACAAATTACGCGGAATCGCGATGGTGTCTTGAGGAGTTGGTGAAGATAATGGAGTGTCAGAGAACTATAGGTCAAATTGTTCTTCCATTGTTCTACGGTGTAGATCCATCTCAAGTACGACATCAAATCGGTGACTTTGGAAAAGCCTTTCAAAGTCTCTTGAATAAGATTTCAAAGGTGGAGAAGGACGAAGACGATTCATTGAAATGGAGAGACGCACTTCGTGAGGCAGCTGACCTTGCTGGATTTGTAGTTTTAAATTCCAGGAATGAAACTAAAGACATCAAGGATATTACTGAAAAAATTACTCATTTGCTTGACAAGAAAGACATGTTCATTGCTGATAAGCCAGTGGGAATTGATTCTCGAATGCAAGATGTTATTCAACGGCTAGACATCCAACAATCAAATGGTGTAATACTACTTGGGATGTGGGGTATGGGGGGAATCGGAAAAACAACTATTGCAAAAGCAATTTATAATGAAATCGGCCGCAAGTTTGAAGGGAGGAGTTTCCTTGCAAATGTTAGGGAAGTTTGGGAGCAACCTACCAAACAAGTAGATTTACAAGAACAACTTCTATCTGATATCTTCAGAGGAACGACGACCAAGATACAAAGTATTGATTCTGGGAAAATTATATTAAAGGACAGGCTTTGTCATAAAAGAATACTTATTGTACTTGACGATGTGAATGAGTTGGAACAGTTGGATGCTTTGTGTGGAAGTCGTAATTGGTTTGGTTTAGGGAGTAGAATAATTATCACAACCAGAAATATGCATATACTCAGAGGGGATAGAGTTGACGAAATATACTCAAATAAAAAAATGGATGACAGTGAATCACTTGAGCTTTTTATATGGCATGCATTCAAGCAAGTGAGTCCCAAAGCAGAATTTGTTGAAATTTCTAGAAATGCCGTTATGTATTCCGCGGGATTGCCGCTAGCTCTAGAAGTTCTTGGGCGATATTTGTATGAGAGGGATGTAACAGAATGGAAATGTGTACTGGAGAAACTCAAAACAATTCCCAATAATAAAGTACAAAATAAGTTAAAAATAAGCTATGATGGTTTAGACGATAAATCCCAGAAAGCAATATTCCTTGACATAGCTTGTTTCTTTATTGGTAAGGAGCGAAATGATGTTATACATATACTAAATGGCTGTCGATTGTTTGCTGAAGATGGAATAAGAGTCCTTGTTGAGCGTAGCTTAGTATATATTGATGATGATAACAAGCTTGGAATGCATGATTTGTTGCGGGATATGGGAAGAGAAATCATTTGTAATAATCCACCAAAGGATCCTGAGGAGCATAGCAGGTTGTGGCTTCCTGAGGATGTTGATGGTGTATTAGCAAGACAAACTGGAACAAAAGCTATTGAGGGATTGACTTTGAAGTTGCCAAGAGATAGTGCAAAATGTTATAGTACTGTTGCATTTAAGAAGATGAAGAAACTCAGATTGCTTGAACTTGCTGGTGTGCAGCTTGATGGGAATTTTGAACATCTTTCAAGAAATCTGAGATGGCTTTCTTGGAATGGATTTCCGTTATCATGCATACCTACAAACTTTTATCAAGCAAATTTAGTTTCCATCGAGTTAGAAAACAGTAATGTCAAAGATTTGTGGAAAGAGACCCAGAGAATGGAGAAGCTGAAAATTCTTAACCTTAGTCATTGTCATTATCTGACACAAACACCAGACTTTTCAAATTTGCCTAATCTTGAAAAGTTAGTACTCACAGATTGTCCAAGTCTTTCTGAGATTTCTCCTAGCATTGGCCATCTCAATGAAATTCTTCTGATAAATTTGGAAGATTGTATTGGCCTATGTAACCTCCCAAGAAGCATATATAAGTTGAAATCTTTGAAAACTCTCATCCTTACTGGCTGTTTAAAGATTGACAATTTGGAAGATGACTTGGAACATATGGAATCTTTAACCACTCTGCTTGCAAATAACACTGCAATAAAAAGAGTGCCTCTTTCAGTACTGAGATCAAAAAGCATTGGATATATCTCTTTGTGCGGTTATGAAGGATTCTCACACGATTTATTTCCATTTATCATTCAGTCTTGGATGTCACCAACAAATAATCTGATTTCCGCAGATCAAAGATCTTTTGATCCGATGCCATCTTTTGATTCGATGCCATCTTTTGATTGTTTATCTGAATCTTTTATGATTTCGGATGGACATGCGTTGTCATCTTATTTTTCTTTAGAAGAACCAAAGAGTTGTCCAGATGAACTGTCACCTCGTAATGAATATAGATCTTTTACACTTTTGGATAAACTTAGTTCAGATGAAGTTTGTAGTTCACATGAACTGTCTTATTTTTTAGAAGAACCAAAGAGTTGTCCAGATGAACTGTCACCTCGTAATGAATATAGATCTTTTACACTTTTGGATAAACTTAGTTCAGATGAAGTTTGTAGTTCACATGAACTGTCGTCTATTTCCAACCAGCTTTCAGGGCTTCAAAGTCTATGGATAGATTGTAGGTCGGAATTTCAACTTTCTGAAGATGCAAAGATAATTTTGGATGCCTTACATGCCACAAACTCTAAAGAATCCGTACCGACTACAACTACATCACAAGTATCAAATATGACTACTTCTACATTGGTTCAAAGCTGCAGTGAAGTGCACGTTTTAGGATCAAAACATTCCTTCAACTCTCTTTTAATTCAAATGAGAATGAATTGCAAACTCACCAACATTCTCGAAGAGATCATTTTACAGAATATGGATGTCAATGGGAGTGATGGTCGTTTTCTCCCCGGTGATAGTTATCCAAATTGGTTAACCTTTAATTCTGAAGGTTCTTCTGTAACTTTTCAAGTCCCTCAAGTGGAAGGGCGTAATTTGATGTCATTGATGTGCATTGTCTATTCTTCAACTCCGGATAACATAACATCAGATAGCCTTATAAATGTATTGGTGATAAATCACACAAAGGCCACCATTCAGCTCTATAGAAGAAATTGA	3216	0.3694	MSSARTDTRIHDVFLSFRGEDTRGSFTSHLYASLQNAGITVFRDDVSLKGGDHISTTLSHAIEQSRISVIIFSTNYAESRWCLEELVKIMECQRTIGQIVLPLFYGVDPSQVRHQIGDFGKAFQSLLNKISKVEKDEDDSLKWRDALREAADLAGFVVLNSRNETKDIKDITEKITHLLDKKDMFIADKPVGIDSRMQDVIQRLDIQQSNGVILLGMWGMGGIGKTTIAKAIYNEIGRKFEGRSFLANVREVWEQPTKQVDLQEQLLSDIFRGTTTKIQSIDSGKIILKDRLCHKRILIVLDDVNELEQLDALCGSRNWFGLGSRIIITTRNMHILRGDRVDEIYSNKKMDDSESLELFIWHAFKQVSPKAEFVEISRNAVMYSAGLPLALEVLGRYLYERDVTEWKCVLEKLKTIPNNKVQNKLKISYDGLDDKSQKAIFLDIACFFIGKERNDVIHILNGCRLFAEDGIRVLVERSLVYIDDDNKLGMHDLLRDMGREIICNNPPKDPEEHSRLWLPEDVDGVLARQTGTKAIEGLTLKLPRDSAKCYSTVAFKKMKKLRLLELAGVQLDGNFEHLSRNLRWLSWNGFPLSCIPTNFYQANLVSIELENSNVKDLWKETQRMEKLKILNLSHCHYLTQTPDFSNLPNLEKLVLTDCPSLSEISPSIGHLNEILLINLEDCIGLCNLPRSIYKLKSLKTLILTGCLKIDNLEDDLEHMESLTTLLANNTAIKRVPLSVLRSKSIGYISLCGYEGFSHDLFPFIIQSWMSPTNNLISADQRSFDPMPSFDSMPSFDCLSESFMISDGHALSSYFSLEEPKSCPDELSPRNEYRSFTLLDKLSSDEVCSSHELSYFLEEPKSCPDELSPRNEYRSFTLLDKLSSDEVCSSHELSSISNQLSGLQSLWIDCRSEFQLSEDAKIILDALHATNSKESVPTTTTSQVSNMTTSTLVQSCSEVHVLGSKHSFNSLLIQMRMNCKLTNILEEIILQNMDVNGSDGRFLPGDSYPNWLTFNSEGSSVTFQVPQVEGRNLMSLMCIVYSSTPDNITSDSLINVLVINHTKATIQLYRRN*	1072

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr6g0446	1071	SUPERFAMILY	L domain-like	490	765	-	-
	Mtr6g0446	1071	Coils	Coil	709	729	-	-
	Mtr6g0446	1071	PRINTS	Disease resistance protein signature	214	229	-	-
	Mtr6g0446	1071	PRINTS	Disease resistance protein signature	291	305	-	-
	Mtr6g0446	1071	PRINTS	Disease resistance protein signature	384	398	-	-
	Mtr6g0446	1071	PRINTS	Disease resistance protein signature	622	638	-	-
	Mtr6g0446	1071	Pfam	TIR domain	11	177	IPR000157	GO:0007165
	Mtr6g0446	1071	Gene3D	-	349	433	IPR042197	-
	Mtr6g0446	1071	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	184	444	IPR027417	-
	Mtr6g0446	1071	Gene3D	-	5	186	IPR035897	-
	Mtr6g0446	1071	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	21	1070	IPR044974	GO:0006952
	Mtr6g0446	1071	ProSiteProfiles	TIR domain profile.	9	179	IPR000157	GO:0007165
	Mtr6g0446	1071	Pfam	NB-ARC domain	195	425	IPR002182	GO:0043531
	Mtr6g0446	1071	PANTHER	RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED	21	1070	-	-
	Mtr6g0446	1071	SUPERFAMILY	Toll/Interleukin receptor TIR domain	2	156	IPR035897	-
	Mtr6g0446	1071	Gene3D	Ribonuclease Inhibitor	539	799	IPR032675	-
	Mtr6g0446	1071	CDD	AAA	191	342	-	-
	Mtr6g0446	1071	SMART	till_3	10	153	IPR000157	GO:0007165
	Mtr6g0446	1071	Gene3D	-	187	342	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr6g0446	Mtr-Chr6	5380723	5392164	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr6g0446	6	739	WRKY Transcription Factor Family	AT4G12020	31.167	3.50e-83	295

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr6g0446	-		-	mtr:MTR_6g015750	1864.74