Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0445 ATGTCTTCCTCCAGTAAAGCAATTTCTAAATGGAGAAAAGCAAGTATAGTAATAAGAGCAGTGTTTCGCTTCAAATCTCTTAATTTTGGCAAAAGTCGAAACGAAACAAGGATCCATGATGTGTTCTTAAGTTTTAGAGGAGAGGATACTCGTGCATCATTCACTTCACATCTCTATGCTTCTCTTCAAAATTACGGAATTAAAGTTTTCAGGGACGATGATTCGCTTCAAAGAGGAGATCACATTTCAACATCACTCCTACGAGCAATTGAACAGTCTCGAATGTCTATCATAGTTTTCTCAACAAATTACGCGGATTCACAATGGTGTCTTGATGAGTTGTTGAAAATAATGGAGTGTCACAGAACCATTGGACAAATTGTTCTGCCGGTGTTCTTCGACGTAGATCCATCCGAAGTACGTCGTCAAACCGGTGAATTTGGAAAAGCATTTCAAAATCTTTTGAATAAGATTGAGAAGGAAGAAAATGAGTCCCTAGAATTCAACTTGGGGTTTACTGAGTATCTGGACAGAAAGTGGAGAGCAGCGCTTCGTCAGGCAGCCGGCTTTGCTGGGTTCGTCGTTCTAAACTCAAGGAATGAAAGTGAGGCTATTAAGGATATTGTTGAAAATGTTACGCGTAAGCTTGACAAGACAGATTTGTTTATTGCTAATAATCCTGTGGGAGTTGAATCTCGAGTGCAAGATATGATTCAACTGCTGGACCAAGATATAAAACAATCAGATAATGTTCTTCTACTAGGGATGTGGGGTATGGGGGGAGTTGGTAAAACAACCATTGCCAAAGCTATTTACAATAAAATTGGTCGCAATTTTGAAGGTAGAAGCTTCCTTGCAAATATTAGGGAAGTTTGGGAGGAAAATGCTGGAAAAGTGAATTTACAAGAACAACTTCTCTTTGATATATGCAAAGATATGACAACCAAAATACAAAGCATTGAATTCGGAAAACTTGTATTGAAGGATAGACTCTGCCACAAAAGAGTACTAATTTTACTTGATGACGTTAATACATTGGACCAACTGAATGCTTTGTGTGGAAGTCATAAATGGTTTGGTTCGGGGAGTAGAATAATTATCACAACAAGAGATAGACATATACTTTGTGGGAATAGGGTTCATAAAGTATTCAAAATGAAACACATGGATGAAAGTGAATCAATTGAGCTATTAAGTTGGCATGCCTTCAAGCAAGCGAGTCCTACAAAAGATTTTGCTGAAATTTCTAGAAATGTAGTTGATTATTCTGGTGGATTGCCACTAGCTTTGGAAGTCCTTGGGTCATATTTGTTCGACAGAGGGATTACAGAATGGAAAAGTGCATTGGAAAAACTCAAAAGAATTCCTAATAATCAAGTACAGGAGAAGTTAAGAATAAGCTATGATGCTTTAAATGATGATACTGAGAAAGAAATATTCCTTGACATAGCTTGTTTCTTTATTGGAATGGACAGAAATGATGTTACACTTATATTAAATGGATGTGGACTTTTTGCTGAAATTGGAATAAGTATCCTTGTTGAGCGGAGTCTTGTCACTGTTGATGATAATAACAAACTTGGAATGCATGATTTGTTGCGAGATATGGGAAGAGAAATCATTCGTGGGAAATCACCAGAAGAGCTCGAGGAGCGTTGCAGGTTGTGGTTTCATGAGGATGTGCTTCATGTATTATCAGATCAAACTGGAACAAAAACGATTAAGGGGCTGGCTTTGAAGTTGCCAAGAGCTAATGAAAAATGTTTTAGTACTAAAGCATTCAAGAAGATGACGAGACTCAGATTGCTTCAACTTGCTGGGGTAAAACTTAATGGAGATTTTAAATATCTTTCGAGAAATCTGAGATGGCTGTCTTGGAATGGATGTTCTTTACCACATATACCTACAAACTTTTATAGAGAACATTTAGTTTCCATCGAGTTAGAGAATAGCCATGTCCAACTTTTGTGGAAAGACGGCCAGTGGATGGAAAAGCTGAAAATTCTAAATCTTAGTCATTCTCATTGTCTGACGCGCACCCCTGACTTTACATTCATGCCTAATCTTGAAAAGCTGGTGCTCAAAGATTGTCCAATGTTGTCTGAGATTTCTCCTAGCATTGGAAATCTCAGAGAAATTCTTCTAATAAATTTAGAAGATTGTGTTCGCCTTCAAAGCCTTCCAAGAAACATCTATAAGTTGAAATCTCTGAAAACTCTCATTCTTTCTGGGTGTGTAATGATTGACAAGTTGGAAGAGGACATAGAACAAATGGAATCTTTAACCACTCTGATTGCACATAAAACTGCAATAAAAAGAGTACCCTTTTCAGTGGTAATGTCACAAAGCATTGGATACATCTCTTTGTGCGGCTATGAAGGATTTTCACGTGATGTGTTTCCAGCGATCATTTGGTCTTGGATGTCACCAACAAATAATCTCCCATCCCCATTTCAAACATCTGATATCATGTCATCTCTTGTTCCTTTAGATGTACCACATAGTAATTCCCAGGAACTATCATCGATTTCCCAGTACCTTCCAAATCTTCAAAGGCTTTGGGTGGAGTGCAGCTCAGAACTTCAACTTTCTCATGATGCAGCAATAATTTTAGATGCCTTGTATGCCACAAGTTATAAGGAGTTGGAACCAACTACTGCTACATCCCAAGTATCAAAACATTCCTTAAAATCTCTTTTAATTCAAATTGGAATGAATTGCCAAGCCTCTGATATTCTGAAAGAGATAATTTTACAGAATATGGATCTCAATAGGAGTGGTAGTTTTTTGCTTCCTGGTGACAGTTATCCAAAGTGGTTAACCTATAGTTCTGAAGGTTCTTCTGTAACTTTTCAAGTTCCACAAGTGGAAGGGCGTAACCTGAAGACAATTATGTGCATAGTCTATACTTCAACCCCTGGTAATGTAATATCAAGTGGCCTTAAAATCATGTTATTGAAAAATTACACAAAGGCCATCATTCAGCTTTATAAGAGTGAGGTATTAGTGTCATTTGAAGATGAGGAGGGGGAAAGAGTAGTATCAAGTATAGAACCTGGTAACAAAATGGAGGTCGTTTTTGTTTTTGAGAACAGTTTCGTTGTGACGAAGACAGTAGTTTATCTCGTATATGATGAACCAATTGGCAAAAAAATGGAGTTATATCATGTACCAGATTTGAATGACATTACTTGTAGAGGAGCCTGCTGA 3210 0.3748 MSSSSKAISKWRKASIVIRAVFRFKSLNFGKSRNETRIHDVFLSFRGEDTRASFTSHLYASLQNYGIKVFRDDDSLQRGDHISTSLLRAIEQSRMSIIVFSTNYADSQWCLDELLKIMECHRTIGQIVLPVFFDVDPSEVRRQTGEFGKAFQNLLNKIEKEENESLEFNLGFTEYLDRKWRAALRQAAGFAGFVVLNSRNESEAIKDIVENVTRKLDKTDLFIANNPVGVESRVQDMIQLLDQDIKQSDNVLLLGMWGMGGVGKTTIAKAIYNKIGRNFEGRSFLANIREVWEENAGKVNLQEQLLFDICKDMTTKIQSIEFGKLVLKDRLCHKRVLILLDDVNTLDQLNALCGSHKWFGSGSRIIITTRDRHILCGNRVHKVFKMKHMDESESIELLSWHAFKQASPTKDFAEISRNVVDYSGGLPLALEVLGSYLFDRGITEWKSALEKLKRIPNNQVQEKLRISYDALNDDTEKEIFLDIACFFIGMDRNDVTLILNGCGLFAEIGISILVERSLVTVDDNNKLGMHDLLRDMGREIIRGKSPEELEERCRLWFHEDVLHVLSDQTGTKTIKGLALKLPRANEKCFSTKAFKKMTRLRLLQLAGVKLNGDFKYLSRNLRWLSWNGCSLPHIPTNFYREHLVSIELENSHVQLLWKDGQWMEKLKILNLSHSHCLTRTPDFTFMPNLEKLVLKDCPMLSEISPSIGNLREILLINLEDCVRLQSLPRNIYKLKSLKTLILSGCVMIDKLEEDIEQMESLTTLIAHKTAIKRVPFSVVMSQSIGYISLCGYEGFSRDVFPAIIWSWMSPTNNLPSPFQTSDIMSSLVPLDVPHSNSQELSSISQYLPNLQRLWVECSSELQLSHDAAIILDALYATSYKELEPTTATSQVSKHSLKSLLIQIGMNCQASDILKEIILQNMDLNRSGSFLLPGDSYPKWLTYSSEGSSVTFQVPQVEGRNLKTIMCIVYTSTPGNVISSGLKIMLLKNYTKAIIQLYKSEVLVSFEDEEGERVVSSIEPGNKMEVVFVFENSFVVTKTVVYLVYDEPIGKKMELYHVPDLNDITCRGAC* 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0445 1069 SMART till_3 38 190 IPR000157 GO:0007165
Mtr6g0445 1069 Pfam NB-ARC domain 234 467 IPR002182 GO:0043531
Mtr6g0445 1069 Pfam TIR domain 39 219 IPR000157 GO:0007165
Mtr6g0445 1069 PRINTS Disease resistance protein signature 253 268 - -
Mtr6g0445 1069 PRINTS Disease resistance protein signature 330 344 - -
Mtr6g0445 1069 PRINTS Disease resistance protein signature 423 437 - -
Mtr6g0445 1069 PRINTS Disease resistance protein signature 732 748 - -
Mtr6g0445 1069 SUPERFAMILY L domain-like 578 864 - -
Mtr6g0445 1069 SUPERFAMILY "Winged helix" DNA-binding domain 459 565 IPR036390 -
Mtr6g0445 1069 Gene3D - 36 213 IPR035897 -
Mtr6g0445 1069 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 217 483 IPR027417 -
Mtr6g0445 1069 ProSiteProfiles TIR domain profile. 37 216 IPR000157 GO:0007165
Mtr6g0445 1069 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 45 1043 - -
Mtr6g0445 1069 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 45 1043 IPR044974 GO:0006952
Mtr6g0445 1069 Gene3D - 388 472 IPR042197 -
Mtr6g0445 1069 Gene3D Ribonuclease Inhibitor 566 923 IPR032675 -
Mtr6g0445 1069 SUPERFAMILY Toll/Interleukin receptor TIR domain 32 192 IPR035897 -
Mtr6g0445 1069 Gene3D - 214 383 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0445 Mtr-Chr6 5373195 5379055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0445 36 778 WRKY Transcription Factor Family AT4G12020 30.223 8.23e-83 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0445 - - mtr:MTR_6g015695 1704.49