Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0444 ATGATCATTATATGTTTTGCTCTCACCATTTCATTCATTCTTTACTGCCATTTTCTCATCCAACAAATGGTGAAGGAAAACGACTCCAAAACCATTGGAGATAGTCTATCACCCAACAATCCTACCTCAGATCATTATTTTTCCTCCGTGTTTGAGCTGATTCCTGATCTGGAATTAGAATCAGAACCAAAACGGCTGTTCCTAAACTTCAGCGAGGAAGATGCTCTTTCTTCCTTCACTTCACATCTCCTTGCTGCTCTTCAAAAGTTTCGAATTACAGTTTTTACATACGATAATGTGCTTCAAAGAGGAGATCACATTTCAACATCATTATCAAGTGCAATCGGAGAGTCTAAAATTTTTATAATTGTTTTCTCAAAAAATTATGCCAATTCGAGACGGTGTTTGGATGAATTGGAAATAATAGTGAACTGTGGTAGAACCATAGGAGAAGTGGTTGTTCCGGTGTTCTACCATGTAGCCCCTACTGAAGTGCGTTATCAGAAAGGAGAGTTTGGAATATCTTTTCAAAGTTTTTTGAACAAAACTTCAAACAAGGTGGAATTAGAGCTAAGTTGGAGAGCAGCTCTTCGTCGGGCAGCTAGCATAGCAGGGTTTTTAATACTGAATTCCAGGAATGAAAGTGAGGATATCAAACGCATTGTTGACAGAGTTGTACACTTGTTTAGTTTGAAGCCTTCCTCGTCCACGCCTATGCCTTCCATTTCAACAGGAGAACAATCAATTGAACAAGAAGTCTTTTTTATTATAGCGTTTAGGCGGTCGAGGCATGGACGGAAACCGATTCTCAGATTGGATCCAACTTCGAATTCCGTGGTTTTGGACCCAAACCCTAATCCAGTTTCGAATCCAGAATCTGATCCAGTTTTAGATCCGGTGGTTTCAGACCCAAAATCAGACCCGGATCCAGAATCAAAACTAAAACCGGAACGAGTAAGGATTCACGACGTGTTCTTAAGTTTCAGAGGGGAGGACACTCGTTCTTCATTCACTTCACATCTCTATGCGGCTCTTAAAAATTTTGGAATTAAGGTTTTTAGAGATGATAATGAGCTTCAAAGAGGAGATTGCATTTCAACATCATTATCACACGCAATTGAACAGTCTCGAATTTCTATAATTGTTTTCTCAAAGAATTATGCTGATTCGCGATGGTGTCTGAATGAATTGGAAAAAATAATGAAGTGTCAAAGAACCATTGGGCAAGTGGTTGTTCCAGTGTTCTACCATGTAGATCCCTCTGAAGTGCGCAATCAGAAAGGTGAGTTTGGAAGGGCGTTTGAAAGTCTTTTGAACAGAATTTTAAACGAGGTGGAATTGGCGCTAAATTGGAAAGAGGCTCTTCGTGTGGCAGCAGGCCTTGCAGGATTTGTAGTTTTAAATTTCAGGAATGAAAGTGACGCAATCAATGACATTGTTGAAAATATTTCACGTTTGCTTGACAAAACAGACTTGTTTATTGCTAATTATCCAGTGGGCGTGGAATCTCGGGTACGAGATGTGATTCAGTTGCTAGACATACAGCGACCCAATGATGTTGTACTACTAGGGATATGGGGTATGGGAGGTATTGGTAAAACCACCTTAGCCAAAGCCATATACAACAGAATTGGTCGCAATTTTGAGGGTAGGAGCTTCCTTGCAAATATTAGGGAAGTGTGGGAGCAAAATGTTGGACCGGTTGACTTACAAAAACAACTTCTCTTTGATATTTGCAAAGAAACGAAGACTAAGATACAAAACATTGAGTCAGGGAAAAGTATACTAAAGGGTAGATTCTTCCATAAAAGAGTACTTCTAATACTTGATGATGTGAATACATTTGAACAACTAAATGCATTGTGTGGAAGTCGTAATTGGCTTGGTTCAGGGAGCAGAATAATCATCACAAGTAGAGATATGAACATACTTAGAGGTAATAGAGTTGACCAAATTTACAAAATGAAAGAAATGGACGGAAGCGAATCAATTGAGCTCTTTAGTTGGCATGCATTCAAGCAAGCGAGTCCAAGAGAAGATTTTGCAGAAATTTCAAGAAATGTAGTTGAGTATTCTGGGGGATTGCCACTAGCTCTGGAAGTCCTTGGATCACATTTGTTTGAATTGGGATTAGCAGAGTGGAAGTGTGTATTAGAAAAAATCAAAAGAATTCCTAATGATCAAGTTCAAAAGAAGTTAAAAATAAGCTATGATGCTTTAAATGATGACACTGAGAAAGAAATATTCCTTGACATAGCTTGTTTTTTTATTGGGATGGACAGGAATGATGTTATACATATATTAAATGGTAGCGAACTTTTTGCAGAAATTGGAGTAAGTGTCCTTGTTGAGCGAAGCCTTGTAACTGTTGATGATAGGAACAGACTTGCAATGCATGATTTGCTAAGAGATATGGGAAGAGAAATCGTTCGTGAGAAGTCACCAAAAGAGCCCGAGGAGCGTAGCAGGTTGTGGTTTAATAATGACGTGCTGGATGTATTATCAGAACAAACTGGAACAAAAGCTGTTGAGGGACTAGCTTTGAAATTGCCAACAACAGATGAAAAATGCTTTAGTACCAAAGCATTCAAGAAGATGAAAAAACTCAGACTGCTTCAACTTGCTGGTTTACAACTTGATGGTGATTTTGAATATCTTTCAAGAAATGTGAGATGGCTTTCTTGGAATGCATTTCCTTTAAAATGCATTCCTTCAAGCTTTTATCAGGGGAATTTAGTTTCCATTGAGTTAGTAAACAGCAATGTCAAACATGTGTGGGAAGATCCCCAGAGGCTGGAGAAGCTGAAAATTCTCAATCTTAGTCATTCTCATTATTTGACACAGACCCCAGACTTTTCAAACATGCCTAATCTTGAACAACTAGTAGTCACTGATTGTCCAAAGTTGTCAGAAGTTTCCCATAATATTGGAGATCTGAAAAAAATACTTCTAATAAATTTGGAGAATTGTATTAAGCTTCAAAGCCTTCCAAGAAGTATTTATAAGTTGAAATCACTACAAACTCTTCTTCTTTCTGGGTGTTTACTGATTGACAAATTGGAAGAAGATTTGGAACAGATGGAATCTTTAACCACCTTGGTTGCAAATAACACTGCAATAAAAAGAGTGCCGTTTTCAATTTTAAGGTTAAAAAGCATTGGATTTATCTCTTTGTGCGGATATGAAGGATTTTCATGTGAAGTGTTTCCAGCTATCATTTCGTCTTGGATGTCACCAACAATTAACCTCCCATTTCCATTTCAAACATCTGCTGCCATGTCATCTCTTATTTCTTTACACGTAACAAGTAGTAGTTCGCACGAACTATCATCTTTTTCGAAACAACTTCCAAGGCTTCGAAGTCTTTGCGTGGATTGCAATTCTGAAGATCAACTTTCTCTTGATGCAAAAATAATTTTGGATGCTCTATGTGCTACAAATTCTAAAGAATTGGAATCAACTAAAACTACATCACAAGAATCCAATATGACTACTTCTAAACTAATCCAATATGACAACCCAATGTCCGTTCCAGGATCAAAACATTCCCCGAAGTCTCTTTTAATTCAAATGGGAACGAATTGTCAAGTTGCCAATATTCTGAAAGAGATAATTTTACAGAATATCGATGGCAATGGGAATGGTGGTTGTTTCCTCCCCAGCGATAGTTATCCAAATTGGTTAACTTATAGTTCTGAGGGTTCTTCTTTAACTTTTGAAGTTCCTCATGTGGAAGGGCGTAACTTGAAGACAATGATGTGCATTGTGTATACTTCAACTCTGGATAATGTAACATCTAGTGGCCTTAAAAACATGTTAGTGATAAATTACACAAAGGCCACCATTCAGCTCTATAAGAGTGAGGCGTTATTCTCCTTTGAACATGAAGAGGGGCAAAGGGTAGTATCAAGTATAGAACCTGGTAACAAAGTTGAGGTTGTCTTTGTTTTCGAGAATGATTTCATTGTGAAGAAGACAACAGTTTATCTTGTATATGATTTGAATGCAATTGCTTGTAATGATGAAAATGAACGCCCTGTCAAGAGATTCTCTACTGAAGATGAGCCCACTGATGACTTCAATCAGAAAAGAAAGAAGAAAAGCCGAGTTGAATGA 4116 0.3783 MIIICFALTISFILYCHFLIQQMVKENDSKTIGDSLSPNNPTSDHYFSSVFELIPDLELESEPKRLFLNFSEEDALSSFTSHLLAALQKFRITVFTYDNVLQRGDHISTSLSSAIGESKIFIIVFSKNYANSRRCLDELEIIVNCGRTIGEVVVPVFYHVAPTEVRYQKGEFGISFQSFLNKTSNKVELELSWRAALRRAASIAGFLILNSRNESEDIKRIVDRVVHLFSLKPSSSTPMPSISTGEQSIEQEVFFIIAFRRSRHGRKPILRLDPTSNSVVLDPNPNPVSNPESDPVLDPVVSDPKSDPDPESKLKPERVRIHDVFLSFRGEDTRSSFTSHLYAALKNFGIKVFRDDNELQRGDCISTSLSHAIEQSRISIIVFSKNYADSRWCLNELEKIMKCQRTIGQVVVPVFYHVDPSEVRNQKGEFGRAFESLLNRILNEVELALNWKEALRVAAGLAGFVVLNFRNESDAINDIVENISRLLDKTDLFIANYPVGVESRVRDVIQLLDIQRPNDVVLLGIWGMGGIGKTTLAKAIYNRIGRNFEGRSFLANIREVWEQNVGPVDLQKQLLFDICKETKTKIQNIESGKSILKGRFFHKRVLLILDDVNTFEQLNALCGSRNWLGSGSRIIITSRDMNILRGNRVDQIYKMKEMDGSESIELFSWHAFKQASPREDFAEISRNVVEYSGGLPLALEVLGSHLFELGLAEWKCVLEKIKRIPNDQVQKKLKISYDALNDDTEKEIFLDIACFFIGMDRNDVIHILNGSELFAEIGVSVLVERSLVTVDDRNRLAMHDLLRDMGREIVREKSPKEPEERSRLWFNNDVLDVLSEQTGTKAVEGLALKLPTTDEKCFSTKAFKKMKKLRLLQLAGLQLDGDFEYLSRNVRWLSWNAFPLKCIPSSFYQGNLVSIELVNSNVKHVWEDPQRLEKLKILNLSHSHYLTQTPDFSNMPNLEQLVVTDCPKLSEVSHNIGDLKKILLINLENCIKLQSLPRSIYKLKSLQTLLLSGCLLIDKLEEDLEQMESLTTLVANNTAIKRVPFSILRLKSIGFISLCGYEGFSCEVFPAIISSWMSPTINLPFPFQTSAAMSSLISLHVTSSSSHELSSFSKQLPRLRSLCVDCNSEDQLSLDAKIILDALCATNSKELESTKTTSQESNMTTSKLIQYDNPMSVPGSKHSPKSLLIQMGTNCQVANILKEIILQNIDGNGNGGCFLPSDSYPNWLTYSSEGSSLTFEVPHVEGRNLKTMMCIVYTSTLDNVTSSGLKNMLVINYTKATIQLYKSEALFSFEHEEGQRVVSSIEPGNKVEVVFVFENDFIVKKTTVYLVYDLNAIACNDENERPVKRFSTEDEPTDDFNQKRKKKSRVE* 1372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0444 1371 Gene3D Ribonuclease Inhibitor 841 1173 IPR032675 -
Mtr6g0444 1371 Gene3D - 490 652 IPR027417 -
Mtr6g0444 1371 Gene3D - 61 233 IPR035897 -
Mtr6g0444 1371 ProSiteProfiles TIR domain profile. 62 229 IPR000157 GO:0007165
Mtr6g0444 1371 Pfam TIR domain 66 232 IPR000157 GO:0007165
Mtr6g0444 1371 Pfam TIR domain 322 488 IPR000157 GO:0007165
Mtr6g0444 1371 Gene3D - 319 489 IPR035897 -
Mtr6g0444 1371 ProSiteProfiles TIR domain profile. 320 487 IPR000157 GO:0007165
Mtr6g0444 1371 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 490 752 IPR027417 -
Mtr6g0444 1371 Pfam NB-ARC domain 502 739 IPR002182 GO:0043531
Mtr6g0444 1371 PRINTS Disease resistance protein signature 522 537 - -
Mtr6g0444 1371 PRINTS Disease resistance protein signature 599 613 - -
Mtr6g0444 1371 PRINTS Disease resistance protein signature 692 706 - -
Mtr6g0444 1371 PRINTS Disease resistance protein signature 930 946 - -
Mtr6g0444 1371 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 70 235 - -
Mtr6g0444 1371 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 328 1332 - -
Mtr6g0444 1371 SUPERFAMILY "Winged helix" DNA-binding domain 728 834 IPR036390 -
Mtr6g0444 1371 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 328 1332 IPR044974 GO:0006952
Mtr6g0444 1371 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 70 235 IPR044974 GO:0006952
Mtr6g0444 1371 SMART AAA_5 519 659 IPR003593 -
Mtr6g0444 1371 Coils Coil 1017 1037 - -
Mtr6g0444 1371 Gene3D - 658 741 IPR042197 -
Mtr6g0444 1371 SUPERFAMILY L domain-like 848 1138 - -
Mtr6g0444 1371 SUPERFAMILY Toll/Interleukin receptor TIR domain 321 463 IPR035897 -
Mtr6g0444 1371 MobiDBLite consensus disorder prediction 274 314 - -
Mtr6g0444 1371 MobiDBLite consensus disorder prediction 1347 1371 - -
Mtr6g0444 1371 SMART till_3 321 461 IPR000157 GO:0007165
Mtr6g0444 1371 SMART till_3 63 203 IPR000157 GO:0007165
Mtr6g0444 1371 SUPERFAMILY Toll/Interleukin receptor TIR domain 64 206 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0444 Mtr-Chr6 5348595 5355025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0444 322 1050 WRKY Transcription Factor Family AT4G12020 31.242 2.15e-85 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0444 - - cam:101494533 1429.85