Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0443 ATGTCTTCCACCAATAATTTTCGACAATCTGCGAAAGCAATTTCTAATTGGAGAAAAGTTAGAATAGTATTTAGTGCACTTGCTCGCTTCAAATACTATGCATCTCTTCGAAACGACACATGGATGCATGATGTGTTCCTAAGTTTTAGTGGAAAGGAGACGCGTGCATCTTTCACTTCGCATCTCTATGCTTCTCTTCAAAACGCCGGATTTCGTGTTTTCAGGGACGACGATTCGCTTCAAAGAGGAGATCACATTTCAACATCACTCTTGCGAGCAATTGAACAGACTCGAATTTCTATCATCGTTTTTTCAAAAAATTACGCCCAATCGCGATGGTGTCTTGATGAGTTGTTGAGGATAATGGAGTGTCAGAAAACCATTGGACAAATTGTTCTTCCAGTGTTCTTCAATGTAGATCCATCGGAAGTCCGTCATCAAACCGGTGAATTCGGAAAAGCATTTCAAATTCTTTTGAATAGGAGGATAGAGAAGGAAGAACCTGAGTTGATAGAATTCAACTTGGAGATGAAGTTGAGAACAGCGCTTCGTCAGGCAGCTGGCCTTGCTGGGTTCGTTGTCCCAAACTCCAGGAATGAAAGTAAGGCTATCCAGGATATTGTTGAAAATGTTACGCGTAAGCTTGACAAGACAGAATTGTTTATTGCTGATAATCCAGTGGGAGTTGAATCTCGAGTGCAAGGTATGATTCAACTAATGGAGCAAGATATCCAACAATCAAATGATGTTCTTCTACTGGGGATGTGGGGTATGGGGGGAGTTGGTAAAACAACCATTGCCAAAGCTATTTACAATAAAATTGGCCGCAATTTTGAAGGTAGAAGCTTCCTTGCAAATATTAGGGAAGTTTGGGAGGAAAATGCTGGAAAAGTGAATTTACAAGAACAACTTCTCTTTGATATCTGCAAAGATATGGCAACCAAAATTCAAAGCATTGAATGCGGAAAAATCATATTAAAGGATAGACTCTGCCATAAAAGAGTATTAATATTACTCGATGACGTTAATACATTGGACCAACTAAATGCTTTGTGTGGAAGTCGTAAGTGGTTTGGTTCGGGAAGCAGAATAATCATCACCACAAGAGACAGACATATACTTAGTGGGAATAGGGTTAATAAAGTATTCAAAATGAAACACATGGATGAAAGTGAATCAATTGAGCTATTCAGTTGGCATGCATTTAAGCAAGCGAGTCCTGCGAAAGATTTTGCTAAAATTTCTAGAAATGTAGTGGAGTATTCTGGGGGATTGCCACTAGCTTTGGAAGTTATTGGGTCATATTTGTTTGACAGAGGGATAACAGAATGGAAAAGTGCATTGGACAAACTCAAAAGAATTCCTAATAATCAAGTACAGAAGAAGTTAAGAATAAGCTATGATGCTTTAAATGATGATTATGAGAAAGAAATATTCCTTGATGTAGCTTGTTTCTTTATTGGGAAGGACCGAAATGATGTTACACTTATATTAGATGGATGTGGACTTTTTGCTGAAATTGGAATAAGTATCCTTGTTGAGCGAAGTCTTGTCACTGTTGATGATAAGAACAAACTTGGAATGCATGATTTGTTGCGAGATATGGGAAGAGAAATCATTCGTGGGAAATCACCAGAAGAGCTCGAGGAGCGTTGCAGGTTGTGGTTTCATGAGGATGTGCTTCATGTATTATCAGATCAAACTGGAACAAAAGCTATTAAGGGGCTGGCGTTGAAGTTGCCAAGAGCTAATGAAAAACGTTTTAGCACTAAAGCATTCAAGAAGATGAACAAACTCAGATTGCTCCAACTTGCTGGGGTAAAACTTGATGGAGATTTTGAATATCTTTCCAGAAATCTGAGATGGCTGTCTTGGAATGGATTTTGTTTAGCACATATACCAACAAATTTGTGTAGAGAAAATTTAGTTTCCATCGAGTTAGAGAATAGCCATGTCAAACTATTATGGAAAGAGGCCCAGATGATGGAAAAGCTAAAAATTCTAAATCTTAGTCATTCTCATTGTCTGACGCACACCCCAGACTTTTCATACTTGCCTAAGCTTGAAAAGTTAGTACTCAAAGATTGTTCAATGCTGTCTGAGGTTTCTCCTAGCATTGGGAATCTCGGCGAAATTCTTCTAATAGATTTTGAAGATTGTGTTAGCCTTCGTAACCTTCCAAGAAGCATTTATAAGTTGAAATCTCTAAAGACTCTTATTCTTTCAGGGTGTGTAATGATTGAGAAGTTGGAAGAGGATATAGAACAGATGGAATCATTAACCACTCTGCTTGCAAATAACACTGCAATAAAAAGGGTACCCTTTTCAGTAGTACGGTCAAAAAGCATTGGATACATTTCATTGTGTGGCCATGTAGGATTTTCACATGATGTTTTTCCATCTATCATTTGGTCTTGGATGTCACCAACAAATTATCTCCCACCCCTATTTCAAACATGTAATATGATGTCATCTCTTGTTCCTTTAGATGTACCACATAGTAGTTCCCATGAACTATCATCAATTTTCAAGTACCTTCCAATTCTTCGAAGTCTTTGGGTGGAATGTAGCTCGGAACTTCAACTTTCTCATGATGCAGCAACAATTTTGGATGTCTTATATGCGATAGATTATAAGGAGATGGAACCAACTGCAATTACATCACAAGTATCAAATAAGACTACTTCTACATCACAAGTATCAAAACATTCCTCAACGTCTCTTTTAATTCAAATTGGAATGAATTGCCGAATAACTAATATTCTGAAAGAGATAATTTTACAGCAGAATATGGATGGCAACGGGAGTGGTGGTTGTTTCCTCCCCAATGATAGTTATCCAAATTGGTTAACCTATAGTTCTGAAGGTTCTTCTGTGAAATTTGAAGTTCCTCAAGTGGAAGGGCGTAACTTGAAGACAATTATGTGCAATGTCTGTACTTCAACTCCGGATAATGTAACATCTAGTGGCCTTAAAAACATGTTATTGAAAAATTACACAAAGGCCACCATTCAGCTTTATAAGAGTGAAGCATTAGTCTCCTTTGAAGATGAAGAGGGGCAGAGGGTAGTATCAAGTCTAGAACCTGGTAACAAAGTGGAGATCCATTTTGTTCTCGAGAATGATTTCATTGTGAAGAAGACAACAATTTATCTCGTATACGATGAACCAGTTTCCAAAACAATGGAGTTGTATCATGTCAAGAGATTCTCTACTGATGAGGAGTGTTGA 3231 0.3788 MSSTNNFRQSAKAISNWRKVRIVFSALARFKYYASLRNDTWMHDVFLSFSGKETRASFTSHLYASLQNAGFRVFRDDDSLQRGDHISTSLLRAIEQTRISIIVFSKNYAQSRWCLDELLRIMECQKTIGQIVLPVFFNVDPSEVRHQTGEFGKAFQILLNRRIEKEEPELIEFNLEMKLRTALRQAAGLAGFVVPNSRNESKAIQDIVENVTRKLDKTELFIADNPVGVESRVQGMIQLMEQDIQQSNDVLLLGMWGMGGVGKTTIAKAIYNKIGRNFEGRSFLANIREVWEENAGKVNLQEQLLFDICKDMATKIQSIECGKIILKDRLCHKRVLILLDDVNTLDQLNALCGSRKWFGSGSRIIITTRDRHILSGNRVNKVFKMKHMDESESIELFSWHAFKQASPAKDFAKISRNVVEYSGGLPLALEVIGSYLFDRGITEWKSALDKLKRIPNNQVQKKLRISYDALNDDYEKEIFLDVACFFIGKDRNDVTLILDGCGLFAEIGISILVERSLVTVDDKNKLGMHDLLRDMGREIIRGKSPEELEERCRLWFHEDVLHVLSDQTGTKAIKGLALKLPRANEKRFSTKAFKKMNKLRLLQLAGVKLDGDFEYLSRNLRWLSWNGFCLAHIPTNLCRENLVSIELENSHVKLLWKEAQMMEKLKILNLSHSHCLTHTPDFSYLPKLEKLVLKDCSMLSEVSPSIGNLGEILLIDFEDCVSLRNLPRSIYKLKSLKTLILSGCVMIEKLEEDIEQMESLTTLLANNTAIKRVPFSVVRSKSIGYISLCGHVGFSHDVFPSIIWSWMSPTNYLPPLFQTCNMMSSLVPLDVPHSSSHELSSIFKYLPILRSLWVECSSELQLSHDAATILDVLYAIDYKEMEPTAITSQVSNKTTSTSQVSKHSSTSLLIQIGMNCRITNILKEIILQQNMDGNGSGGCFLPNDSYPNWLTYSSEGSSVKFEVPQVEGRNLKTIMCNVCTSTPDNVTSSGLKNMLLKNYTKATIQLYKSEALVSFEDEEGQRVVSSLEPGNKVEIHFVLENDFIVKKTTIYLVYDEPVSKTMELYHVKRFSTDEEC* 1077
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0443 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 481 IPR027417 -
Mtr6g0443 1076 SUPERFAMILY L domain-like 528 856 - -
Mtr6g0443 1076 SMART till_3 42 189 IPR000157 GO:0007165
Mtr6g0443 1076 Gene3D - 39 212 IPR035897 -
Mtr6g0443 1076 Pfam TIR domain 43 218 IPR000157 GO:0007165
Mtr6g0443 1076 Gene3D - 213 382 IPR027417 -
Mtr6g0443 1076 Gene3D - 387 471 IPR042197 -
Mtr6g0443 1076 PRINTS Disease resistance protein signature 252 267 - -
Mtr6g0443 1076 PRINTS Disease resistance protein signature 329 343 - -
Mtr6g0443 1076 PRINTS Disease resistance protein signature 422 436 - -
Mtr6g0443 1076 PRINTS Disease resistance protein signature 731 747 - -
Mtr6g0443 1076 Coils Coil 747 767 - -
Mtr6g0443 1076 Pfam NB-ARC domain 245 469 IPR002182 GO:0043531
Mtr6g0443 1076 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 49 1054 - -
Mtr6g0443 1076 Gene3D Ribonuclease Inhibitor 583 902 IPR032675 -
Mtr6g0443 1076 ProSiteProfiles TIR domain profile. 41 215 IPR000157 GO:0007165
Mtr6g0443 1076 SMART AAA_5 249 389 IPR003593 -
Mtr6g0443 1076 SUPERFAMILY Toll/Interleukin receptor TIR domain 34 191 IPR035897 -
Mtr6g0443 1076 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 49 1054 IPR044974 GO:0006952
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr6g0443 Mtr-Chr6 5322293 5328908 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0443 17 852 WRKY Transcription Factor Family AT4G12020 28.653 7.42e-81 288
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0443 - - mtr:MTR_6g015695 2125.13