Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0442 ATGGTTTCTTCCGGTGACTCCTCCCAACATGCCCAATTAATTTTGGGTGATGAAGATTCAAGAAAAACCGGCACAAGGATCCATGATGTGTTCTTGAGTTTCAGAGGAGAGGACACTCATGCTTGCTTCACTTCACATCTCTATGCTTCCCTTCAAAATCTCGGAATCAACGTTTTTAAGGATGATCATTCACTTCAAAGGGGAGATCACATTTCAAAATCACTAATGCAAGCAATTCAAGATTCTCAAATTTCTGTTATCGTTTTCTCAACAAATTATGCAGAATCGCAATGGTGTCTTGAAGAGTTGGTGGAGATAATGAAGTGTCGCAGAATTCAAGGCCAAGTTGTTTTGCCAGTGTTCTACGGTGTAGATCCATCTGAAGTACGTAATCAAACTGGTGAGTTCGGAAAAGCATTTCAAAGTCTATTGAAAAGGATTTCAAAAAAGGAGGAGGAAGATGATGAGTCCTTAGATTTGAAATTGGGGTTAGGTTCTGTAAACTCGCTTCGTGAATATCCAGAGCTTCGTGAGGCTGCTAACCTTGCTGGGGTTGTAGTCCTAAATGCCAGGAATGAAAGTGAAGCTATCAAGGATATTGTTAAAAATATTACACGTTTGCTTGACAAGACAGACTTATTTGTTGCTAATAATCCGGTGGGAGTTGAATCTCGTGTGCAAGATATGATTAAGCTGCTAGAACAAGATATCCAACAATCAAATGATGTTTTCCTTCTAGGGATGTGGGGTATGGGAGGAGTTGGCAAAACAACCATCGGAAAAGCTATTTACAATAAAATTGGCCGCGATTTTGATGGTAGAAGCTTCCTTGCAAATATTAGGGAAGTTTGGGAGGAAAAAGCTGGCCAAGTGAATTTACAAGAACAACTTCTCTCTGATATCTGCAAAGACACGACAACCAAAATACAAAGCATTGAAAATGGAAAAATCATATTAAAGGATAGACTTTGTCATAAAAGAGTACTAATTGTACTTGATGATGTTAATACTTTGGACCAACTGAATGTTTTGTGTGGCAGTCATCATTGGTTTGGTTTGGGGAGTAGAATAATTATCACAACAAGAGATAGATATATACTTCGTGGGAGTAGAGTTAACCTAATATATGAAATGAAGCATATGGATGACAGTGAATCAATTGAGCTATTTAGTTGGCATGCATTCAAGCAAGCAAGTCCTACAAAAGATTTAGCTGGAATTTCCAGAAATGTAGTTGAGTATTCTGGAGGATTACCGCTGGCTCTAGAAGTCCTTGGGTCGTATTTGTTCGACAGGGAGGTAGCGGAGTGGTACAGTGCCTTGGAGAAACTCAAAAGAATTCCTAACAACCAAGTACAAAAGAAACTAAAAATAAGCTATGATGGTTTAAATGATGATGCCGAGAAAGAAATATTTCTTGACATAGCTTGTTTCTTTATTGGGATCGACCGAAATGATGCTACACTAATATTAAATGGATGTGGACTTTATGCTGAAATTGGAATAAGTATTCTTGTTGAGCGAAGCCTTGTAACTGTTGATGATAAGAATAGGCTTAGAATGCATGATTTGCTACGAGATATGGGAAGAGAAGTCGTTCGTGAGAAATCACCGGAGGACCCTGAGGCACGTAGCAGATTGTGGCTTCATGATGATGTGCTTGATGTTTTATCAGATCAATCTGGAACTAAAGCTATAAAGGGATTGGCTTTGAAGTTGCCAAGAGTTGATGCAAAATGTTTTAGTACTAAAGCATTTAAGAAGATGAAGAGACTGAAATTGCTTCTACTTGCTGGAGTAAAACTTGATGGAAATTTTGAATGTCTTTCAAGAAATCTGAGGTGGCTGTCTTGGAATGAATTTCCTTTAACACATATACCAACAAACCTTTTTCTAGGAAATTTAGTTTCCATAGAGTTAGAGAATAGCAATGTCAAACTTATGTGGAAAGAGGCCCAGAGAATGGAGCATCTGAAAATTCTCAATCTTAGTCATTCACATTGTCTGACACATACCCCTGACTTTTCTTACATGCCTAATCTTGAAAAGCTTGTACTCAAAGATTGTCCAATGTTATCTGAAGTTTCTCCAAGCATTGGACATCTCAATAAAATTCTTCTGATAAATTTCAAAGACTGCATTAACCTTTCTAGCCTCCCAAGAAGCATCTACAAGTTGAAATCTTTGAAAACTCTCATTCTTTCTGGTTGTAAAAAGTTAGACAAGTTGGAAGAGGACTTGGAACAATTGGAATCTTTAACCACCCTGCTTGCAAATGACACTGCAATAACAAGAGTACCCTTCTCAATAGTTAGTTCCAAAAGCATTGGATATATTTCTTTATGTGGCTATGAAGGATTCTCACGTGATGTGTTTCCATCTATCATTTGGTCTTGGATGTCACCAACAAATAATCTCCGATCTCCATTTCAAACATCTGCTGCCATGTCATCTCTTGTTTCTTTTGATGTACCGAGCAGTAGTTTCAATGAGTTATCATCTTTTTCTGACCACCTTCCAAGACTTCGAAGTCTTCGGGTGGATTGCAATTCCGTAGATCAACTTTCTCTAGATGCAAAAACAATTTTGAATGCCCTATATGCCACTGTTTCTAAGGAATTTGAATCAACTGCAACTACATCACATGCACCTGATATGAAGACTTTTACATTAATTCAACGATGCAGTGAAGTGCATGTTTCAGGATCACAACATTCCTTCAAGTCTCTTTTAATTCAAATGGGAATGAATTGCCAAGTCACTAATATTCTGAAAGAGAAAATTTTGCAGAATATGGATGTTAATGGAAGTGGTGGTTGTTTCCTCCCTGGTGATAGTTATCCAAATTGGTTAACCTTCTACTCTGAAGGTTCTTCTGTAACTTTTCATGTCCCTCTGGTGGAAGGGCGTAACTTGAAGACAATGATGTGCATTATCTATACGTCAACCCAAAATAACATAACTTCATATGGCCTTAAAAATGTGTTGCTAAAAAATTACACAAAGGCTACCATTCAGCTTTATAAGAGAGAGGCATTAATTTCCTTTGAAGATGAGGAGGGGCAGAGAGTAGTATCAAGTATGGATCCTGGTGACAAAGTAGAGGTGGTTATTGTTTTCGAGAATTGTTTCATCGTGAAGAAGACAACAATTTATCTGGTATATGATAAACCAATTGGAAAGACTTTGGATTTATATCATTTACCAGATTTGAATGTCCTTGCTTCTAGTGATGATGAAAATGAGCACCCTGTCAAGAGATTCTCTATTGAAGAGGAGCACACTGAAGATGTCAATCAGAACAGAAAGAAGAAAAATCGAATGGAATGA 3330 0.3763 MVSSGDSSQHAQLILGDEDSRKTGTRIHDVFLSFRGEDTHACFTSHLYASLQNLGINVFKDDHSLQRGDHISKSLMQAIQDSQISVIVFSTNYAESQWCLEELVEIMKCRRIQGQVVLPVFYGVDPSEVRNQTGEFGKAFQSLLKRISKKEEEDDESLDLKLGLGSVNSLREYPELREAANLAGVVVLNARNESEAIKDIVKNITRLLDKTDLFVANNPVGVESRVQDMIKLLEQDIQQSNDVFLLGMWGMGGVGKTTIGKAIYNKIGRDFDGRSFLANIREVWEEKAGQVNLQEQLLSDICKDTTTKIQSIENGKIILKDRLCHKRVLIVLDDVNTLDQLNVLCGSHHWFGLGSRIIITTRDRYILRGSRVNLIYEMKHMDDSESIELFSWHAFKQASPTKDLAGISRNVVEYSGGLPLALEVLGSYLFDREVAEWYSALEKLKRIPNNQVQKKLKISYDGLNDDAEKEIFLDIACFFIGIDRNDATLILNGCGLYAEIGISILVERSLVTVDDKNRLRMHDLLRDMGREVVREKSPEDPEARSRLWLHDDVLDVLSDQSGTKAIKGLALKLPRVDAKCFSTKAFKKMKRLKLLLLAGVKLDGNFECLSRNLRWLSWNEFPLTHIPTNLFLGNLVSIELENSNVKLMWKEAQRMEHLKILNLSHSHCLTHTPDFSYMPNLEKLVLKDCPMLSEVSPSIGHLNKILLINFKDCINLSSLPRSIYKLKSLKTLILSGCKKLDKLEEDLEQLESLTTLLANDTAITRVPFSIVSSKSIGYISLCGYEGFSRDVFPSIIWSWMSPTNNLRSPFQTSAAMSSLVSFDVPSSSFNELSSFSDHLPRLRSLRVDCNSVDQLSLDAKTILNALYATVSKEFESTATTSHAPDMKTFTLIQRCSEVHVSGSQHSFKSLLIQMGMNCQVTNILKEKILQNMDVNGSGGCFLPGDSYPNWLTFYSEGSSVTFHVPLVEGRNLKTMMCIIYTSTQNNITSYGLKNVLLKNYTKATIQLYKREALISFEDEEGQRVVSSMDPGDKVEVVIVFENCFIVKKTTIYLVYDKPIGKTLDLYHLPDLNVLASSDDENEHPVKRFSIEEEHTEDVNQNRKKKNRME* 1110
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0442 1109 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 143 IPR035897 -
Mtr6g0442 1109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 475 IPR027417 -
Mtr6g0442 1109 Pfam NB-ARC domain 228 460 IPR002182 GO:0043531
Mtr6g0442 1109 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 35 1055 - -
Mtr6g0442 1109 ProSiteProfiles TIR domain profile. 26 208 IPR000157 GO:0007165
Mtr6g0442 1109 SMART till_3 27 170 IPR000157 GO:0007165
Mtr6g0442 1109 Pfam TIR domain 28 204 IPR000157 GO:0007165
Mtr6g0442 1109 MobiDBLite consensus disorder prediction 1080 1109 - -
Mtr6g0442 1109 Gene3D - 23 214 IPR035897 -
Mtr6g0442 1109 Coils Coil 733 760 - -
Mtr6g0442 1109 Gene3D Ribonuclease Inhibitor 563 891 IPR032675 -
Mtr6g0442 1109 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 35 1055 IPR044974 GO:0006952
Mtr6g0442 1109 Gene3D - 380 464 IPR042197 -
Mtr6g0442 1109 Gene3D - 215 373 IPR027417 -
Mtr6g0442 1109 SUPERFAMILY L domain-like 520 856 - -
Mtr6g0442 1109 PRINTS Disease resistance protein signature 245 260 - -
Mtr6g0442 1109 PRINTS Disease resistance protein signature 322 336 - -
Mtr6g0442 1109 PRINTS Disease resistance protein signature 415 429 - -
Mtr6g0442 1109 PRINTS Disease resistance protein signature 724 740 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr6g0442 Mtr-Chr6 5308782 5314876 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0442 12 770 WRKY Transcription Factor Family AT4G12020 29.820 9.62e-83 295
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0442 - - mtr:MTR_6g015695 1479.54