Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0440 ATGGGAAGAGAAATCATTCGTGGGAAATCACCAGAAGAGCTCGAGGAGCGTTGCAGGTTCTGGTTTCAGGAGGATGTGCTTCATGTTTTATCAGATCAAACTGGAACAACAACTATTAAGGGGCTGGCTTTGAAGTTGCCAAGAGCTAATGAAAAATGTTTTAGTACTAAAGCATTCAAGAAGATGAAGAGACTCAGATTGCTTCAACTTGCTGGGGTAAAACTTGATGGAGATTTTGAATATCTTTCAAAAAATCTGAGATGGCTTTCTTGGAACGGATGTTGTTTACCACATATACCTGCAAACTTTTATAGAGAAAATTTAGTTTCCATCGAGTTAGAGAATAGCCGTGTCAAACTTTTATGGAAAGAGGCCCAGGTATAA 384 0.388 MGREIIRGKSPEELEERCRFWFQEDVLHVLSDQTGTTTIKGLALKLPRANEKCFSTKAFKKMKRLRLLQLAGVKLDGDFEYLSKNLRWLSWNGCCLPHIPANFYRENLVSIELENSRVKLLWKEAQV* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0440 127 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 117 IPR044974 GO:0006952
Mtr6g0440 127 SUPERFAMILY L domain-like 43 122 - -
Mtr6g0440 127 Gene3D Ribonuclease Inhibitor 25 125 IPR032675 -
Mtr6g0440 127 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0440 Mtr-Chr6 5304956 5305929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0440 2 123 WRKY Transcription Factor Family AT4G12020 36.154 2.80e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0440 - - mtr:MTR_6g015675 263.848