Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0439 ATGGGAAAGAAAAACGACGAACCTGCTGCTTCTTCTTCATCATCTTCTGCTTCTGTGGTTTTGCAACTGGACATGCACTGTCATGGATGCACCAAGAAGATCCTAAGAACTGTTCACCGTTTCGATGGTGTGCAGGAAGTTACACATATATCCTATAACAAACTAAAAATTGTTGGAAACGTGGACCCTGAAATAGTGCGAGATAAATTGCAGCGTAAAATTAACAAGGTGGTTTACCTCGTGAAGGAAAATAAACTTCATGAAGTGTTTTTGAGTTTTAGAGGGAAGGACACTCGTGTATCCTTCACTTCACATCTCTATGCTGCACTTCAAAATGCTGGAATTACTGTTTTTAGAGACGATGATTCGCTTCAAAGAGGTGATCAAATTTCAACATCACTACTACGAACAATTGAACTAACTCAAATTTCTGTGATTGTTTTCTCGAGCAATTATTCCGATTCAAAATGGTGTCTGGATGAATTGGTGAGAATAATGAAATGTCGCAGAACTACAGGACAAGTTGTTCTACCGATATTCTACGATGTTGATCCCTCAGAAATACGTCATCAAACAGGAGAGTTTGGAAAAGCATTTCAAAATCTTTTGAACAGAATCAGAATTTCAAATGAGATAGACGATTCGATGAATTTAGTGCCTCTTTGGATAGAGGCGCTTCGTGAAGTGGCTGGTCTTGCAGGGTTTGTAGTCCTAAATTCCAGGAATGAAAGCGAGGCTATCAAGGATATCGTCGAAAAAGTTACGCGCTTGCTTAACAAGACAGACTTGTTTGTTGTTGATAATCCAGCGGGGGTTGAATCCCGATTGCAAGATATGATTCAACTGCTTGATATCCAACAATCAAATGATATTCTACTATTAGGGATGTGGGGTATGGGAGGAATTGGTAAGACTACCATTGTGAAAGCCATTTATAATAAACTTGGCCACAACTTTGAAGGTAGGAGTTTCCTTGCAAATATTAGGGAAGTTTGGGAGCAACCGGATGGACAGTTGCATTTACAAGAACGACTTCTTTTCGATATCTGCAAAGAAACAACAACAAAGATACAAAACATTGAGTCGGGAAAAGTTATATTAAAGGATAGACTCTGTCATAAGAAAATACTTCTTGTACTAGATGATGTGAATTCATTGGACCAACTGAAAGCTTTATGTGGTGAGCGTAATTGGTTTGGTTCAGGGAGTAAAATAGTCATCACAACTAGAGATATGAATATACTTAGAGGGAATAGAGTTGACCAGGTATATGTGATGAAAGAAATGGATGCAAATGAATCACTTGAGCTATTTAGTTGGCATGCGTTCAAGCAAGCAAGTCCAAGAGATGGTTTTGTTGGAATTTCTGAAAATGTAGTCGAGTATTGTGGTGGATTGCCGCTAGCTTTGGAAGTTCTAGGCTCATATTTGTTTGATAGAGGGGCAGTAGAATGGAACTGTGCATTAGAAAAACTTAAAAGAATTCCTAACAATCAAGTACAAAAGAAGTTAAAAATAAGCTATGATGGTTTAAATGACGAGACTGAGAAAGAAATATTTCTTGACATAGCTTGTTTCTTTATTGGGATGGACCGAAATGATGTCATACAAATATTAAATGGCTGTGGACTTTTTGCAGAAATTGGAATAAGTGTTCTTGTTGAGCGAAGCCTTGTAATTGTTGACAGCAAGAACAAACTTGGAATGCACGATTTGCTGCGAGATATGGGAAGAGAAATCGTTCGTGAGAAATCACCAAAGGAGCTTGGGGAGCGTAGCAGGTTGTGCTTTAAGGAGGATGTGCTTGATGTATTATCAGAACAAACCGGAACACAAGCTGTTGAGGGACTGGCTTTGAAGTTGCTAAAAGGTGATGCAAATCGTTTTAGAACTAAAGCATTTGAAAAGATGAATAAACTAAGATTGCTTCAACTTTCTGGCGTACAACTTGATGGAGATTTTGACTATCTTTCTAGAAAACTAAGATGGCTATGTTGGAATGGATTTCCTTTAAGATGCATACCTAAAAACTTTGATCAAGGAAATTTAGTTTCCATGGAGTTTGAAAACAGCAGTGTCAAACTTCTGTGGAAAGAGAACAAGATGATGGAGAAGCTGAAAATTCTCAATCTTAGTCATTCTCATTACCTGATACAAACCCCGGACTTTTCTTACTTACCTAATCTTGAAAAGTTAGTACTCGTGGATTGTCCAAGTTTGTGTGAGATTTCTCATAGCATTGGAGATCTCAAGAAAATTCTTCTCATTAATTTGGAAGACTGTATTAGCCTATGTAGCCTGCCAAGAAGCATCTATAAGTTGAATTCTCTAAAAACTCTCATTCTTTCGGGTTGTTTAAAGATTGACAAGTTGGAAGAGGACTTAGAACAAATGAAATCTTTAACCATTCTGATCGCAAATAACACTGCAATAACAAAAGTTCCCTTTTTAGTAGTAAGGTCAAAAAGCATTGGATATATTTCTCTGTGTGGCTATGAAGGATTCTCACGCGATGTATTTCCATCTATCATCTGGTCTTGGATGTCACCAACAAGTTCTCTTTCATTCGAAGTTCAAATATCTCCTGCGATGTCATCTCTGGTTTCTTTAGATATACCACATAGTAGCTCCCAAGATCTGTCAACTATTTCCAACCACCTTTCAAGGCTTCGAAGTCTATGGGTAGAGTGTGGCTCAGAACTACAACTTTCTGAAGATGCACAAATCATTTTGGATGCTTTATACGCCACATTTTCTAAGGAAATGGAATCGATTTCAGCTACTTCACAAGCATCAGATATGAAAACTTCTGCATTAATTCAACGCTGCATTCAATTGCACGGTTCCAGATCAGAAGATTACTTAAAGTCTGTTCTAATACAAATGGGAATGAATTTCCAAGTAACCAATAATCTAAAAGAAAACATTTTACAGAATATGGATGAGAATGGGAGTGGTGGTTGTTTGCTTCCTGGTGACAGTTATCCAGATTGGTTAACTTTCAATTCTGAAGGTTCTTCTGTTACTTTTGAAGTTCCTCAAGTGGAAGGGCGAATGTTGAAGACAATAACGATATGTGTTGTCTATTCTTCAACTTCGGATAATATAACATCTGATGGCCTGAGAAACTTGTTGGTGAAAAATTACACAAAGGCTACCATTCAGCTATACAAGAGAGAGGCAGTAGCCGCCTTTGAAGATGAGGAGGGCCAGAGAGTTGTATCAAGTATAGAACCTGGTAACAAAGTGGAGGTTGTCGTTGTTATTGAGAATGGTTTCATTGTGAAGAAGACAGCAATTTATCTCATATATGATGAAAAAGAATGCTTGGTCAGAAAGGACTCTCTTAAAGCAACTCCCATGGATGACTTACAACATAACAGAAGGGAGAAATTTTTCAAGTGGAGATGGAAGACGGTTAAAGAATGGTGTGGTAAAAATAAATCCTTATGTTGGCTGGAATCCTCGGTTAAAGACGGTTAA 3483 0.3784 MGKKNDEPAASSSSSSASVVLQLDMHCHGCTKKILRTVHRFDGVQEVTHISYNKLKIVGNVDPEIVRDKLQRKINKVVYLVKENKLHEVFLSFRGKDTRVSFTSHLYAALQNAGITVFRDDDSLQRGDQISTSLLRTIELTQISVIVFSSNYSDSKWCLDELVRIMKCRRTTGQVVLPIFYDVDPSEIRHQTGEFGKAFQNLLNRIRISNEIDDSMNLVPLWIEALREVAGLAGFVVLNSRNESEAIKDIVEKVTRLLNKTDLFVVDNPAGVESRLQDMIQLLDIQQSNDILLLGMWGMGGIGKTTIVKAIYNKLGHNFEGRSFLANIREVWEQPDGQLHLQERLLFDICKETTTKIQNIESGKVILKDRLCHKKILLVLDDVNSLDQLKALCGERNWFGSGSKIVITTRDMNILRGNRVDQVYVMKEMDANESLELFSWHAFKQASPRDGFVGISENVVEYCGGLPLALEVLGSYLFDRGAVEWNCALEKLKRIPNNQVQKKLKISYDGLNDETEKEIFLDIACFFIGMDRNDVIQILNGCGLFAEIGISVLVERSLVIVDSKNKLGMHDLLRDMGREIVREKSPKELGERSRLCFKEDVLDVLSEQTGTQAVEGLALKLLKGDANRFRTKAFEKMNKLRLLQLSGVQLDGDFDYLSRKLRWLCWNGFPLRCIPKNFDQGNLVSMEFENSSVKLLWKENKMMEKLKILNLSHSHYLIQTPDFSYLPNLEKLVLVDCPSLCEISHSIGDLKKILLINLEDCISLCSLPRSIYKLNSLKTLILSGCLKIDKLEEDLEQMKSLTILIANNTAITKVPFLVVRSKSIGYISLCGYEGFSRDVFPSIIWSWMSPTSSLSFEVQISPAMSSLVSLDIPHSSSQDLSTISNHLSRLRSLWVECGSELQLSEDAQIILDALYATFSKEMESISATSQASDMKTSALIQRCIQLHGSRSEDYLKSVLIQMGMNFQVTNNLKENILQNMDENGSGGCLLPGDSYPDWLTFNSEGSSVTFEVPQVEGRMLKTITICVVYSSTSDNITSDGLRNLLVKNYTKATIQLYKREAVAAFEDEEGQRVVSSIEPGNKVEVVVVIENGFIVKKTAIYLIYDEKECLVRKDSLKATPMDDLQHNRREKFFKWRWKTVKEWCGKNKSLCWLESSVKDG* 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0439 1160 ProSiteProfiles TIR domain profile. 85 258 IPR000157 GO:0007165
Mtr6g0439 1160 SUPERFAMILY "Winged helix" DNA-binding domain 499 605 IPR036390 -
Mtr6g0439 1160 Gene3D - 429 512 IPR042197 -
Mtr6g0439 1160 Gene3D Ribonuclease Inhibitor 617 947 IPR032675 -
Mtr6g0439 1160 SUPERFAMILY L domain-like 623 895 - -
Mtr6g0439 1160 Pfam NB-ARC domain 274 508 IPR002182 GO:0043531
Mtr6g0439 1160 SUPERFAMILY Toll/Interleukin receptor TIR domain 83 235 IPR035897 -
Mtr6g0439 1160 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 257 523 IPR027417 -
Mtr6g0439 1160 SMART till_3 86 232 IPR000157 GO:0007165
Mtr6g0439 1160 Gene3D - 87 255 IPR035897 -
Mtr6g0439 1160 Gene3D - 12 86 - -
Mtr6g0439 1160 Gene3D - 256 424 IPR027417 -
Mtr6g0439 1160 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 93 1104 IPR044974 GO:0006952
Mtr6g0439 1160 Pfam Heavy-metal-associated domain 22 77 IPR006121 GO:0046872
Mtr6g0439 1160 CDD HMA 25 76 IPR006121 GO:0046872
Mtr6g0439 1160 PRINTS Disease resistance protein signature 293 308 - -
Mtr6g0439 1160 PRINTS Disease resistance protein signature 370 384 - -
Mtr6g0439 1160 PRINTS Disease resistance protein signature 463 477 - -
Mtr6g0439 1160 PRINTS Disease resistance protein signature 701 717 - -
Mtr6g0439 1160 SUPERFAMILY HMA, heavy metal-associated domain 21 72 IPR036163 GO:0046872
Mtr6g0439 1160 Pfam TIR domain 87 260 IPR000157 GO:0007165
Mtr6g0439 1160 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 93 1104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0439 Mtr-Chr6 5288695 5303110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0439 703 828 WRKY Transcription Factor Family AT4G12020 34.921 2.40e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0439 - - cam:101512894 1481.85