Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0435 ATGTGTATATATACGTATACATTCTATTTTTGTAGGAATGAAAGTGAGGATATCAAAGGTATTGTTAACAGCATTTCACAGTTGTTGAATAAGACAGACTTATTTATTTCAAATAACCCTGTGGGAATTGAATCTCGGGTGCAAGATGTGATTAACCGTCTAGATTTCCAATCAAAGGGTGTTCAACTACTAGGGATGTGGGGTATGGGGGGAATTGGAAAAACAACCATTACAAAAGCCATTTACAATAAGATTGGCCGCAATTTTGATGGTAGGAGCTTCCTTGCAAATATAAGGGAAGATGGGGCAAAAATTGCTGGACAGGTGGGTCTACAAGAACAACTTTTATTTGATATCTGTAAAGAAAGAACAATCAAAATACCAAACACTGAGTTAGGAAAAAACACATTAAAGGACAAACTTTGCCATAAAAGAGTACTTATTGTACTTGATGATGTGAATACACTAGACCAACTGAATACTTTCTGTGGAAGTCGTGAATGGTTTGGCTCAGGGAGCGTAATAATCATCACAACTAGAGATTTGGATTTACTTTCAGGGAGAGTTGACAAAATATACAATATGACAACGATGAATGAAAGTGAATCAATTGAGCTTTTTAGAAGTGAGTCCTACAAGAGATTTTATTAG 651 0.3548 MCIYTYTFYFCRNESEDIKGIVNSISQLLNKTDLFISNNPVGIESRVQDVINRLDFQSKGVQLLGMWGMGGIGKTTITKAIYNKIGRNFDGRSFLANIREDGAKIAGQVGLQEQLLFDICKERTIKIPNTELGKNTLKDKLCHKRVLIVLDDVNTLDQLNTFCGSREWFGSGSVIIITTRDLDLLSGRVDKIYNMTTMNESESIELFRSESYKRFY* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0435 216 Gene3D - 21 192 IPR027417 -
Mtr6g0435 216 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 9 213 - -
Mtr6g0435 216 Pfam NB-ARC domain 44 211 IPR002182 GO:0043531
Mtr6g0435 216 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 213 IPR044974 GO:0006952
Mtr6g0435 216 PRINTS Disease resistance protein signature 63 78 - -
Mtr6g0435 216 PRINTS Disease resistance protein signature 140 154 - -
Mtr6g0435 216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 209 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0435 Mtr-Chr6 5237477 5238662 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0435 41 207 WRKY Transcription Factor Family AT5G45050 34.884 5.68e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0435 - - mtr:MTR_6g015600 365.54