Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0430 ATGGAGAACAAATTTCCTCCCGAATCATTTTATCATTATTCTTCAATCGAACGTAAGCCGATTCCCAGAATGAAAAATAACTTGCCACGGACACGCCAGAGAAAAGCGTCTCCGCCACGTAGTAGACCGGAACTAGTAAGGATCCATGATGTGTTCTTAAGTTTTAGAGGGGAAGATACTCGTTCTTCCTTTACTTCACATCTCTATTCCGCTCTTCAAAAGGACGGAATTAAGATTTTTTTAGATGATAATGAGCTTCAAAGAGGAGATTATATATCAACATCATTATCACGCTCAATTGAACAGTCTCAAGTTTCTATAATTGTTTTTTCCAAAAATTATGCCAATTCGAGATGGTGTTTGGATGAATTGGAAAAGATAATGAAGTGTCGCAGAACCATAGGACAAGTTGTTGTTCCAGTGTTCTACCATGTAGACCCCTCTGAAGTACGTCATCAGACAGGCGAGTTTGGAATAGCTTTTCAAAGTCTTTTGAACAAAATTTTAAACGAGGAGGAATTGGTGCTACGTTGGAGAGAGGCTCTTCGTGAGGCCGCTGGCCTTGCAGGATTTACAGTTCTAAATTCCAGGAATGAAAGTGAGGCAATCAAAGACATTGTTGAAAATGTTACACATTTGCTAGGCAAGACAGATTTGTTCATTGCGGATAATCCGGTGGGAGTCGAATCTCGAGTACGAGATGTGATTCAATTGCTAGACATCCAACGATCAAATGGTGTTATACTACTAGGGATCTGGGGTATGGGAGGTATTGGTAAAACAACGTTAGCCAAATCCATTTACAATGAAATTGGTCGCAATTTTGAGGGTAGGAGCTTCCTTGCAAATATTAGGGAAGTTTGGGAGCAAAATGTTGGACCAATATATTTACAAAAACAAATTCTCTTTGATATATGCAATGAAACGAAAACTAGGATACAAAACGTTGAGTCAGGGAAAAGTATACTAAAGGATAGACTCTTCCATAAAAGAGTACTTCTGGTACTTGATGATGTGAATACATTTGACCAACTGAATGCTTTGTGTGGAAGGAGTATTTGGCTTGGTCCAGGGAGCAGAATAATCATCACAACTAGAAATATGAAAATACTTAGAGGTAATAGAGTTGACCAAGTTTACAAAATGAAAATAATGGATGAAAGCGAATCAATTGAGCTATTTAGTTGGCATGCATTCAAGCAAGCAGGTCCTAGAGAAGGTTTTGCTGGAATTTCAAGAAATGTAGTTGAGTATTCTGGGGGATTGCCACTAGCTCTGGAAGTCCTTGGATCATATTTGTTTGATATGGGGATAGAAGAATGGAAGTGTGCATTAGAAAAACTCAAAAGAATTCCTAATGATCAAGTACAAAAGAAGTTAAAAATAAGCTACGATGCTCTAAGTGATGACACCGAGAAAGAAATATTCCTTGACATAGCTTGTTTCTTTATTGGGATGGACAGGAATGATGTTATACATATATTAAATGGTAGCGAATTTTTTGCAGAAATTGGAGTAAGTGTCCTTGTTGAGAGAAGCCTTGTAACTGTTGATGATAGGAACAAACTGCAAATGCATGATTTGCTAAGAGATATGGGAAGAGAAATCGTTCGTGAGAAGTCACCAAAAGAGCCTGAGGAGCGTAGCAGGTTGTGGTTTAACAAGGATGTGATTGACGTATTATCAGAGAAAACCGGAACAAAAGCTGTTGAGGGATTAGCTTTGAAATTGCCAACAGCAAATGGAAAATGCTTTAGTACCAAAGCATTCAAGGAGATGAAAAAACTTAGACTGCTTCAACTTGCTAGTGTACAACTTGAGGGGGACTTTGAATATCTTTCAAGAAATCTGATATGGCTTTCTTGGAATGGATTTCCTTTGAAATGCATTCCTTCGAGTTTTTATCAAGAAAATTTAGTTTCCATTGAGTTAGTAAACAGCAATGTTAAAGTTGTGTGGAAAGAGCCCCAGAGGCTGGAGAAGCTGAAAATTCTCAATCTTAGTCATTCTCATTTTCTGTCAAAGACTCCAGACTTTTCAAACTTGCCTAACCTTGAACAGTTAGTACTCACAGATTGTCCGAAGTTGTCTGAAGTTTCCCAAAGTATTGGAGATCTCAATAAAATACTTTTGATAAATTTGGAAGATTGCATTAGCCTTCAAAGCCTTCCAAGAAGCATCTATAATTTGAAATCATTAAACACTCTCATTCTTTCTGGGTGTTTAATGATTGACAAGTTGGAAGAGGATTTGGAACAAATGAAATCTTTAACCACATTGATTGCAAATAACACTGCAATAACAAGAGTGCCGTTTTCAGTAGTAAAGTCCAAAAGCATTGCATATATTTCCTTGTGTGGATATGAAGGATTCTCACATGATGTGTTTCCAGCGATCATTTGGTCTTGGATGTCACCGACAAATAATCTCCCATCCCCATTTCAAACATCTCTTGTTCCTCTAAAAGCTCCAAATAGTGGTTTCCATGACCTTTCATCTATGTCCAAGTACCTTCCATGGCTTCGATGTCTTTGGGTTGAGTGTGGCTCAGAACTTCAACTTTCTCAAGACACAGAAAGAATTTTGGATGCTTTATATGCTACAAATTGTGAAGAATTAGAATCATCCTCTGCTTTTCAAGGTTGCAGTCAAGTTCACATTTCAGGAACAAAAACTTCTCTGAAATCTCTGTTTATTCAAATAGGAATGAATTGCCAAGTCACCAATATTCTGAGAGATAACATTTTACAGAATATGGATGTCAATGAAAGTGGTGGTTATTTCCTCCCCAGTGATAGTTATCCAAATTGGTTAACCTTTAATTCTGAAGGTTCTTCTGTAACTTTTGAAGTCCCTTTGGTGGAAGGACGTAACTTGAAGACAATGATGCTCGTTGTCTATAATTCAACTCCACATAATGTAACATCAAGTGGCCTTAAAAACATGTTAGTTAAAAATTACACAAAGGCTACCATTCAGCTCTATAAGAGTGATACGTTAGTCTCTTTTGAAGATGAAGAGGGTCAGAGGGTAGTATCAAGCATAGAACCCGGTAACAAAGTGGAGGTCGTTTTTGTTTTTGAGAAAAGTTTCATTGTGAAGAAGACAGCAATTTATCTGGTATATGATGCACAAGATTTGAATCTCATTGCTTGTAGAGGTGATGAAACTGAATGCTCTGTGAAGAGATTCTCTGCTGAAGACGAACACGCCGACGACTTCAATCAGAACAGAAAGAAGAAAAACCGAGTGGAATGA 3258 0.3766 MENKFPPESFYHYSSIERKPIPRMKNNLPRTRQRKASPPRSRPELVRIHDVFLSFRGEDTRSSFTSHLYSALQKDGIKIFLDDNELQRGDYISTSLSRSIEQSQVSIIVFSKNYANSRWCLDELEKIMKCRRTIGQVVVPVFYHVDPSEVRHQTGEFGIAFQSLLNKILNEEELVLRWREALREAAGLAGFTVLNSRNESEAIKDIVENVTHLLGKTDLFIADNPVGVESRVRDVIQLLDIQRSNGVILLGIWGMGGIGKTTLAKSIYNEIGRNFEGRSFLANIREVWEQNVGPIYLQKQILFDICNETKTRIQNVESGKSILKDRLFHKRVLLVLDDVNTFDQLNALCGRSIWLGPGSRIIITTRNMKILRGNRVDQVYKMKIMDESESIELFSWHAFKQAGPREGFAGISRNVVEYSGGLPLALEVLGSYLFDMGIEEWKCALEKLKRIPNDQVQKKLKISYDALSDDTEKEIFLDIACFFIGMDRNDVIHILNGSEFFAEIGVSVLVERSLVTVDDRNKLQMHDLLRDMGREIVREKSPKEPEERSRLWFNKDVIDVLSEKTGTKAVEGLALKLPTANGKCFSTKAFKEMKKLRLLQLASVQLEGDFEYLSRNLIWLSWNGFPLKCIPSSFYQENLVSIELVNSNVKVVWKEPQRLEKLKILNLSHSHFLSKTPDFSNLPNLEQLVLTDCPKLSEVSQSIGDLNKILLINLEDCISLQSLPRSIYNLKSLNTLILSGCLMIDKLEEDLEQMKSLTTLIANNTAITRVPFSVVKSKSIAYISLCGYEGFSHDVFPAIIWSWMSPTNNLPSPFQTSLVPLKAPNSGFHDLSSMSKYLPWLRCLWVECGSELQLSQDTERILDALYATNCEELESSSAFQGCSQVHISGTKTSLKSLFIQIGMNCQVTNILRDNILQNMDVNESGGYFLPSDSYPNWLTFNSEGSSVTFEVPLVEGRNLKTMMLVVYNSTPHNVTSSGLKNMLVKNYTKATIQLYKSDTLVSFEDEEGQRVVSSIEPGNKVEVVFVFEKSFIVKKTAIYLVYDAQDLNLIACRGDETECSVKRFSAEDEHADDFNQNRKKKNRVE* 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0430 1085 SUPERFAMILY Toll/Interleukin receptor TIR domain 47 191 IPR035897 -
Mtr6g0430 1085 CDD AAA 226 367 - -
Mtr6g0430 1085 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 55 1042 - -
Mtr6g0430 1085 SUPERFAMILY "Winged helix" DNA-binding domain 455 561 IPR036390 -
Mtr6g0430 1085 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 55 1042 IPR044974 GO:0006952
Mtr6g0430 1085 SMART till_3 48 188 IPR000157 GO:0007165
Mtr6g0430 1085 ProSiteProfiles TIR domain profile. 47 214 IPR000157 GO:0007165
Mtr6g0430 1085 MobiDBLite consensus disorder prediction 21 41 - -
Mtr6g0430 1085 Gene3D Ribonuclease Inhibitor 578 920 IPR032675 -
Mtr6g0430 1085 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 479 IPR027417 -
Mtr6g0430 1085 SUPERFAMILY L domain-like 575 898 - -
Mtr6g0430 1085 Pfam TIR domain 49 213 IPR000157 GO:0007165
Mtr6g0430 1085 PRINTS Disease resistance protein signature 249 264 - -
Mtr6g0430 1085 PRINTS Disease resistance protein signature 326 340 - -
Mtr6g0430 1085 PRINTS Disease resistance protein signature 419 433 - -
Mtr6g0430 1085 PRINTS Disease resistance protein signature 657 673 - -
Mtr6g0430 1085 Gene3D - 384 468 IPR042197 -
Mtr6g0430 1085 Pfam NB-ARC domain 229 466 IPR002182 GO:0043531
Mtr6g0430 1085 Gene3D - 46 220 IPR035897 -
Mtr6g0430 1085 Gene3D - 221 379 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0430 Mtr-Chr6 5142755 5147870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0430 39 774 WRKY Transcription Factor Family AT4G12020 31.474 2.13e-85 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0430 - - cam:101494533 1496.49