Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0429 ATGGCGAGACCTGGTGTTGGAAATATCGTGAAAAGTATTGCTAAATTCACTCTTGCAACAGTAATGGGTAATCCAAAAGATGTTATCGCAAGCTTACTGGAAAATATGCTGGCAGGATCATTAAGGAGCTATGAAGTGTTCTTAAGTTTCAGAGGCGAGGACACGCGCACTTCATTCACTTCACACCTATACGCTTCTCTTCAAAACAATGGAATTAGCGTTTTTAAGGACGATGATTCACTTCAAAGAGGAGATCACATTTCAAAATCACTACTACAAGCAATTGAAGAGTCTCAAATTTCTGTTATCATTTTCTCAAAAAACTATGCAGATTCACGGTGGTGTTTGGATGAGTTGGTGAAAATAATGAAATGTCGCAGAACTATAGGGCAGATAGTGTTGCCGGTGTTCTATGATGTTGATCCTTCGGATGTACGACACCAAACAGGTGAGTTTGGAAAAGCGTTCCAAAGTCTCTTGAGCAGAATTTCAAAGAAGAAAAGCACGTCCCTGAAATGGAGAGATGCACTTCGTGAGGCTGCTGAGCTTGCTGGCTTTTCAGACTTGTTTGTTGCTGATAATCCGGTGGGACTCGAATCTCGAGTGCAAGATATGATTCAATTGCTAGACATCCAACAATCTAATGATGTTCTACTGATAGGGATGTGGGGTATGGGAGGTATTGGTAAAACTACCTTAGCCAAAGATATTTTCAACAAAATCGGTCGTAATTTTGAAGGTAGGAGCTTCATTCCCAATATTAGGGAAGTTTGGGGGCAACCTGCTGGACAAGTGGATTTACAACAACAACTTCTATCTGATATCTTTAAAGGAACGTCGACCAAGATACAAAGTATTGATTCAGGAAAAGTATTATTAAAGGATAGACTTTGTCATAAGAGAGTATTTATCATACTTGACGATGTCGATGAGTTGGAGCAGTTGGATGCTTTGTGTGGAAGTCGTAATTGGTTTGGTTCAGGAAGTAGAATTATTATCACTACCAGAAACAAGGACATACTTAGAGGGGATAGAGTTGACAAAGTATACTCTAATAAAGAAATGGATGAAAGTGAATCAATTGAGCTCTTTAATTGGCATGCATTCAAACAAGTGAGTCCCATAGAAGAATTTGTTGAAATTTCCAAAAATGTTGTTAAGTATTCTGGGGGATTGCCGTTAGCTCTAGAAGTTCTTGGGCGCTATTTGTTTGAGAAGAAGGTAACAGAATGGAATTGTGTATTGAAGAAACTAGAAAGAATTCCTAATGACAAAGTACAAAAGAAGTTAAAAATAAGCTATGATGGTTTAGACGATGATTACCAGAAATCAATATTCCTCGACGTAGCTTGTTTCTTTATTGGGATGGACAGAAATGATGTTATACATATATTAAATGGCTGTGGATTTTTTGCAGAAGATGGAATAAGTGTCCTGGTTGAGCGAAGCTTAGTAACGGTTGATAATAAAAACAAGCTTGGAATGCATAATTTGTTGCGGGATATGGGAAGAGAAATCATTTGTAATAAACCACGAATGGAGCCTGAGGAGCGTAGCAGGTTGTGGTTTCTTGAGGATGTTGATGATGTGTTAGCAGGACAAACCGGAACAAAAGCTGTTGAGGGATTGACTTTGAAGTTGCCAAGAGATAGTGCGAAATGTTATAGTACTAAAGCATTTGAGAACATGAAGAAACTCAGGTTGCTTCAACTTGCTGGTGTGCAACTTGATGGGGATTTTGAGTATCTTTCAAGAAATCTGAGATGGCTTTCTTGGAATGGATTTCCTTTATCATGCATTCCTTCAAGCTTTTATCAAGGAAATTTAGTTTCCATCGAGTTAGAAAACAGCAATGTCGAAGTTGTGTGGGAAGCGACTCAGAGGATGGAGAAGCTGAAAATTCTTAATCTTAGTCATTCTCATTATCTGACAGAGACCCCAGACTTTTCAAACATGCCTAATCTTGAAAAGCTTATACTCATAGATTGCCCAAGGTTGCGTGAGGTTTCCCATAGCATTGGACATCTCGATAAAATTCTTCTGATAAACTTGGAAGATTGTATTAGCCTTCAGAGTCTTCCAAGAAGTATCTATAAGTTGAAATCTTTGAAAACACTCATTCTTTCTGGGTGTTCGATGATTGACAAGTTGGAAGAGGACTTGGAACAAATGGAATCTTTAACTACTCTGCTTGCAAATAACACTGCAATAACAAGAGTGCCCTTGTCAATAGTAAGGTCAAAAAGCATTGGATACATCTCTTTGTGCGGCTATGAAGGATTCTCACGTGATATATTTCCATCAATCATTTGGTCTTGGATGTCACCAACAAGTTCTCTTTCATCCCCCTTTCAAACATCTTCTGCCAATATTTCATCTCTCGTTTCTTTAGATATACCACATAGTAGTTCTCAGGAACTGTCATCTATTTCCGACCACCTTTCAAGGCTTCGAAGTCTATGGGTAGAGTGTGGTTCAGAACTTCAACTTTCTGTAGATGCAAAAATCATTTTGGATGCTTTATATGCCACAATTTCTAAGGAAATGGATTCGACTTCTGCTACTTCAAAAATATCAAATATGAACACTTCTGCATTAATTCAACACTGCAGTCAATTGCGTGCTTCCGAATCAAAATATTTGTTGAAGTCTGTTCTACTACAACTGGGAATGAATTCTGAAGTCACCAATAATCTGAAAGAAAGCATTTTACAGAATATGGATGAGAATGGGTGTGGTGGTTGTTTGTTTCCTAGTGATAGTTGTCCAGATTGGTTAACCTTCAATTGCGAAGGTTCTTCGGTAATGTTTGAAGTCCCTCAAGTGGAAGGGTGCACTTTAAAGACAATGATGATATGCATTGACTATTCTTCAACCCTGGATAATATAACATCAAATGGCCTTGCAAACTTGTTGGTAAAGAATTACACAAAAGCCACCATTCAGCTTTATAAGAGAGAGGCATTAGCCTCCTTTGAAGATGAAGAGGGTCAGAGAGTAGTATCAAGTATAGAACCTTGTAACAAAGTGGAGGTTGTTGCTGTTTTTGAGAACGGTTTCATTGTGAAGAAAACAACAGTTTATCTCGTATATGATGAACCAATTGGAGAAAAAATGGAGCAATGCCAAGAACAAGAAGAAATTGTGTGTAGTGGTGATGAAGATGAATGCTTTGTCAGAGAAGTCTCTTCTAATGCACAAGATTACAATGTCATTGTTAGTAGTGGTGATGAAAATGAATGTGTTGTCAGAAATGTCTCTCCTCAAGTGGCTCTGGCTCCCATGGAGGATTTACAACATAACAGAAGGAAGAAAGTTTTCAAGTGGAGATGGAAGACGGTTAAACAATGGTTTTGTAAAATTTAA 3366 0.3812 MARPGVGNIVKSIAKFTLATVMGNPKDVIASLLENMLAGSLRSYEVFLSFRGEDTRTSFTSHLYASLQNNGISVFKDDDSLQRGDHISKSLLQAIEESQISVIIFSKNYADSRWCLDELVKIMKCRRTIGQIVLPVFYDVDPSDVRHQTGEFGKAFQSLLSRISKKKSTSLKWRDALREAAELAGFSDLFVADNPVGLESRVQDMIQLLDIQQSNDVLLIGMWGMGGIGKTTLAKDIFNKIGRNFEGRSFIPNIREVWGQPAGQVDLQQQLLSDIFKGTSTKIQSIDSGKVLLKDRLCHKRVFIILDDVDELEQLDALCGSRNWFGSGSRIIITTRNKDILRGDRVDKVYSNKEMDESESIELFNWHAFKQVSPIEEFVEISKNVVKYSGGLPLALEVLGRYLFEKKVTEWNCVLKKLERIPNDKVQKKLKISYDGLDDDYQKSIFLDVACFFIGMDRNDVIHILNGCGFFAEDGISVLVERSLVTVDNKNKLGMHNLLRDMGREIICNKPRMEPEERSRLWFLEDVDDVLAGQTGTKAVEGLTLKLPRDSAKCYSTKAFENMKKLRLLQLAGVQLDGDFEYLSRNLRWLSWNGFPLSCIPSSFYQGNLVSIELENSNVEVVWEATQRMEKLKILNLSHSHYLTETPDFSNMPNLEKLILIDCPRLREVSHSIGHLDKILLINLEDCISLQSLPRSIYKLKSLKTLILSGCSMIDKLEEDLEQMESLTTLLANNTAITRVPLSIVRSKSIGYISLCGYEGFSRDIFPSIIWSWMSPTSSLSSPFQTSSANISSLVSLDIPHSSSQELSSISDHLSRLRSLWVECGSELQLSVDAKIILDALYATISKEMDSTSATSKISNMNTSALIQHCSQLRASESKYLLKSVLLQLGMNSEVTNNLKESILQNMDENGCGGCLFPSDSCPDWLTFNCEGSSVMFEVPQVEGCTLKTMMICIDYSSTLDNITSNGLANLLVKNYTKATIQLYKREALASFEDEEGQRVVSSIEPCNKVEVVAVFENGFIVKKTTVYLVYDEPIGEKMEQCQEQEEIVCSGDEDECFVREVSSNAQDYNVIVSSGDENECVVRNVSPQVALAPMEDLQHNRRKKVFKWRWKTVKQWFCKI* 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0429 1121 SUPERFAMILY L domain-like 545 822 - -
Mtr6g0429 1121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 448 IPR027417 -
Mtr6g0429 1121 Gene3D - 354 438 IPR042197 -
Mtr6g0429 1121 SUPERFAMILY "Winged helix" DNA-binding domain 424 531 IPR036390 -
Mtr6g0429 1121 SUPERFAMILY Toll/Interleukin receptor TIR domain 43 186 IPR035897 -
Mtr6g0429 1121 PRINTS Disease resistance protein signature 219 234 - -
Mtr6g0429 1121 PRINTS Disease resistance protein signature 296 310 - -
Mtr6g0429 1121 PRINTS Disease resistance protein signature 389 403 - -
Mtr6g0429 1121 PRINTS Disease resistance protein signature 698 714 - -
Mtr6g0429 1121 Pfam TIR domain 44 179 IPR000157 GO:0007165
Mtr6g0429 1121 Gene3D Ribonuclease Inhibitor 543 690 IPR032675 -
Mtr6g0429 1121 Gene3D - 34 180 IPR035897 -
Mtr6g0429 1121 Gene3D Ribonuclease Inhibitor 691 878 IPR032675 -
Mtr6g0429 1121 SMART till_3 43 183 IPR000157 GO:0007165
Mtr6g0429 1121 Gene3D - 190 348 IPR027417 -
Mtr6g0429 1121 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 50 1031 - -
Mtr6g0429 1121 Coils Coil 714 734 - -
Mtr6g0429 1121 ProSiteProfiles TIR domain profile. 42 209 IPR000157 GO:0007165
Mtr6g0429 1121 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 50 1031 IPR044974 GO:0006952
Mtr6g0429 1121 Pfam NB-ARC domain 199 435 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0429 Mtr-Chr6 5135942 5141044 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0429 15 744 WRKY Transcription Factor Family AT4G12020 31.266 1.67e-89 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0429 - - cam:101512894 1493.4