Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0428 ATGGACAAGCTAAAAGCAAAGGAGGAACCAGCCTCATTCGTATTGAAAGTCCCTCTTCACTGTGAAGGATGCGTCACAAAGATAAAAAAATTAGTTTATAAAAAGAAAGGTGTGGAGAGAGTTGAATATGATCTGTCCGGTAATAGATTGAAGGTTTTTGGAAAAGCTGACCCGGAGAAGGTGCGAGATGAATTACAGACTCAGCTTAAGAGGAAGTTGGGGCTTTCCCTGGAAAATAGACTTTATGAAGTGTTCTTAAGTTTTAGAGGAAAAGATACTCGTGCATCATTCACTTCACATCTCTATGCTGCACTTCAAAACGCTGGACTTAACGTTTTTAGGGACGATGATTCTCTTGAAAGAGGAGATCAAATACCAACATCATTACTTCATTCGATTGAAGAATCTCGAATTTCTGTGATTGTTTTTTCAAGAAATTATGCGGATTCGCGATGGTGTCTAAATGAGTTAGTAAAGGTAATGGAGTGTCAGCTAACCATAGGGCAGATAGTTTTGCCAGTGTTCTACGATGTAGATCCCTCTGAAGTACGTCACCAGAAAGGCAAGTTTGGTAAAGCATTTCAAAATCTCTTAAATAGAATTTCAAAGGAGGTAGACGAGTCCCTTTCACAGGAGGAGAAAGATGAGTTGTTGCATCGTAAGTTGAGCTGGATAGAGGCGCTTCAAAGGGCGACTAACATTGCCGGATTTGTAGTCCTAGATTCCAAGAATCAAAATAAGGTCATCAAGGATATTGTTGAAAAAATTACTCATTTGCTTGATAAGACAGATTTGTTCATTGCTGATAATCCTGTGGGAGTTGGTTCTCGAGTGCAAGATGTTATTGAACTGCTAGACATCCAACACTCCAATGATGTACTGCTACTTGGGATGTGGGGTATGGGGGGGATTGGCAAAACAACCATTGCAAAAGCTATCTATAATGAAATTGGCCGTAATTTTGAAGGTAGGAGCTTCCTTGCAAATGTTAGGGAAGTTTGGGATGAGAATGCTGGAAAAGTGAATTTACAGGAACAACTTCTCTTTGACATCTACAAAGATATGACGATCAAAATACAAAGCATTGAAAGTGGAAAAATCATATTAAAGGATAGACTCTGCCATAAAAGAGTACTAATTTTACTCGATGACGTTAATACATTGGACCAACTAAATGCTTTGTGCGGAAGTCATAAATGGTTTGGTTCTGGGAGTAGAATAATCATTACCACAAGGGATAGACATATACTTAGTGGGAATAGGGTTAATAAAGTATTTGAAATGAAACACATGGATGAAAGTGAATCAATTGAGCTATTTAGTTGGCACGCATTCAAGCAAGCGAGTCCTACAAACGATTTTGTTGAAATTTCTAGAAATGTAGTTAAGTATTCTGGGGGGTTGCCACTAGCATTGGAAGTCCTAGGGTCACATTTATTCAATAGGGAGGTAACAGAATGGAAAAGTGCGTTGGACAAACTCAAAAGAATTCCTAATAATCAAGTACATAAGAAGTTACGAATAAGCTACGATGCTTTAAATGATGACTTTGAGAAAGAAATATTCCTTGATGTAGCTTGTTTCTTTATAGGGATGGACCGAAATGACGTTACACTTATATTAAATGGATGTGAACTTTTTGGTGAAATTGGAATAAGCATCCTTGTTGAGCGTAGTCTTGTTACTGTTGATGGTAAGAACAAACTTGGAATGCATGATTTGTTGCGAGATATGGGAAGAGAAATCATTCGTGAGAAATCACCAGAGGAGATCGAGGAGCGTTGCAGGTTGTGGTTTCATGACGATGTGCTTCATGTATTATCAGAACAAACTGGAACAAAAACTATTAAGGGGCTGGCTTTGAAGTTGCAAAGAGCTAATGAAAAATGTTTCAGTACTAAAGCATTCAAGAAGATGAAGAGACTTAGATTGCTTCAACTTGCTGGGGTCAAACTTGTTGGAGATTTTAAATATATTTCGAGAAGTCTGAGATGGCTGTCTTGGAATAGATTTTCTTCAACACATATACCTACAAACTTTTATATAGAAAATTTAGTTTCCATCGAGTTAGAGAATAGCAATATCAAACTTTTATGGAAAGAAGCCCAGATGATGGAAAAGCTAAAAATTCTAAATCTTAGTCATTCTCATTGTCTGACGCACACCCCAGACTTTTCATACATGCCTAATCTTGAGAAGCTGGTACTCAAAGATTGTCCAATGTTGTCTGAGGTTTCTCCTAGCATTGGAAATCTCAGTGAAATTCTTCTAATAGATTTGGAAGATTGTGTTAGCCTTCGAAGCCTTCCAAGAAGCATCTATAAGTTGAAATCTCTGAAAATTTTAATTCTTTCAGGGTGTATAATGATTGACAAGTTGGAAGAGGACATAGAACAGATGGAATCTTTAACCACTCTGCTTGCACACGACACTGCAATAAAAAGAGTACCCTTTTCAGTAGTAAGGTCAAAAAGCATTGGATACATCTCTTTGGGCGGCTATGAAGGATTTTCTCGTGATGTGTTTCCATCTATCATTTGGTCTTGGATGTCACCAACAAATAATCTCCCATCTCCATTTCAAACATCTGCTGCCATGTCATCTCTTGTTCCTTTAGATGTACCACATAGTAATTCCCAGGAACTATCATCGATTTCCCAGTGTCTTCCAAGTCTTCGAAGTCTATGGGTGGAGTGCAGCTCGGAACTTCAACTTTCTCATGATGCAGCAATAATTTTGGATGCCCTGTATGCCACAAATTCTAAGAATTTGGAACCAACTACAGCTACATCACAATTATCAAATGTGACTACTTCTACATCCCAAGTATCAAAACATTCCTCGAAGTCTCTTTTAATTCAAATTGGAATGAATTGCCAAGCCACTAATATTCTGAAAGATATAATTTTACAGAATATGGATGGCAATGGGAGTGGTGGTTGTTTCCTCCCCAGTGATAGTTATCCAAATTGGTTAACCTATAATTCTGAAGGTTCTTCTGTGAAATTTGAAGTTCCTCAAGTGGAAGGGCGTAACTTGAAGACAATGATGTGCATTGTCTATACTTCAACCCCAGATAATGTAACATGTAGTGGCCTTAAAAACATGTTATTGAAAAATTACACAAAGGCCACCATTCAGCTTTATAAGAGTGAGGCATTGGCCTCCTTTGAAGATGAAGAGGGGCAGAGGGTAGTATCAAGTCTAGAACCTGGTAACAAAGTGGAGGTCCATTTTGTTTTCGAGATTAATTTCATTGTGAAGAAGACAACAGTTTATCTTGTATACGATGAACCAGTTTCAAATACAATGGAGCTGTATCATGTACAAGATTTGAATGCAATTTCTTGTAGTAATGATGAAAATGAACTCTCTGTCAAGAGATTAGCTTCTGAAGGGGATCCCATTGATGACTGCAATCAAAACAGAAAGAAGAAAGGCCAGGTGGAATGA 3453 0.3788 MDKLKAKEEPASFVLKVPLHCEGCVTKIKKLVYKKKGVERVEYDLSGNRLKVFGKADPEKVRDELQTQLKRKLGLSLENRLYEVFLSFRGKDTRASFTSHLYAALQNAGLNVFRDDDSLERGDQIPTSLLHSIEESRISVIVFSRNYADSRWCLNELVKVMECQLTIGQIVLPVFYDVDPSEVRHQKGKFGKAFQNLLNRISKEVDESLSQEEKDELLHRKLSWIEALQRATNIAGFVVLDSKNQNKVIKDIVEKITHLLDKTDLFIADNPVGVGSRVQDVIELLDIQHSNDVLLLGMWGMGGIGKTTIAKAIYNEIGRNFEGRSFLANVREVWDENAGKVNLQEQLLFDIYKDMTIKIQSIESGKIILKDRLCHKRVLILLDDVNTLDQLNALCGSHKWFGSGSRIIITTRDRHILSGNRVNKVFEMKHMDESESIELFSWHAFKQASPTNDFVEISRNVVKYSGGLPLALEVLGSHLFNREVTEWKSALDKLKRIPNNQVHKKLRISYDALNDDFEKEIFLDVACFFIGMDRNDVTLILNGCELFGEIGISILVERSLVTVDGKNKLGMHDLLRDMGREIIREKSPEEIEERCRLWFHDDVLHVLSEQTGTKTIKGLALKLQRANEKCFSTKAFKKMKRLRLLQLAGVKLVGDFKYISRSLRWLSWNRFSSTHIPTNFYIENLVSIELENSNIKLLWKEAQMMEKLKILNLSHSHCLTHTPDFSYMPNLEKLVLKDCPMLSEVSPSIGNLSEILLIDLEDCVSLRSLPRSIYKLKSLKILILSGCIMIDKLEEDIEQMESLTTLLAHDTAIKRVPFSVVRSKSIGYISLGGYEGFSRDVFPSIIWSWMSPTNNLPSPFQTSAAMSSLVPLDVPHSNSQELSSISQCLPSLRSLWVECSSELQLSHDAAIILDALYATNSKNLEPTTATSQLSNVTTSTSQVSKHSSKSLLIQIGMNCQATNILKDIILQNMDGNGSGGCFLPSDSYPNWLTYNSEGSSVKFEVPQVEGRNLKTMMCIVYTSTPDNVTCSGLKNMLLKNYTKATIQLYKSEALASFEDEEGQRVVSSLEPGNKVEVHFVFEINFIVKKTTVYLVYDEPVSNTMELYHVQDLNAISCSNDENELSVKRLASEGDPIDDCNQNRKKKGQVE* 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0428 1150 Gene3D - 268 425 IPR027417 -
Mtr6g0428 1150 ProSiteProfiles Heavy-metal-associated domain profile. 19 66 IPR006121 GO:0046872
Mtr6g0428 1150 SMART till_3 81 234 IPR000157 GO:0007165
Mtr6g0428 1150 ProSiteProfiles TIR domain profile. 80 256 IPR000157 GO:0007165
Mtr6g0428 1150 SMART AAA_5 292 432 IPR003593 -
Mtr6g0428 1150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 260 524 IPR027417 -
Mtr6g0428 1150 Gene3D - 77 267 IPR035897 -
Mtr6g0428 1150 Gene3D - 430 514 IPR042197 -
Mtr6g0428 1150 SUPERFAMILY L domain-like 621 906 - -
Mtr6g0428 1150 Gene3D Ribonuclease Inhibitor 609 947 IPR032675 -
Mtr6g0428 1150 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 87 1096 - -
Mtr6g0428 1150 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 87 1096 IPR044974 GO:0006952
Mtr6g0428 1150 PRINTS Disease resistance protein signature 295 310 - -
Mtr6g0428 1150 PRINTS Disease resistance protein signature 372 386 - -
Mtr6g0428 1150 PRINTS Disease resistance protein signature 465 479 - -
Mtr6g0428 1150 PRINTS Disease resistance protein signature 703 719 - -
Mtr6g0428 1150 Pfam NB-ARC domain 278 512 IPR002182 GO:0043531
Mtr6g0428 1150 Gene3D - 8 72 - -
Mtr6g0428 1150 SUPERFAMILY Toll/Interleukin receptor TIR domain 77 198 IPR035897 -
Mtr6g0428 1150 SUPERFAMILY HMA, heavy metal-associated domain 14 66 IPR036163 GO:0046872
Mtr6g0428 1150 SUPERFAMILY "Winged helix" DNA-binding domain 501 607 IPR036390 -
Mtr6g0428 1150 Pfam TIR domain 82 256 IPR000157 GO:0007165
Mtr6g0428 1150 Pfam Heavy-metal-associated domain 15 67 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0428 Mtr-Chr6 5117656 5124337 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0428 82 820 WRKY Transcription Factor Family AT4G12020 30.567 2.17e-80 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0428 - - mtr:MTR_6g015695 1657.5