Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0427 ATGTCTTCAACTCCGAGATATAGATTTAGCAGTAACTTAAGTGAGCGGAGTAAGCTTCTTTCTTCCGAAGAGAGACAAAACAGACTACTCGTAGCAGAAATGGTTGCACAAGCGGCGATTGAATTTGAATATAAGTACATGCGGGAACATGAAGTGTTCTTAAGTTTTAGAGGGGAAGATACGCGCGCATCATTCACTTCACATCTCTATGCTTCTCTTCAAAATGCTGGAATTAAAGTTTTTAGGGATGATGATTCTCTTAAAAGAGGAGATCACATTTCAACATCAATACATCTAGCTATCCAAAAGTCTCAGATCTCTGTGATTGTTTTTTCAAGAAACTATGCAAATTCGCGATGGTGTCTCGAAGAGTTGGTGAAAATAATGGATTGTCGTAGAACACAAGGGCAGTTGGTTTTGCCAGTGTTTTATGATGTAGATCCATGTGAAGTACGTCACCAAACAAGTGAGTTTGGCAAAGCATTTCAAAGTCTCTTGAATAGAATTTCAAAGGAGGAAGGACTTTATGTTAGGTTTGGAAAAGCAGTTCGAAATCTTTTGAGTAGTTTGTCGATCTATAAAGACGAGTCACCAGATCAGGTGCTGACATGGAGGACCACGCTTCGTGAGGTAGCAGGTCTTGCAGGGTTTGTAGTGCTAAATTCTAGGAACGAAAGTGAGATCATCAGGAATATTGTTGAAAAAGTTACTCACTTGCTAGACAAGACCGACTTGTTCGTTGCTCATAATCCAGTCGGAGTTGAAACTCGAGTACAAGATATGATTCAACTGCTAGACATCCAAAAATCAAATGATGTACTATTACTAGGAATGTGGGGTATGGGGGGAATTGGCAAATCCACCATTGCAAAAGCCATCTACAATAAAATTGGCCGCAATTTCGAAGGTAGGAGTTTTCTAGGAAATATTAGGGAGGTTTGGGCGAAAAATGATGGACATGTGTCTTTACAACAACAACTTCTCTTTGATATTTGCAAGGAAACGACGACAACCATGATACAATGCATTGAGGCAGGAAAACATACATTAAAGGATAGACTCTGTGGTAAAAGAGTACTTCTTGTACTTGATGATGTGAGTACGTTGGATCAATTGACTGCTTTGTGTGGAAGTCGTCAATGGTTTGGCTCGGGAAGTAGAATAATTATCACAACTAGAGATATGCATATACTGAGAGGGAATAGAGTTGACCATGTATACAAAATGAAAGAAATGGATGAAGGTGAATCAATTATGCTTTTTAGTTGGCATGCATTCAAGCAAGCGAGTCCTAGAGAAGATTTTGCTGGAATATCCAGAAGGATAGTTGAGTATTTGGGGCGACTGCCGCTAGCTCTGGAAGTTATTGGGTCGTATTTATTTGATAGGGGGATAATAGAGTGGAAGTGTGTATTGGACAAACTCAAAAGAATTCCCAATGATCAAGTGCAGAAGAAGTTAAAAATAAGCTATGACGATTTAAATGATGTTCTTGTGAAAGAAATATTCCTTGACATAGCTTGTTTCTTTATTGGGATGGACCGAAATGATGTCATACATATATTAAATGGCTGTGAACTTTATGCAGAAATTGGAATAAATGTCCTACTGGAGCGAAGCCTTGTGACTGTTGATGATATGAATCGGCTTGGAATGCATGATTTGTTGCGAGACATGGCAAGAGAAATCATACGCGAGGAATCACCAAAAGAGGTTGAGAATCGGAGTAGATTGTGGTTTAGTACGGATGTGCTTAATGTGTTATCTGAACAAACTGGAACAAAAGTTGTTGAGGCGCTAGTTTTGAAGTTGCCAATATCTAGTTCAAAATGTTTTAGTACTAAAGCATTTAAGAAGATGACAAGACTGAGATTGCTTCAACTTACTGGAGTACAACTTGATGGGGATTTTGAATACATTTCGAGAAATCTGAGATGGCTTTCTTGGAATGGATTTCCTCTAACATGCATACCCACAAGCTTTTATCTAGGAAATTTAGTTTCCATTGAGTTAGAAAATAGCAATATCAAACTTCTGTGGAAAGAAACCCAGAGGATGGAGAAGCTAAAAATTCTCAAGCTTAGTCACTCTCATTATTTGACACAGACCCCAAACTTTTTAAACTTGCCTAATCTTGAACAACTAGTACTCTCTGATTGTCCAATGTTGTCTGAAGTTTCTCATAGTATTGGATATCTCAATAAAATTCTTCTGATAAATTTGGAAGATTGTACTAGCCTTCGAAGTCTTCCAAGAAGTATATATAGGTTGAAATGTCTAGAAATGTTACAAAGTGCAGGGACCAATACCAATGGTTTTGTTTTTTTTTTTAACAGAAAGTTAATAGAGGGACCAATACCAATA 2364 0.3786 MSSTPRYRFSSNLSERSKLLSSEERQNRLLVAEMVAQAAIEFEYKYMREHEVFLSFRGEDTRASFTSHLYASLQNAGIKVFRDDDSLKRGDHISTSIHLAIQKSQISVIVFSRNYANSRWCLEELVKIMDCRRTQGQLVLPVFYDVDPCEVRHQTSEFGKAFQSLLNRISKEEGLYVRFGKAVRNLLSSLSIYKDESPDQVLTWRTTLREVAGLAGFVVLNSRNESEIIRNIVEKVTHLLDKTDLFVAHNPVGVETRVQDMIQLLDIQKSNDVLLLGMWGMGGIGKSTIAKAIYNKIGRNFEGRSFLGNIREVWAKNDGHVSLQQQLLFDICKETTTTMIQCIEAGKHTLKDRLCGKRVLLVLDDVSTLDQLTALCGSRQWFGSGSRIIITTRDMHILRGNRVDHVYKMKEMDEGESIMLFSWHAFKQASPREDFAGISRRIVEYLGRLPLALEVIGSYLFDRGIIEWKCVLDKLKRIPNDQVQKKLKISYDDLNDVLVKEIFLDIACFFIGMDRNDVIHILNGCELYAEIGINVLLERSLVTVDDMNRLGMHDLLRDMAREIIREESPKEVENRSRLWFSTDVLNVLSEQTGTKVVEALVLKLPISSSKCFSTKAFKKMTRLRLLQLTGVQLDGDFEYISRNLRWLSWNGFPLTCIPTSFYLGNLVSIELENSNIKLLWKETQRMEKLKILKLSHSHYLTQTPNFLNLPNLEQLVLSDCPMLSEVSHSIGYLNKILLINLEDCTSLRSLPRSIYRLKCLEMLQSAGTNTNGFVFFFNRKLIEGPIPI 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0427 788 Gene3D - 411 495 IPR042197 -
Mtr6g0427 788 Gene3D - 248 405 IPR027417 -
Mtr6g0427 788 Gene3D - 45 247 IPR035897 -
Mtr6g0427 788 Pfam NB-ARC domain 255 498 IPR002182 GO:0043531
Mtr6g0427 788 Pfam TIR domain 50 236 IPR000157 GO:0007165
Mtr6g0427 788 SUPERFAMILY Toll/Interleukin receptor TIR domain 49 165 IPR035897 -
Mtr6g0427 788 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 56 763 - -
Mtr6g0427 788 Gene3D Ribonuclease Inhibitor 582 771 IPR032675 -
Mtr6g0427 788 SMART till_3 49 186 IPR000157 GO:0007165
Mtr6g0427 788 SUPERFAMILY L domain-like 602 769 - -
Mtr6g0427 788 ProSiteProfiles TIR domain profile. 48 212 IPR000157 GO:0007165
Mtr6g0427 788 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 56 763 IPR044974 GO:0006952
Mtr6g0427 788 PRINTS Disease resistance protein signature 275 290 - -
Mtr6g0427 788 PRINTS Disease resistance protein signature 353 367 - -
Mtr6g0427 788 PRINTS Disease resistance protein signature 446 460 - -
Mtr6g0427 788 PRINTS Disease resistance protein signature 684 700 - -
Mtr6g0427 788 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 240 506 IPR027417 -
Mtr6g0427 788 SUPERFAMILY "Winged helix" DNA-binding domain 482 588 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0427 Mtr-Chr6 5109204 5113097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0427 48 772 WRKY Transcription Factor Family AT4G12020 29.879 7.86e-80 279