Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr6g0426 | ATGAACACAGTAGTTAACAACAGAAAAGAAATGGATCGGATAAAAGGTCCGTGGAGTCCAGAAGAAGATGAAGCACTTCAAAAGCTCGTGGAAAAGCACGGTGCGAGAAACTGGTCGATTCTAAGCAAATCGATACCAGGCCGGTCAGGGAAATCATGCAGGTTACCTTGGTGTAATCAGCTTTCACCACAAGTTGAGCGTGGGGCTTTTACACCTGAAGAGGATGAAGCTATAATCAGAGCCCACGCTCGATTTGGAAACAAATGGGCTACAATAGCCAGGCTTTTACCGGGGCAAACTGATAACGCTGTTAAGAATCATTGGAACATTACTTTGAAACATAAGTGTTCTTCTATTATAATGGATGAAGTGTTCCTGAGTTTTCGAGGGGAAGACACTCGTTCATCCTTCACTTCACATCTTCACTCATCTCTTCAAAAGGCTGGAATTAAAGTCTTCATGGACGATGATTCACTTCAAAGAGGAGATCACATTTCAACATCACTATTGCAATCAATTGACCGATCTCAAATTTCTCTTATTGTTTTCTCCACTAATTATGCTGGATCCCGATGGTGTTTGGAAGAGTTAGTTCAGATAATGAAGTGTCACAGATTTGGTGGGAACTACTAG | 633 | 0.4171 | MNTVVNNRKEMDRIKGPWSPEEDEALQKLVEKHGARNWSILSKSIPGRSGKSCRLPWCNQLSPQVERGAFTPEEDEAIIRAHARFGNKWATIARLLPGQTDNAVKNHWNITLKHKCSSIIMDEVFLSFRGEDTRSSFTSHLHSSLQKAGIKVFMDDDSLQRGDHISTSLLQSIDRSQISLIVFSTNYAGSRWCLEELVQIMKCHRFGGNY* | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr6g0426 | 210 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 10 | 61 | IPR017930 | - | |
Mtr6g0426 | 210 | PANTHER | MYB PROTEIN-RELATED | 8 | 163 | - | - | |
Mtr6g0426 | 210 | Gene3D | - | 68 | 122 | - | - | |
Mtr6g0426 | 210 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - | |
Mtr6g0426 | 210 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
Mtr6g0426 | 210 | Gene3D | - | 14 | 66 | - | - | |
Mtr6g0426 | 210 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 123 | 205 | IPR035897 | - | |
Mtr6g0426 | 210 | SMART | till_3 | 121 | 209 | IPR000157 | GO:0007165 | |
Mtr6g0426 | 210 | Pfam | TIR domain | 124 | 205 | IPR000157 | GO:0007165 | |
Mtr6g0426 | 210 | ProSiteProfiles | TIR domain profile. | 120 | 210 | IPR000157 | GO:0007165 | |
Mtr6g0426 | 210 | ProSiteProfiles | Myb-like domain profile. | 10 | 61 | IPR001005 | - | |
Mtr6g0426 | 210 | SUPERFAMILY | Homeodomain-like | 12 | 108 | IPR009057 | - | |
Mtr6g0426 | 210 | CDD | SANT | 17 | 59 | IPR001005 | - | |
Mtr6g0426 | 210 | PANTHER | TRANSCRIPTION FACTOR MYB73 | 8 | 163 | - | - | |
Mtr6g0426 | 210 | Pfam | Myb-like DNA-binding domain | 18 | 76 | - | - | |
Mtr6g0426 | 210 | SMART | sant | 14 | 63 | IPR001005 | - | |
Mtr6g0426 | 210 | SMART | sant | 66 | 114 | IPR001005 | - | |
Mtr6g0426 | 210 | CDD | SANT | 69 | 109 | IPR001005 | - | |
Mtr6g0426 | 210 | Gene3D | - | 123 | 210 | IPR035897 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr6g0426 | Mtr-Chr6 | 5099338 | 5100526 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr6g0426 | 8 | 117 | MYB Transcription Factor Family | AT4G37260 | 80.000 | 4.46e-62 | 194 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Mtr6g0426 | TIR | 7.4e-26 | CL0173 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr6g0426 | K09422 | - | mtr:MTR_6g015455 | 405.216 |