Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0422 ATGTCTTCCTCTAGTTTCTTCCCCCAAACTGCGGTAATTTCGGGTTACCAACAGGCAAGAAGAAGAACCGACACAAGGATCCATGACGTGTTCCTAAGTTTCAGAGGCAAAGATACTCGTGCTTCCTTCACTTCACATCTCTATGCTTCTCTTCAGAACGCTGGAATCAACGTTTTTAGAGACGATGATTCGCTTAAAAGAGGACATTGCATTTCAAAATCAATAAAACGAGCAATTGAAGAATCTGAAATTTCTATTATCATTTTCTCAAAAAATTATGCGAAATCGCGTTGGTGTCTAAATGAGTTGTTGACGATAATGGAGTGTCGCAGAAGCATAGGGCAGGTGGTGCTTCCGGTGTTCTATGATGTTGATCCCTCAGAAGTACGTCATCAAACTGGTGAGTTTGGAAATTCATTTGAATATCGTTGGAACAATCCAAACATAAATCTTTCAAAGACAGTCAGAGAAAAGAAGCTGCTGGTGAAGTGGAGAAAAGCACTTCTAAAGGCGGCTAGCCTAGCAGGATTTGTAGTCTTGAATTTCAGGAATGAAAGTGAGGTTATCAAGGATATTGTTAACAATGTAACGCATTTGCTTGACAAGACAGATTTGTTTATTGCTAATAATCCGGTGGGAGTTGAATCTCGAGTTCAAGATATGATTCAACTGCTAGACCAAGATATCCAACAATCAAATGATGTTCTCCTACTAGGGATGTGGGGTATGGGAGGAGTTGGTAAAACAACCATTGCCAAAGCTATTTACAATAAAATTGGCCATAATTTTGATGGTAGAAGCTTCCTTGCAAATATTAGGGAAGTTTGGGAGCAAAATGTTGGCCGGGTGAATTTACAAGAAAAACTTCTCTTTGATATCTGCAAAGAAATGACAATAAAAATACAAAGTGTTGAAAACGGAAAAAACATATTAAAGGATAGACTCTGCCATAAAAGAGTATTGATTGTACTTGATGATGTTAATACACTTGACCAACTGGATGCTTTGTGTGGAAGTTGTAAATGGTTTGGTTCGGGGAGTAGAATAATCATTACAACAAGGGATAGGCATATACTTTGTGGGGATAGGGCTAACCATGTATATGAAATGAAACACATGGATGAAAGTGAATCAATTGAGCTATTTAGTTGGCATGCATTCAAGCAAGTGAGTCCGACAAAAGATTTTATTGAATTTTCTAGAAATGTAGTTGAGTATTCTGGGGGGTTGCCACTAGCATTGGAAGTCCTTGGGTCATATTTATTCGATAGAGAAGTAAGAGAATGGAAAAGTACATTGGACAAACTCAAAAGAATTCCTAATAATCAAGTACAAAAGAAGTTAAGAATAAGCTACGATGGTTTAAATGATGACATTGAGAAAGAAATATTCCTCGATGTAGCTTGTTTCTTTATTGGGATGGACCGAAATGACGTTACACTTATATTAGATGGATGTGGACTTTTTGCAGAAATTGGAATAAGTATCCTTGTTGAGCGAAGTCTTATAACTGTTGATGATAAGAACAAACTTGGAATGCATGATTTGTTGCGAGATATGGGAAGAGAAATCATTCGTGAGAAATCACCAGAGGAGCTCGAGGAGCGTTGCAGGTTGTGGTTTCATGACGATGTGCTTCATGTATTGTCAGAACATACGGGAACAAAAGCTATTAAGGGACTGGCTTTGAAGTTGCCAAGATCCAATGAAAAATGTTTTAGTACTAAAGCATTCAAGAAGATGAAGAGACTTAGACTGCTTCAACTTTCTGGAGTAAAACTTGATGGAGATTTTGAATATCTTTCGAGAAATCTGAAATTGCTGTCTTGGAATGGATTTTCTTTAACACATATACCTAATAACTTTCATAGAGAAAATTTAGTTTCCATCGAGTTACAGAATAGCAATGTCAGTCTTTTATGGAAAGAGGACCAGAGGTTGGAAAAGCTGAAAATTCTAAATCTTAGTCATTCTCATTGTCTGACGCACACCCCTGACTTTTCATACTTGCCTAATCTTGAGAAGCTGGTACTCAAAGATTGTCCAATGTTGTCTGAGGTTTGTCCTACCATTGGAGATCTCACTGAAATACTTCTAATAGATTTGGAAGATTGTGTTAGCCTTCGTAGCCTTCCAAGAAGCATCTATAAGTTGAAATCTTTGAAAATACTCATTCTTTCTGGGTGTTTAATGATTGACAAGTTGGAAGACGACTTGGAACAAATGGAATCATTAACCACTCTTCTAGCAAACAACACTGCAATAACAACAGTGCCCTTTTCAGTAGTAAGGTCAAAAAGCATTGGATATATCTCTCTATGTGGCTATGAAGGACTTTCACATGATGTGTTTCCATCTATCATCTGGTCTTGGATGTCACCAACAAATAATCTTCCACCCCTATTTCAAACATCTAATATCATGTCATCTCTTGTTCCTCTAGATGTACCACATAGTAGTTCCCACGAACTATCATCGATTTCCATGTACCTTCCAAATCTTCGAAGTCTTTGGGTGGAGTGCAGTTCAGAACGTCAACTTTCTCATGATGCAGCAATAATTTTGGATGCCTTGCATACCATAAATCGTAAGGAGTTGGAACCAACTGCAACTACGTCACAAGTATCAAAACATTCCTTGAAGTCTCTTTTAATTCAAATTGGAATGAATTGCCAAGCCACTAATATTCTGAAAGATATAATTTTACAGAATATAGATGTCAATAGTAGTGGTGGTTGTTTGCTTCCTGGTGATAGTTATCCAAATTGGTTAACCTTTCTTTCGGAAGGTTCTTCTGTAACTTTAGAAGTCCCTCAAGTGGAAGGGCGTAACTTGAAGACAATGATGTGCATTGTCTATACTTCAACCCCAGATAACATAACATCAAGTGGCCTTAAAAATGTGTTAGTGAAAAATTACACAAAGGCCACCATTCAGCTCTATAAGAGCGAGGCATTAGTCTCCTTTGAAGATGAGGAGGCTCTGAGGGTAGTATCAAGTATAGAACCCGGTAACAAAGTGGAGGTCGTTGTTGTTTTTGAGAACAGTTTCATTGTGAAAAAGACAGCAGTTTATCTCGTATACGATGAACCATCTGTCAAGAGATTCTCTACTGAAGAGGAGCCCACTGATGACTTCAATCAGAACAGAAAGAAGAAAAACCGAGTGGAATGA 3174 0.3781 MSSSSFFPQTAVISGYQQARRRTDTRIHDVFLSFRGKDTRASFTSHLYASLQNAGINVFRDDDSLKRGHCISKSIKRAIEESEISIIIFSKNYAKSRWCLNELLTIMECRRSIGQVVLPVFYDVDPSEVRHQTGEFGNSFEYRWNNPNINLSKTVREKKLLVKWRKALLKAASLAGFVVLNFRNESEVIKDIVNNVTHLLDKTDLFIANNPVGVESRVQDMIQLLDQDIQQSNDVLLLGMWGMGGVGKTTIAKAIYNKIGHNFDGRSFLANIREVWEQNVGRVNLQEKLLFDICKEMTIKIQSVENGKNILKDRLCHKRVLIVLDDVNTLDQLDALCGSCKWFGSGSRIIITTRDRHILCGDRANHVYEMKHMDESESIELFSWHAFKQVSPTKDFIEFSRNVVEYSGGLPLALEVLGSYLFDREVREWKSTLDKLKRIPNNQVQKKLRISYDGLNDDIEKEIFLDVACFFIGMDRNDVTLILDGCGLFAEIGISILVERSLITVDDKNKLGMHDLLRDMGREIIREKSPEELEERCRLWFHDDVLHVLSEHTGTKAIKGLALKLPRSNEKCFSTKAFKKMKRLRLLQLSGVKLDGDFEYLSRNLKLLSWNGFSLTHIPNNFHRENLVSIELQNSNVSLLWKEDQRLEKLKILNLSHSHCLTHTPDFSYLPNLEKLVLKDCPMLSEVCPTIGDLTEILLIDLEDCVSLRSLPRSIYKLKSLKILILSGCLMIDKLEDDLEQMESLTTLLANNTAITTVPFSVVRSKSIGYISLCGYEGLSHDVFPSIIWSWMSPTNNLPPLFQTSNIMSSLVPLDVPHSSSHELSSISMYLPNLRSLWVECSSERQLSHDAAIILDALHTINRKELEPTATTSQVSKHSLKSLLIQIGMNCQATNILKDIILQNIDVNSSGGCLLPGDSYPNWLTFLSEGSSVTLEVPQVEGRNLKTMMCIVYTSTPDNITSSGLKNVLVKNYTKATIQLYKSEALVSFEDEEALRVVSSIEPGNKVEVVVVFENSFIVKKTAVYLVYDEPSVKRFSTEEEPTDDFNQNRKKKNRVE* 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0422 1057 ProSiteProfiles TIR domain profile. 26 200 IPR000157 GO:0007165
Mtr6g0422 1057 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 34 1028 - -
Mtr6g0422 1057 Gene3D - 372 456 IPR042197 -
Mtr6g0422 1057 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 1028 IPR044974 GO:0006952
Mtr6g0422 1057 Pfam NB-ARC domain 218 452 IPR002182 GO:0043531
Mtr6g0422 1057 Gene3D Ribonuclease Inhibitor 550 908 IPR032675 -
Mtr6g0422 1057 Gene3D - 26 197 IPR035897 -
Mtr6g0422 1057 SUPERFAMILY L domain-like 562 897 - -
Mtr6g0422 1057 MobiDBLite consensus disorder prediction 1037 1057 - -
Mtr6g0422 1057 SMART till_3 27 174 IPR000157 GO:0007165
Mtr6g0422 1057 Coils Coil 732 752 - -
Mtr6g0422 1057 PRINTS Disease resistance protein signature 237 252 - -
Mtr6g0422 1057 PRINTS Disease resistance protein signature 314 328 - -
Mtr6g0422 1057 PRINTS Disease resistance protein signature 407 421 - -
Mtr6g0422 1057 PRINTS Disease resistance protein signature 645 661 - -
Mtr6g0422 1057 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 466 IPR027417 -
Mtr6g0422 1057 SUPERFAMILY Toll/Interleukin receptor TIR domain 22 176 IPR035897 -
Mtr6g0422 1057 Pfam TIR domain 28 198 IPR000157 GO:0007165
Mtr6g0422 1057 SUPERFAMILY "Winged helix" DNA-binding domain 443 549 IPR036390 -
Mtr6g0422 1057 Gene3D - 198 365 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0422 Mtr-Chr6 5063093 5071119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0422 21 762 WRKY Transcription Factor Family AT4G12020 31.275 1.96e-89 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0422 - - mtr:MTR_6g015695 1592.02