Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0421 ATGAACAAGCTAATAGCGAAGCTGTTCAAACGAGGAGCAAAGGAGAAACCAGCCTCTTTCGTTTTGAAAGTTGTTATGCACTGTGATGGATGCGCCAAAAAGATAGAACGAATGGTTCTTAAATTCGACGGTGTAGAGAGCGTTGAATCTGACTGCTCTAGTAATACATTGAAGGTTATTGGAAAAGCGGACCCCGACAAGGTGCGAGATAAACTAGAGCAAAAATCTAAGAGGAAGGTTGTGCTTTCCATGGAAAATAAACTTTATGAAGTGTTCTTAAGTTTTAGAGGAAAAGATACTCGTGCATCATTCACTTCACATCTCTATGCTTCACTTCAAAATGCTGGAATTAATGTTTTTAGGGATGATGATTCGCTTCAAAGAGGAGATCAAATATCATCATTACTTCAATTGATTGAAGAGTCTCGAATTTCTGTGATTGTTTTTTCAAGAAATTATGCAGATTCGCGATGGTGTCTAGATGAGTTAGTAAAGATAATGGAGTGTCAGCGAACCATAGGGCAGATAGTTGTGCCAGTGTTCTACGATGTAGATCCCTCTGAAGTACGTCACCAGAAAGGCGAGTTTGGTAAAGCATTTCAAAATCTCTTAAATAGAATTTCAAAGGATGAAGATGAGTCCCTTTCAGAGGAAGAGAAAGATGAGTTGCTGCATTGTAAGTTGAGCTGGATAGAGGCGCTTCGAGGGGCGACTAACATTGCAGGATTTGTAGTCCTAGATTCCAAGAATGAAAATAAGGCCATCAAGGATATTGTTGAAAAAATTACTCATTTGCTTGATAAGACAGATTTGTTCATTGCTGATAAACCTGTGGGAGTTGGTTCTCGAGTGCAAGATGTTATTGAACTGTTAGACATCCAACAATCAAATGATGTACTGCTACTTGGGATGTGGGGTATGGGGGGGATTGGTAAAACAACCATTGCAAAAGCTATCTATAATGAAATTGGCCGTAATTTTGAAGGTAGGAGCTTCCTTGCAAATGTTAGGGAAGTTTGGGATGAGAATGCTGGAAAAGTGAATTTACAAGAACAACTTCTCTTTGACATCTGTAAAGATATGACAATCAAAATACAAAGCATTGAAAGTGGAAAAATCATATTAAAGGATAGACTCTGCCGTAAAAGAGTACTAATTTTACTTGATGATGTTAATACATTGGACCAACTAAATGCTTTGTGCGGAAGTCATAAATGGTTTGGTCCGGGGAGTAGAATAATCATTACCACAAGGGATAAACATATACTTAGTGGGAATAGGGTTAATAAAGTATTTAAAATGAAACACATGGTTGAAAGTGAATCAATTGAGCTATTTAGTTGGCATGCATTCAAGCAAGCGAGTCCTACAAACGATTTTGTTGAAATTTCTAGAAATGTAGTTGAGTATTCTGGGGGGTTGCCACTAGCATTGGAAGTCCTTGGGTCATATTTATTCGATAGGGAGGTAACAGAATGGAAAAGTGCATTGGACAAACTCAAAAGAATTCCTAATAATCAATTACAGAAGAAGTTAAGAATAAGCTATGATGCTTTAAATGATGACATTGAGAAAGAAATATTCCTTGATGTAGCTTGTTTCTTTATTGGGATGGACCGAAATGACGTTACACTTATATTAAATGGATGTGGACTTTTTGCTGAAATTGGAATAAGTATCCTTGTTGAGCGTAGTCTTGTAACTGTTGATGATAAGAACAAACTTGGAATGCATGATTTGTTGCGAGATATGGGAAGAGAAATCATTCGTGAGAAATCACCAGAGGAGCTCGAGGAGCGTTGCAGGTTGTGGTTTCATGATGATGTGCTTCATGTATTATCAGAACAAACTGGAACAAAAGCTATTAAGGGGCTGACTTTGAAGTTCCCAAGAGCCAATGAAAAATGTTTTAGTACTAAAGCATTCAAGAAGATGACGAGACTCAGATTGCTTCAACTTGCTGGGGTTAAACTTGATGGAGATTTTGAATATCTTTCGAGAAATCTGAGATGGCTGTCTTGGAATGGATTTTCTTTAACACATATACCTACAAACTTTTACAAAGGAAGCTTGGTTTCCATCGAGTTAGAGAATAGCAATGTCAAACTTTTATGGAAAGAGGCCCAGAGGATGGAAAAACTGAAAATTCTAAATCTTAGTCATTCTCATTGTCTGACACACACCCCAGACTTTTCATACATGCCTAATCTTGAGAAGCTGGTACTTAAAGATTGTCCAATGTTGTCTGAGGTTTCTCCTAGCATTGGAAATCTCAGTGAAATTCTTCTAATAGATTTGGAAGATTGTGTTAGCCTTCGTAGCCTTCCAGGAAGCATCTATAAGTTGAAATCTCTGAAAACTCTCATTCTTTCTGGGTGTATAATGATTGACGAGTTGGAAGAGGACATAGAACAAATGGAATCATTAACCATTCTGCTTGCAAATAACACTGGAATAAAAAGAGTACCCTTTTCAGTAGTAAGGTCAAAAAGCATTGGATACATTTCTCTATGTGGCCATGAAGGATTTTCACGTGATGTGTTTCCGTCTATCATCTGGTCTTGGTTGTCACCAACAAATAATCTCTCATCCCTAGTTCAAACATCTAATGTCATGTCATCCCTTGTTTCTGTAGATGTACCAAATAGTAGTTCCCATGAACTATTATCGATTTCCAAGTACCTTCCAAGTCTTCGAAGTCTTTGGGTGGAGTGCAGCTCAGAACTTCAACTTTCTCATGATGCTGCAATAATTTTGGATGCCTTATATGCCACAGATTATAAGGGGTTTGAATCAATTGCAATTACATCACAGGTATCAAATATGACTACTTCTACATCACAAGTATCAGAACATTCCTTCAAGTCTCTTTTAATTCAAATGGGAACGAATTGCCAAGTCACCAATATTTTGAAAGAGAAAATTGTACAGAATATGGATCTCAATGGGAGCGGTGATTGTTTGCTTCCCACTGATGGTTATCCAGATTGGTTAACCTTTCATTCTGAAGGTTCTTCGGTAACTTTTCAAGTTCCCCAAGTGGAAGGCCGTAGCTTGAAAACAATGATGTGCATTGTCTATACTTCAACCCCAGCTAACATGATATCAAGTGGCCTTAAAAACATGTTAGTGAAAAACCACACAAAGGCCACCATTCAGCTCTATAAGAGTGAGGCATTGGTCTCCTTTGAAGATGAGGAGAGCCAGAGGGTAATATCAAGTATAGAACCTGGTAACAAAGTGGAGGTCATTGTTGTTTTCGAGAACAGTTTCATTGTGAAAAAGACAGCAGTTTATCTGGTATATGATGAACAAATTGGTGAAAAAGTGGAGCTATATGATGTACCAGAAAGAAAGAAAATTGAGTGGAATGAATCAAAGAAAGATGGTGCCTGCAAACCTTTTTATTGCTAA 3414 0.377 MNKLIAKLFKRGAKEKPASFVLKVVMHCDGCAKKIERMVLKFDGVESVESDCSSNTLKVIGKADPDKVRDKLEQKSKRKVVLSMENKLYEVFLSFRGKDTRASFTSHLYASLQNAGINVFRDDDSLQRGDQISSLLQLIEESRISVIVFSRNYADSRWCLDELVKIMECQRTIGQIVVPVFYDVDPSEVRHQKGEFGKAFQNLLNRISKDEDESLSEEEKDELLHCKLSWIEALRGATNIAGFVVLDSKNENKAIKDIVEKITHLLDKTDLFIADKPVGVGSRVQDVIELLDIQQSNDVLLLGMWGMGGIGKTTIAKAIYNEIGRNFEGRSFLANVREVWDENAGKVNLQEQLLFDICKDMTIKIQSIESGKIILKDRLCRKRVLILLDDVNTLDQLNALCGSHKWFGPGSRIIITTRDKHILSGNRVNKVFKMKHMVESESIELFSWHAFKQASPTNDFVEISRNVVEYSGGLPLALEVLGSYLFDREVTEWKSALDKLKRIPNNQLQKKLRISYDALNDDIEKEIFLDVACFFIGMDRNDVTLILNGCGLFAEIGISILVERSLVTVDDKNKLGMHDLLRDMGREIIREKSPEELEERCRLWFHDDVLHVLSEQTGTKAIKGLTLKFPRANEKCFSTKAFKKMTRLRLLQLAGVKLDGDFEYLSRNLRWLSWNGFSLTHIPTNFYKGSLVSIELENSNVKLLWKEAQRMEKLKILNLSHSHCLTHTPDFSYMPNLEKLVLKDCPMLSEVSPSIGNLSEILLIDLEDCVSLRSLPGSIYKLKSLKTLILSGCIMIDELEEDIEQMESLTILLANNTGIKRVPFSVVRSKSIGYISLCGHEGFSRDVFPSIIWSWLSPTNNLSSLVQTSNVMSSLVSVDVPNSSSHELLSISKYLPSLRSLWVECSSELQLSHDAAIILDALYATDYKGFESIAITSQVSNMTTSTSQVSEHSFKSLLIQMGTNCQVTNILKEKIVQNMDLNGSGDCLLPTDGYPDWLTFHSEGSSVTFQVPQVEGRSLKTMMCIVYTSTPANMISSGLKNMLVKNHTKATIQLYKSEALVSFEDEESQRVISSIEPGNKVEVIVVFENSFIVKKTAVYLVYDEQIGEKVELYDVPERKKIEWNESKKDGACKPFYC* 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0421 1137 Pfam Heavy-metal-associated domain 23 76 IPR006121 GO:0046872
Mtr6g0421 1137 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 94 1102 - -
Mtr6g0421 1137 SUPERFAMILY "Winged helix" DNA-binding domain 508 613 IPR036390 -
Mtr6g0421 1137 SMART till_3 88 240 IPR000157 GO:0007165
Mtr6g0421 1137 Pfam TIR domain 89 262 IPR000157 GO:0007165
Mtr6g0421 1137 ProSiteProfiles TIR domain profile. 87 262 IPR000157 GO:0007165
Mtr6g0421 1137 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 94 1102 IPR044974 GO:0006952
Mtr6g0421 1137 Coils Coil 796 816 - -
Mtr6g0421 1137 PRINTS Disease resistance protein signature 301 316 - -
Mtr6g0421 1137 PRINTS Disease resistance protein signature 378 392 - -
Mtr6g0421 1137 PRINTS Disease resistance protein signature 471 485 - -
Mtr6g0421 1137 PRINTS Disease resistance protein signature 709 725 - -
Mtr6g0421 1137 Gene3D - 15 82 - -
Mtr6g0421 1137 Gene3D - 83 265 IPR035897 -
Mtr6g0421 1137 CDD HMA 21 74 IPR006121 GO:0046872
Mtr6g0421 1137 Gene3D Ribonuclease Inhibitor 624 951 IPR032675 -
Mtr6g0421 1137 SUPERFAMILY L domain-like 627 912 - -
Mtr6g0421 1137 SUPERFAMILY HMA, heavy metal-associated domain 23 77 IPR036163 GO:0046872
Mtr6g0421 1137 Pfam NB-ARC domain 284 517 IPR002182 GO:0043531
Mtr6g0421 1137 SUPERFAMILY Toll/Interleukin receptor TIR domain 85 211 IPR035897 -
Mtr6g0421 1137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 266 530 IPR027417 -
Mtr6g0421 1137 Gene3D - 266 431 IPR027417 -
Mtr6g0421 1137 CDD AAA 278 419 - -
Mtr6g0421 1137 ProSiteProfiles Heavy-metal-associated domain profile. 26 81 IPR006121 GO:0046872
Mtr6g0421 1137 Gene3D - 437 520 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0421 Mtr-Chr6 5050717 5061485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0421 86 901 WRKY Transcription Factor Family AT4G12020 30.289 1.97e-83 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0421 - - mtr:MTR_6g015695 1649.41