Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0419 ATGCATCCATATATGTCTTCCTACAGTGAAGCGAGATCTAAATGGAGAAAAGTTAGTATAGTAACAAGAGCAGTGTTTAACTTCAAATCTCTCCTTTATGGTAGAAATGAATCAAGGATCCATGATGTGTTCTTAAGTTTCAGAGGAGAGGACACTCGCTCTTCATTCACTTCACATCTCTATGCTTCTCTTCGAAACTCTGGAATCAAAGTTTTTAGGGAAGACGATTCTCTTCAAAGAGGAGATCACATTTCAACATCACTCCTACGAGCAATTGAACAGTCTCGAATGTCTATCATCATTTTCTCGACAAATTATGCGGAATCACGATGGTGTCTTGATGAGTTGGTGAAGATAATGGAATGTAATAGAACCATTGGACAAATTGTTCTGCCAGTGTTCTTAGACGTAGATCCATCGGAAGTCCGTCATCAAACCTCTGAATTCGGAAAAGCATTTCAAATTCTTTTGAATAGGAGGATTGAGAAGGAAGAACCTGAGTTGATAGAATTCAACTTGGAGATGAAGTGGAGAACAGCGCTTCGCCAGGCAGCTGGCCTTGCTGGGTTCGTAGTCCTAAACTTAAGGAATGAAAGTGATGTTATAGAGGATATTGTTGAAAATGTTACGCGTAAGCTTGACAAGGCAGACTTGTTTATTGCTAATAATCCAGTGGGAGTTGAATCTCGAGTGCAGGATATGATTCAACTGCTGGACCAAGATATCCAACTATCAAATGATGTTCTCCTTCTAGGGATGTGGGGTATGGGAGGAGTTGGTAAAACGACCATTGCCAAAGCTATTTACAATAAAATTGGCCGCAATTTTGAAGGTAGAAGCTTCCTTGCAAATATTAGGGAAGTTTGGGATGAGACTGCTGGAAAATTGAATTTACAAGAACAACTTCTGTTTGACATCTGCAAAGTTACAGCGAAAGTACCAAGCATTGAAAGTGGAAAAACCATATTAAAGGATAGACTCAGCCAGAAAAGAGTACTAATTTTACTCGATGACGTTACTACATTGGACCAACTAAATGCTTTGTGTGGAAGTCGTAAGTGGTTTGGTTCGGGAAGTAGAATAATCATCACCACAAGGGATAGACATATACTTCGTGGGAATAGAGTTAATAAAGTATTCAAAATGAAACACATGGATGAAAGTGAATCAATTAAGCTATTTAGTTGGCACGCATTCAAGCAAGCGGGTCCTACAAAAGATTTTGCTGCAATTTCCAGAAAGGTCGTTGAGTATTCTGGGGGATTGCCACTAGCTTTGGAAGTCCTTGGGTCATATTTGTTTGATAGAGAGGTAACAGAATGGAAAAGTGTATTGGACAAACTCAAAAGAATTCCTAATAATCAAGTACAGGAGAAGTTAAGAATAAGCTATGATGCTTTAAATGATGATACTGAGAAAGAAATATTCCTTGACATAGCTTGTTTCTTTATTGGGATGGACCGAAATGATGTTACACTTATATTAAATGGATGCGGACTTTTTGCTGAAATTGGAATAAGTATCCTTGTTGAGCGAAGTCTGGTTATTGTTGATAAAAAGAACAAACTTGGAATGCATGATTTGTTGCGAGATATGGGAAGAGAAATCGTTCGTGGGAAATCACCAGAAGAGCTCGAGGAGCGTTGCAGGTTGTGGTTTCAGGAGGATGCGCTTCAAGTATTATCAGAACAAACTGGAACTAAAACTATTAAGGGGCTGGCTTTGAAGTTGCCAAGATCTAATGAAAAATGTTTTAGTACTAAAGCATTCAAGAAGATGAAGAGACTCAGATTGCTTCAACTTGCTGGGGTAAACCTTGATGGAGATTTTGAATATCTTTCGAGAAATCTGATATGGCTGTCTTGGAATGGATGTTGTTTACCACATATACCTGAAAACTTTTATAGAGAAAATTTAGTTTCCATCGAGTTAGAGAATAGCAATGTCAAACTTTTATGGAAAGTGGCCCAGAGGATGGAAAAGCTGAAAATTCTAAATCTTAGCCATTCTCATTGTCTGATGCACACCCCTGACTTTTCATATATGCCTAATCTTGAAAAGCTAGTACTCAAAGATTGTCCAATATTGTCCGAGGTTTCTCCTACAATAGGAAAACTCAGTGAAATTCTTCTAATAGATTTGGAAGATTGTGTTAGCCTTCGTAACCTTCCAAGAAGCATCTATAAGTTGAAATCTCTTAAAACTCTCATTCTTTCTGGGTGTATAATGATTGACAAGTTAGAAGAGGACATAGAACAAATGGAATCTTTAACCACTCTGCTTGCACATAAAACTGCAATAAAAAGAATACCCTTTTCAGTAGTAAGGTCAAAAAGCATTGGATACATCTCTTTGTGCGGCTATGAAGGATTCTCGCGTGATGTGTTTCCATCTATCATTTTGTCTTGGATGTCACCAACAAATAATCTCCCATCCCTATTTCAAACATCTACTATCATGCCATCTCTTGTTCCTTTAGATGTACCACATAGTAGCTCCCATGAACTATCATCAATTTCCAAGTACCTTCCAAGTCTTCGAAGTCTTTGGGTGGAGTGCAGTTCAGAACATCAACTTTCTAATGATGCAACAATAATATTGGATGCTTTATACGCTACTCTTTCTAAGGATGTGGAATCGACTTCAGCTACTTCACAAATATCAAATATGATAACTTCTGCATTAACTCAACATTGCGATCAATTGCATGTTCCCTGTTCAGAACTTTCCATGAAGTCTGTTCTAATACAAATGGGTATGAATTGCCAAGTCACCAATAATCTGAAAGAAAACATGTTACAGAAGATGGATGGGAATGGTTTTGGGGAAGATTCTTCTGTAACTTACAATTGCGAAGGTTCTTCTGTAACTTTTGAAGTCCCTCAAATGAAAGGGCGTATGTTGAAGACAATAATGATATGCATTGTCTATTCTTCAACCCCGGATAACATAGCATCTGATGGCCTCACAAATTTGTTGGTAAAAAATTACACAAAATCCACCATTCAGCTCTATAAGAGAGAGGCGTTAATCTCCTTTGAAGATGAGGAGGGGCAGAGAGTAGTATCAAGTATTGAACCTGGAAATAAAGTGGATTTTGTTGTTGTTTTTGAGAACGGTTTCGTTGTGAAGAGGACAACAGTTTATCTCATATATGATGAACCAATTGCTGAAAAGGGGGAGGAGTGTCATGCACAAGATAAGAATGTTATTGTTAGTAGCGGTGATGAAAATGAATGCTTTCTAGGCGAGATCTCTTCTCATGCACAACATAAGAACGAATCAATTGTTTGTAGTGGTGAAGAAAATGAATGCTTTGTCAGAAAAGTCTCTCCTCAAGTGGTTCCTGTGGATGACTTAACACAACAGAAGAAGAAAAATCTCCAAAGGAAATGGAAGACAATAAAACAATGCTAG 3417 0.379 MHPYMSSYSEARSKWRKVSIVTRAVFNFKSLLYGRNESRIHDVFLSFRGEDTRSSFTSHLYASLRNSGIKVFREDDSLQRGDHISTSLLRAIEQSRMSIIIFSTNYAESRWCLDELVKIMECNRTIGQIVLPVFLDVDPSEVRHQTSEFGKAFQILLNRRIEKEEPELIEFNLEMKWRTALRQAAGLAGFVVLNLRNESDVIEDIVENVTRKLDKADLFIANNPVGVESRVQDMIQLLDQDIQLSNDVLLLGMWGMGGVGKTTIAKAIYNKIGRNFEGRSFLANIREVWDETAGKLNLQEQLLFDICKVTAKVPSIESGKTILKDRLSQKRVLILLDDVTTLDQLNALCGSRKWFGSGSRIIITTRDRHILRGNRVNKVFKMKHMDESESIKLFSWHAFKQAGPTKDFAAISRKVVEYSGGLPLALEVLGSYLFDREVTEWKSVLDKLKRIPNNQVQEKLRISYDALNDDTEKEIFLDIACFFIGMDRNDVTLILNGCGLFAEIGISILVERSLVIVDKKNKLGMHDLLRDMGREIVRGKSPEELEERCRLWFQEDALQVLSEQTGTKTIKGLALKLPRSNEKCFSTKAFKKMKRLRLLQLAGVNLDGDFEYLSRNLIWLSWNGCCLPHIPENFYRENLVSIELENSNVKLLWKVAQRMEKLKILNLSHSHCLMHTPDFSYMPNLEKLVLKDCPILSEVSPTIGKLSEILLIDLEDCVSLRNLPRSIYKLKSLKTLILSGCIMIDKLEEDIEQMESLTTLLAHKTAIKRIPFSVVRSKSIGYISLCGYEGFSRDVFPSIILSWMSPTNNLPSLFQTSTIMPSLVPLDVPHSSSHELSSISKYLPSLRSLWVECSSEHQLSNDATIILDALYATLSKDVESTSATSQISNMITSALTQHCDQLHVPCSELSMKSVLIQMGMNCQVTNNLKENMLQKMDGNGFGEDSSVTYNCEGSSVTFEVPQMKGRMLKTIMICIVYSSTPDNIASDGLTNLLVKNYTKSTIQLYKREALISFEDEEGQRVVSSIEPGNKVDFVVVFENGFVVKRTTVYLIYDEPIAEKGEECHAQDKNVIVSSGDENECFLGEISSHAQHKNESIVCSGEENECFVRKVSPQVVPVDDLTQQKKKNLQRKWKTIKQC* 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0419 1138 Gene3D - 211 379 IPR027417 -
Mtr6g0419 1138 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 47 1051 - -
Mtr6g0419 1138 SMART AAA_5 247 386 IPR003593 -
Mtr6g0419 1138 Coils Coil 744 764 - -
Mtr6g0419 1138 SUPERFAMILY "Winged helix" DNA-binding domain 455 561 IPR036390 -
Mtr6g0419 1138 SUPERFAMILY Toll/Interleukin receptor TIR domain 37 189 IPR035897 -
Mtr6g0419 1138 SMART till_3 40 187 IPR000157 GO:0007165
Mtr6g0419 1138 Gene3D - 384 468 IPR042197 -
Mtr6g0419 1138 SUPERFAMILY L domain-like 574 859 - -
Mtr6g0419 1138 Pfam NB-ARC domain 231 464 IPR002182 GO:0043531
Mtr6g0419 1138 Gene3D - 39 210 IPR035897 -
Mtr6g0419 1138 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 479 IPR027417 -
Mtr6g0419 1138 ProSiteProfiles TIR domain profile. 39 213 IPR000157 GO:0007165
Mtr6g0419 1138 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 1051 IPR044974 GO:0006952
Mtr6g0419 1138 Gene3D Ribonuclease Inhibitor 555 935 IPR032675 -
Mtr6g0419 1138 Pfam TIR domain 41 216 IPR000157 GO:0007165
Mtr6g0419 1138 PRINTS Disease resistance protein signature 250 265 - -
Mtr6g0419 1138 PRINTS Disease resistance protein signature 326 340 - -
Mtr6g0419 1138 PRINTS Disease resistance protein signature 419 433 - -
Mtr6g0419 1138 PRINTS Disease resistance protein signature 657 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0419 Mtr-Chr6 5027487 5033605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0419 38 774 WRKY Transcription Factor Family AT4G12020 30.820 2.99e-83 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0419 - - mtr:MTR_6g015695 1616.28