Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0416 ATGTCTAAAAAGGCTTTGACATCAATGAAAGATGAAAATCAAGAATTGCAGAAGCAAATTGGATGCATTAGTGGATTTTTTCAGCTATTTGATCGTCATAGGTTTCTCACAGGCCACAACAACAGTCACAATATGGCAAACCAAGGGGGAACAGGAAATAACATCAAAGAGTTGAATAATGCAATACAAAAGACAAAGGCAAAGAATGTGAAGGTTCCAAGAGAGAATCAACAATCCTCCACAGAATCATCATCAGGAACTTCCATGTCTTCGTCGTCTTGTTCATCTAGCATGTCATCCATCGAGTTTAACAGAACAATACATATAGAACCACCATCGATAAGTCCAATGAAAACCACAGAAAATTCCAATTCAGAAGCAGCAGCGAAGCAACATGACAACCAAAGAAATCAATCACCTAATTTCCATGATATTGTCAAAGACTCGATGCATAAAGACGCACAAAGATTATCGGTAAAAACTCTGGCTAAAGAGGAAAAGAAGGGTCGAATCTTGAAACACATCGACTCTCCGCGGCCTATGGTTCCTTGGGACTCACCAAGACTCTCCTATGATGGGAGAGATATACAAAGTGTATCCAAATTTGCCACAAAGCAGAAGGAACTCCCGAGGTTTTCCTTGGACAGCAAGGAAAGATCCATCAAAAGTTTCAATGAAGGAACAAAAACTCGAAACCTTTTGAAGGGTCCACAGAACGTGCGTGGAGGCTCCAACACAATGGTAAAGCAGATGGAAGAACCAGAAAGTGCTAAAAGACCATCAAGTGTTGTGGCAAAGTTGATGGGACTAGAAGCATTCCCTGACTGGAGCGAAACTTCTGATAGCTGCAACACTAACAAAGACGACACATTTGCAGGATCTAGAATGAGCTATGAATACATGCAACAGCAGGATTCATCATTCCAAAAGACAAGCAAAGGGACAAACATGCTTCAATCTAGGAGGGATGGTTCAATCACAAATGAGACACCATATTCACAATTTTCCAAGAATAACGAACCTTCAACAAAGGCCTCAAATCGGTCCCTCTCGGTCTATGGTGAAATTGAAAAAAGGATGGCGGATCTAGAGTTCAAAAAATCCGGAAAGGATCTTAGAGCCCTTAAACAGATTCTTGAAGCAATGCACAGATACAAAGAATCATTAGATACTGCAAGTGATCAGACTTCAAATTCTCCGTATGACAATACGAGTAATAGTAGTGTCGGTGAAAGCTTGAATGTACAAAGTCCAAGAACACGGCAGAAGAACCCGACATCTGTCACAGCTGAGAGGTTGAGTTCAACTCAGGGTAGTAAATCTCCAATTGTCATCATGAAACCAACAAAGGTTGCAAGAAAAACAAATAATTCTTCTTCACCAGAAATGCCAATTCATGGTAAATCATCAGGTAACAAGGTTTACCGCAGTGATCCTACTGATGGAATGTCAGTTGTCAAGCTTGGCAGGCAAGCAACAAAAGGCAGTCCAGCAATCAAACATGTCAAAGATCCTATTAGTCCTCCCTTTCATTCAGTGGATAGAAGTAATAGGATGAGAACTTCAAAATTGATGCAATCCTCAAAAGTTCCTCGAGTCATCAATGGAGAAAACAACACCAACTCCGGCGTTATGGCAGAGACTAGGAGTCCAAGACTACAAAAGAAGTTCGGTTTGGAGAGACGTTCCCCACCAACCAGCCCAAAATCAGATATCAGCAGTAACAGAAGACAACAAAATAGGCAATCAACGGATCTGTCTTTGCCGAGCAAAACATCCAGACAAAAATTGTCTCCTTTGAAGGAAAGAAATGATCAGAATGCAGAACAAGACTTGAGCAAGGAAAGTTTTATGGTTGAAACAATGGTTACTGCAGAACAACCCAGTCCCGTGTCTGTTCTTGATGCTTCATTCTATAGAGAAGACCCACCTTCCCCGGTTAAAAGGAAATCAGACATATCAAAAGATTTAGATGAAGTACTGAACACTTACGATAATAGTGAGGAGGACTCAGAAGGTCTTTCTCTTTCATCCAACACTAACACAAAAGTCAACTTTGGCAATGGAACCATTGATATTGACTTGATCACTGATAATTTGGTTCAAATTCTTCAACAATTTGACCACAATGATGATGAAAGCTTCGCAAACTTCAGTGACCACAACGATCCTGACCACAAATATATATCAGAAATATTACTAGCATCAGGACTGCTCACCAGTCCCAGCTCTAGCCAGGCATTGCATTCATCTGGTTACCCGATAAACCCAATATTGTTCCTTGCACTAGAGAAACTAAAGACAAACAAGATGCATTCCTACATTGCAAAGACGAACAATCATGAGAAAATGGAAAGAAAGCTCATATTTGATGTTGTTAATGAAATTCTATTTCAAAAGCTAATATTGGAGAGTTCATACAAGCCATATCAGCCAGAAGGAAGAAAACCAGACGGACAACAGCTTTCAGATATGCTTTGCACAGAAATCGACAAGTTACAGCATAAAAATAGGAATGTCAACCTGGCTAATGAGGATGAGTATTTGACAAGTATCTTGTTGGAAGATTTGGTGCAGCACCCCACAAGTACAGAATGCTACAATGAGATACCAAATGTTGTGTTGGATATTGAAAGATTGATCTTCAAAGATTTGATAACTGAAGTTGTGAGAAGTGAAGTAGCTAACCATTCTGGTTAG 2700 0.4004 MSKKALTSMKDENQELQKQIGCISGFFQLFDRHRFLTGHNNSHNMANQGGTGNNIKELNNAIQKTKAKNVKVPRENQQSSTESSSGTSMSSSSCSSSMSSIEFNRTIHIEPPSISPMKTTENSNSEAAAKQHDNQRNQSPNFHDIVKDSMHKDAQRLSVKTLAKEEKKGRILKHIDSPRPMVPWDSPRLSYDGRDIQSVSKFATKQKELPRFSLDSKERSIKSFNEGTKTRNLLKGPQNVRGGSNTMVKQMEEPESAKRPSSVVAKLMGLEAFPDWSETSDSCNTNKDDTFAGSRMSYEYMQQQDSSFQKTSKGTNMLQSRRDGSITNETPYSQFSKNNEPSTKASNRSLSVYGEIEKRMADLEFKKSGKDLRALKQILEAMHRYKESLDTASDQTSNSPYDNTSNSSVGESLNVQSPRTRQKNPTSVTAERLSSTQGSKSPIVIMKPTKVARKTNNSSSPEMPIHGKSSGNKVYRSDPTDGMSVVKLGRQATKGSPAIKHVKDPISPPFHSVDRSNRMRTSKLMQSSKVPRVINGENNTNSGVMAETRSPRLQKKFGLERRSPPTSPKSDISSNRRQQNRQSTDLSLPSKTSRQKLSPLKERNDQNAEQDLSKESFMVETMVTAEQPSPVSVLDASFYREDPPSPVKRKSDISKDLDEVLNTYDNSEEDSEGLSLSSNTNTKVNFGNGTIDIDLITDNLVQILQQFDHNDDESFANFSDHNDPDHKYISEILLASGLLTSPSSSQALHSSGYPINPILFLALEKLKTNKMHSYIAKTNNHEKMERKLIFDVVNEILFQKLILESSYKPYQPEGRKPDGQQLSDMLCTEIDKLQHKNRNVNLANEDEYLTSILLEDLVQHPTSTECYNEIPNVVLDIERLIFKDLITEVVRSEVANHSG* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0416 899 MobiDBLite consensus disorder prediction 302 348 - -
Mtr6g0416 899 MobiDBLite consensus disorder prediction 389 439 - -
Mtr6g0416 899 Coils Coil 375 395 - -
Mtr6g0416 899 MobiDBLite consensus disorder prediction 519 548 - -
Mtr6g0416 899 MobiDBLite consensus disorder prediction 65 106 - -
Mtr6g0416 899 MobiDBLite consensus disorder prediction 65 143 - -
Mtr6g0416 899 MobiDBLite consensus disorder prediction 596 610 - -
Mtr6g0416 899 PANTHER LONGIFOLIA PROTEIN 599 899 - -
Mtr6g0416 899 PANTHER LONGIFOLIA PROTEIN 1 598 - -
Mtr6g0416 899 PANTHER LONGIFOLIA PROTEIN 1 598 IPR033334 GO:0051513
Mtr6g0416 899 PANTHER LONGIFOLIA PROTEIN 599 899 IPR033334 GO:0051513
Mtr6g0416 899 MobiDBLite consensus disorder prediction 494 612 - -
Mtr6g0416 899 MobiDBLite consensus disorder prediction 113 143 - -
Mtr6g0416 899 MobiDBLite consensus disorder prediction 566 595 - -
Mtr6g0416 899 MobiDBLite consensus disorder prediction 452 478 - -
Mtr6g0416 899 Pfam Domain of unknown function (DUF4378) 725 888 IPR025486 -
Mtr6g0416 899 MobiDBLite consensus disorder prediction 391 439 - -
Mtr6g0416 899 MobiDBLite consensus disorder prediction 452 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0416 Mtr-Chr6 4985504 4990702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0416 141 895 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 30.607 8.87e-65 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0416 - - cam:101511926 1275