Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0408 ATGTTTTCATCTTCAATTTTCATCAAATGGAGTTTCTTTCTTCTCTTCTTATCTTCTTCAAACGACGCCGTTTCGTCATTTTCCGATAAATCAACTCTCCTCCGCTTCAAAGCCTCTCTTTCCGACCCATCCGCCGTTCTCTCCACCTGGAGCTCTACTGCCAACCACTGTTCCTTCTACGGAGTTCTCTGTGATTCCAACTCCCGTGTTGTTGCTCTTAACATCACCGGCAACGGCGGCGTCGAAGATGGTAAACTGATTTCTCATCCTTGCTCTGATTTTTACAAGTTTCCGCTTTATGGGTTTGGAATTAGGAGAAGTTGTGTTGGTTTTAAGGGTTCTTTGTTTGGAAAGTTTCCATCTTTGATCAGTGAGTTAACTGAGCTTAGGGTCTTGAGTTTACCCTTTAATGTGTTGGAGGGTTTTATTCCTAAAGAGATTTGGAATATGGAGAAGCTTGAGGTTCTTGATTTAGAAGGTAATTTGATTAGCGGGTCTATTCCTTTGGGTTTTGAAGGTTTGAGGAAATTGAGGGTTTTGAATTTAGGGTTTAATAAGATTGTTGGAATGGTGCCTAGTGTTTTAGGTGATATTGATAGTTTGGAGGTTCTGAATTTGGCTGCAAATGGTTTGAATGGTTCTGTTCCTGGTTTTGTTGGGAAGTTTAGAGGGGTGTATTTGTCTTTTAATCAGTTCAGTGGTGTTATTCCGGAGGAGATTGGTGAGAATTGTGGGAAGCTTGAGCATTTGGATTTGTCTGGTAATTTGTTGGTTCAAGAGATTCCGAAGAGTTTGGGGAATTGTGGTGGGTTGAAGACGCTTTTGTTGTATTCGAATTTGTTGGAAGAGGATATTCCTGCTGAATTTGGGAAGCTTAAGAGTCTTGAGGTGTTGGATGTTTCGAGGAATACACTTAGTGGTCATATTCCTCGTGAGCTTGGGAATTGTACGGAGCTTTCTGTTGTAGTGCTGTCCAACCTTTTCGATCCGGTTGGGGATGGTGAGTTTGTTACTTTGAATGATGAGTTGAATTATTTTGAAGGTGGAATGCCTGAGGAAGTTGTGTCACTTCCTAAGCTTAGAATTTTGTGGGCTCCCATGGTGAATTTGGAGGGTGGTATTCCTACGAGTTGGGGTGCTTGTGGTAACTTGGAGATGGTCAATTTGGCTCTGAATTTCTTCACCGGAGAGTTCCCAAACCGGCTTGGTTTATGTAAGAAGCTACATTTTCTTGATCTGAGCTCAAACAATCTTACTGGGGAGCTTTCTAAGGAACTTCATGTTCCATGTATGTCTGTGTTTGATGTTAGTGCAAACATGTTGTCCGGTTCAGTTCCTGATTTCTCCGATAATGTTTGTGCTCCCTATCCTTCTCAGAATGGGAATCCATTTGAAGCTGACGATGTCATGTCTCCTTATGCATCATATTTTTCATCGAAAGCTCATGAGAGAACCATTTATGCGTCATTAGGGGGAAATGGTCTTTCGGTTTTTCACAACTTTGGGCAAAATAACTTCAGCGGCATTCAGTCTTTGCCAGTAGTGCGTGACAGGATGGAGGAAAAGAGTAGTTACACACTTCTCGTTGGAGAGAACAAGCTCACGGGACCATTTCCTACATATTTGTTTGAGAAATGTGATGGATTAGATGCATTGCTTTTTAATGTCAGTTATAATCGGCTATCTGGTGAGATTCCTTCTAATATTAGTAGCATGTGCAAATCCCTGAAATTTTTGGATGCATCCAAAAACCAATTTTCTGGACAAATTCCCTCCACGTTAGGGGATTTGGTCTCTCTTGTTTCCCTGAACCTCAGTAGAAACGGGTTACAAGGTCAGATTCCCACCAGCCTTGGACAGATGAAGGTTCTGAAGTTTTTATCTTTGGCTGGTAATAACTTGAGTGGCTCAATTCCTACCAGCCTGGGACAGATGTACTCTTTACAAGTCTTGGACCTGTCTACAAACTCTCTTACCGGTGAGATTCCAAAGTTTATCGAGAACATGAGAAATCTGACCAATGTTTTGCTGAATAACAACAATCTTTCTGGACACATTCCTGCTGGTTTGGTAAATGTCACTACACTCTCTGCATTCAACGTGTCATTCAATAACTTATCTGGATACTTGCCGTCAAATAGTAGCTTGATCAAATGCAGCAGTGCTGTTGGGAATCCATTTTTAAGTTCCTGCCGTGGACTTTCTTTGACTGTACCGTCAGCAAATCAACAAGGGCAGGTTGATGAAAGTTCTATGACATCACAAACTACTGGCAAAGATAGCAATAATGGTTTCAATGCAATTGAGATAGCATCTATTACTTCTGCTTCAGCCATTGTTTCAGTTCTTATAGCCCTTATTGTTCTGTTTTTCATCACACGCAAGTGGAAGCCGAGGTCCAGGGTTGGTGGTTCAGTCAAAAGAGAAGTTACAGTGTTCACTGATATCGGCGTCCCATTGACATTTGAAAATGTTGTCCAAGCCACAGGAAATTTTAATGCAAGCAACTGTATTGGGAGTGGAGGATTTGGAGCAACTTATAAGGCAGAAATATCACAAGGAATCTTGGTGGCAGTGAAACGTCTTTCCGTTGGACGTTTCCAAGGTGTTCAACAATTCCATGCAGAGATTAAGACCCTTGGAAGGCTTCATCATCCTAACCTCGTCACTTTGATCGGTTACCATGCTTGTGAGACAGAGATGTTTCTCATATACAATTATCTTCCGGGTGGTAATCTTGAAAAGTTCATCCAGGAGAGATCCACAAGGGCTGTGGATTGGAAAGTTATTCACAAGATTGCACTGGACATAGCGCGTGCACTTTCCTATCTGCACGATCAATGTGTACCACGTGTACTTCACCGTGATGTCAAGCCTAGCAATATCTTGTTGGACGACGATTGCAATGCTTATCTATCCGACTTTGGACTCGCCAGACTTCTAGGAACTTCAGAGACACATGCCACTACAGGTGTGGCAGGAACGTTCGGCTATGTTGCTCCCGAATATGCGATGACATGTCGTGTTTCTGATAAAGCTGATGTGTATAGCTACGGTGTAGTGCTTCTCGAGTTGCTATCTGATAAGAAAGTGTTGGACCCTTCATTTTCTTCTTATGGGAATGGTTTCAATATAGTTGCATTTGCGTGCATGTTACTAAGGCAAGGAAGGGCAAAGGAGTTTTTCGCCACAGGGTTATGGGATGTAGGACCAGAACATGATTTGGTAGAGGTTCTACATTTAGCTGTTGTATGTACTGTTGATTCACTTTCAACTAGACCTACAATGAAACAGGTTGTGAAAAGGTTAAAGCAACTTCAACCCCCATCATGCTAG 3336 0.4209 MFSSSIFIKWSFFLLFLSSSNDAVSSFSDKSTLLRFKASLSDPSAVLSTWSSTANHCSFYGVLCDSNSRVVALNITGNGGVEDGKLISHPCSDFYKFPLYGFGIRRSCVGFKGSLFGKFPSLISELTELRVLSLPFNVLEGFIPKEIWNMEKLEVLDLEGNLISGSIPLGFEGLRKLRVLNLGFNKIVGMVPSVLGDIDSLEVLNLAANGLNGSVPGFVGKFRGVYLSFNQFSGVIPEEIGENCGKLEHLDLSGNLLVQEIPKSLGNCGGLKTLLLYSNLLEEDIPAEFGKLKSLEVLDVSRNTLSGHIPRELGNCTELSVVVLSNLFDPVGDGEFVTLNDELNYFEGGMPEEVVSLPKLRILWAPMVNLEGGIPTSWGACGNLEMVNLALNFFTGEFPNRLGLCKKLHFLDLSSNNLTGELSKELHVPCMSVFDVSANMLSGSVPDFSDNVCAPYPSQNGNPFEADDVMSPYASYFSSKAHERTIYASLGGNGLSVFHNFGQNNFSGIQSLPVVRDRMEEKSSYTLLVGENKLTGPFPTYLFEKCDGLDALLFNVSYNRLSGEIPSNISSMCKSLKFLDASKNQFSGQIPSTLGDLVSLVSLNLSRNGLQGQIPTSLGQMKVLKFLSLAGNNLSGSIPTSLGQMYSLQVLDLSTNSLTGEIPKFIENMRNLTNVLLNNNNLSGHIPAGLVNVTTLSAFNVSFNNLSGYLPSNSSLIKCSSAVGNPFLSSCRGLSLTVPSANQQGQVDESSMTSQTTGKDSNNGFNAIEIASITSASAIVSVLIALIVLFFITRKWKPRSRVGGSVKREVTVFTDIGVPLTFENVVQATGNFNASNCIGSGGFGATYKAEISQGILVAVKRLSVGRFQGVQQFHAEIKTLGRLHHPNLVTLIGYHACETEMFLIYNYLPGGNLEKFIQERSTRAVDWKVIHKIALDIARALSYLHDQCVPRVLHRDVKPSNILLDDDCNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKVLDPSFSSYGNGFNIVAFACMLLRQGRAKEFFATGLWDVGPEHDLVEVLHLAVVCTVDSLSTRPTMKQVVKRLKQLQPPSC* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0408 1111 Pfam Protein kinase domain 835 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0408 1111 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 11 1110 - -
Mtr6g0408 1111 Gene3D Phosphorylase Kinase; domain 1 795 907 - -
Mtr6g0408 1111 Gene3D Transferase(Phosphotransferase) domain 1 908 1108 - -
Mtr6g0408 1111 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 11 1110 - -
Mtr6g0408 1111 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Mtr6g0408 1111 Pfam Leucine Rich Repeat 246 268 IPR001611 GO:0005515
Mtr6g0408 1111 ProSitePatterns Serine/Threonine protein kinases active-site signature. 952 964 IPR008271 GO:0004672|GO:0006468
Mtr6g0408 1111 ProSitePatterns Protein kinases ATP-binding region signature. 838 860 IPR017441 GO:0005524
Mtr6g0408 1111 ProSiteProfiles Protein kinase domain profile. 832 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0408 1111 SUPERFAMILY L domain-like 116 257 - -
Mtr6g0408 1111 SMART serkin_6 832 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0408 1111 SMART LRR_typ_2 174 197 IPR003591 -
Mtr6g0408 1111 SMART LRR_typ_2 244 268 IPR003591 -
Mtr6g0408 1111 SMART LRR_typ_2 292 316 IPR003591 -
Mtr6g0408 1111 SMART LRR_typ_2 669 693 IPR003591 -
Mtr6g0408 1111 SMART LRR_typ_2 597 621 IPR003591 -
Mtr6g0408 1111 SMART LRR_typ_2 150 173 IPR003591 -
Mtr6g0408 1111 SMART LRR_typ_2 645 668 IPR003591 -
Mtr6g0408 1111 Gene3D Ribonuclease Inhibitor 23 98 IPR032675 -
Mtr6g0408 1111 SUPERFAMILY L domain-like 223 713 - -
Mtr6g0408 1111 CDD STKc_IRAK 838 1106 - -
Mtr6g0408 1111 Gene3D Ribonuclease Inhibitor 476 777 IPR032675 -
Mtr6g0408 1111 Gene3D Ribonuclease Inhibitor 112 328 IPR032675 -
Mtr6g0408 1111 Gene3D Ribonuclease Inhibitor 329 463 IPR032675 -
Mtr6g0408 1111 SUPERFAMILY Protein kinase-like (PK-like) 815 1103 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0408 Mtr-Chr6 4899082 4902527 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0408 28 1111 Receptor kinase-like Gene Family AT3G02130 63.889 0.0 1342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Mtr6g0408 Pkinase 4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0408 - - gmx:100819882 1656.34