Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0404 ATGTTTTCATCTTCAATTCTCATCAAATGGAGTTTCTTTCTTCTCTTCTTATCTTCTTCAAACGACGCCGTTTCATCATTTTCCGATAAATCAACTCTCCTCCGCTTCAAAGCCTCTCTTTCCGACCCATCCGCCGTTCTCTCCACCTGGAGCTCTACTGCCAACCACTGTTCCTTCTATGGAGTTCTCTGTGATTCCAACTCCCGTGTTGTTACTCTTAATATCACCGGCAACGGTGGCGTCCAAGATGGTAAACTGATTTCACATCCTTGCTCTGATTTTTATAAGTTTCCGCTTTATGGGTTTGGAATTAGGAAAAGTTGTGTTGGTTTTAAGGGTTCTTTGTTTGGAAAGTTTCCATCTTTGATCAGTGAGTTTACTGAACTTAGGGTTTTGAGTTTACCCTTTAATGGGTTAGAGGGTTTTATTCCTAAAGAGATTTGGAATATGGAGAAACTTGAGGTTCTTGATTTAGAAGGTAATTTGATTGGTGGGTCTATTCCTTTGAGTTTTCAAGGTTTGAGAAAATTGAGGGTTTTGAATTTAGGGTTTAATAAGATTGTTGGAATTTTGCCTAGTGTTTTAGGTGGTATTGATAGTTTGGAGGTTCTGAATTTGGCTGCAAATGGTTTGAATGGTTCTGTTCCTGGTTTTGTTGGGAAGCTTAGAGGGGTGTATTTGTCTTTTAATCAGTTTAGTGGTGTTATTCCGGTGGAGATTGGTAAGAATTGTGGGAAGCTTGAGCATTTGGATTTGTCTGGTAATTTGTTGGTTCAAGAGATTCCGATTAGTTTGGGGAATTGTGGTGGGTTGAAGACGCTTTTGTTGTATTCGAATTTGTTGGAAGAGGATATTCCTGCTGAATTTGGGAAGCTTAAGAGTCTTGAGGTGTTGGATGTTTCGAGGAATACGCTTAGTGGTCATATTCCTCGCGAGCTTGGGAACTGTACGGAGCTTTCTGTTGTTGTGCTTTCCAACCTTTTCAACCCGGTTGGGGATGTTGAGTTTGTTGCTTTGAATGATGAGTTGAATTACTTTGAAGGTTCGATGCCTGAAGAAGTCGTGACACTTCCAAAGCTTAGGATTTTGTGGGCTCCCATGGTGAATTTGGAGGGAGGTTTTCCTATGAGTTGGGGTGCTTGTAGTAACTTGGAGATGGTTAATTTGGCTCAGAATTTCTTCACTGGAGAATTCCCGAACCAGCTCGGTTTATGTAAGAAGCTGCATTTTCTTGATCTGAGCTCAAACAATCTTACTGGGGAGCTTTCTAAGGAACTACAAGTTCCATGTATGACTGTGTTTGATGTTAGTGTGAATATGTTGTCTGGTTCAGTTCCTGTTTTTTCCAACAACGGCTGCTCTCCATTTCCTTTATGGAATGGGAATCCATTTGAATCTGTCGACGTTACGTCTCCTTATGCATCATATTTTTCATCGAAAGTTCGTGAGAGATTACTTTTCACATCATTAGGGGGAGTTGGCATTTCAGTCTTTCACAACTTCGGGCAAAACAACTTCACCGGCATTCAGTCGTTGCCAATAGCACGAGACAGGATGCAAGAAAAGAGTGGTTACACACTTCTTGTCGGAGAGAACAAACTCACTGGACTATTTCCTACATATTTACTTGAGAAATGTGATGGATTAGATGCATTGCTTTTGAATGTGAGTTATAATAGGTTTTCTGGTGAGTTTCCTTCTAATATTAGTAAAATGTGCAGATCACTGAATTTTTTGGATGCATCTGGAAATCAAATTTCAGGACCCATTCCACCTGCTTTAGGGGATTCGGTCTCTCTAGTTTCCCTGAACCTCAGTAGAAACCTATTACTAGGTCAAATTCCCTCTAGCCTCGGACAGATGAAGGATCTGAAGCTTCTATCTTTGGCTGGTAATAACTTGAGTGGCTCAATTCCTTCCAATCTGGGTCAGTTGTATTCCTTACAAGTCTTGGACCTTTCAACAAACTCTCTTACCGGTGAGATTCCTAAGTTTATTGAGAACATGAGAAATCTGACCATTGTTTTGCTGAATAACAACAACCTTTCTGGACACATTCCAGCTGGTTTAGCTAATGTAACTACACTCTCTGTATTCAACGTGTCTTTCAATAACTTATCTGGATTCTTGCCATCAAATAGTAGCTTGATCAAATGCAGCAGTGCTGTTGGGAATCCATTTCTAAGTTCCTGCCGTGGCGTTTCTCTGACTGTACCATCGGCAAATCAACAAGGACAATTTGATGACAATTCTTCCATGACTGCAGCAGATATTGAAAAAAGTAGCGATAATGGTTTTAGCGCTATTGAGATAGCATCTATAGCTTCTGCTTCAGCCATTGTCTCTGTTCTTATAGCCCTCATTGTTCTGTTCTTTTTCACGCGAAGGTGGAAGCCGAATTCCAGGGTTGGCGGTTCTACCAAAAGAGAAGTTACAGTGTTTACTGATATCGGTGTCCCTTTGACATTTGAAAATGTTGTCCAAGCCACGGGAAATTTCAATGCAAGCAACTGTATTGGGAGTGGAGGATTTGGAGCAACTTATAAGGCAGAGATATCTCAAGGAATCTTGGTGGCAGTGAAACGTCTTTCAGTTGGACGTTTTCAAGGTGTTCAACAGTTCCATGCGGAGATTAAGACCCTTGGAAGGCTTCATCATCCAAACCTTGTAACTCTGATTGGTTACCATGCTTGTGAGACAGAGATGTTTCTCATATATAATTATCTTCCAGGTGGTAATCTTGAAAAGTTCATCCAGGAGAGATCCACAAGGGCCGTGGATTGGAAAGTTCTTCACAAGATTGCGTTGGACATAGCGCGTGCACTTTCCTATCTGCACGATCAATGTGTACCCCGTGTTCTTCATCGCGATGTCAAGCCTAGCAATATCTTGTTGGATGACGATTTGAATGCTTATCTATCCGACTTTGGACTGGCCAGACTTCTAGGAACTTCGGAGACACATGCTACAACCGGTGTCGCAGGAACATTTGGTTATGTTGCTCCCGAATACGCAATGACATGTCGTGTTTCCGATAAAGCTGATGTGTATAGCTACGGTGTGGTGCTTCTTGAGTTGCTCTCAGATAAGAAGGCATTGGACCCTTCGTTTTCTTCTTACGGAAATGGTTTCAATATAGTAGCATGGGGATGCATGCTGCTGAGGGAAGGAAGGGCAAAGGAGTTCTTCGCCGCAGGGTTATGGGATGTAGGACCGGAACATGATTTGGTAGAGGTTCTTCACTTGGCTGTTGTATGTACTGTTGACTCACTATCAACAAGACCTACAATGAAACAGGTTGTGAAAAGACTAAAGCAACTTCAACCTCCACCATGCTAG 3339 0.4178 MFSSSILIKWSFFLLFLSSSNDAVSSFSDKSTLLRFKASLSDPSAVLSTWSSTANHCSFYGVLCDSNSRVVTLNITGNGGVQDGKLISHPCSDFYKFPLYGFGIRKSCVGFKGSLFGKFPSLISEFTELRVLSLPFNGLEGFIPKEIWNMEKLEVLDLEGNLIGGSIPLSFQGLRKLRVLNLGFNKIVGILPSVLGGIDSLEVLNLAANGLNGSVPGFVGKLRGVYLSFNQFSGVIPVEIGKNCGKLEHLDLSGNLLVQEIPISLGNCGGLKTLLLYSNLLEEDIPAEFGKLKSLEVLDVSRNTLSGHIPRELGNCTELSVVVLSNLFNPVGDVEFVALNDELNYFEGSMPEEVVTLPKLRILWAPMVNLEGGFPMSWGACSNLEMVNLAQNFFTGEFPNQLGLCKKLHFLDLSSNNLTGELSKELQVPCMTVFDVSVNMLSGSVPVFSNNGCSPFPLWNGNPFESVDVTSPYASYFSSKVRERLLFTSLGGVGISVFHNFGQNNFTGIQSLPIARDRMQEKSGYTLLVGENKLTGLFPTYLLEKCDGLDALLLNVSYNRFSGEFPSNISKMCRSLNFLDASGNQISGPIPPALGDSVSLVSLNLSRNLLLGQIPSSLGQMKDLKLLSLAGNNLSGSIPSNLGQLYSLQVLDLSTNSLTGEIPKFIENMRNLTIVLLNNNNLSGHIPAGLANVTTLSVFNVSFNNLSGFLPSNSSLIKCSSAVGNPFLSSCRGVSLTVPSANQQGQFDDNSSMTAADIEKSSDNGFSAIEIASIASASAIVSVLIALIVLFFFTRRWKPNSRVGGSTKREVTVFTDIGVPLTFENVVQATGNFNASNCIGSGGFGATYKAEISQGILVAVKRLSVGRFQGVQQFHAEIKTLGRLHHPNLVTLIGYHACETEMFLIYNYLPGGNLEKFIQERSTRAVDWKVLHKIALDIARALSYLHDQCVPRVLHRDVKPSNILLDDDLNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLREGRAKEFFAAGLWDVGPEHDLVEVLHLAVVCTVDSLSTRPTMKQVVKRLKQLQPPPC* 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0404 1112 Gene3D Phosphorylase Kinase; domain 1 797 908 - -
Mtr6g0404 1112 Pfam Protein kinase domain 836 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0404 1112 ProSitePatterns Protein kinases ATP-binding region signature. 839 861 IPR017441 GO:0005524
Mtr6g0404 1112 SUPERFAMILY Protein kinase-like (PK-like) 813 1105 IPR011009 -
Mtr6g0404 1112 SUPERFAMILY L domain-like 121 700 - -
Mtr6g0404 1112 CDD STKc_IRAK 839 1107 - -
Mtr6g0404 1112 Gene3D Ribonuclease Inhibitor 332 456 IPR032675 -
Mtr6g0404 1112 Gene3D Transferase(Phosphotransferase) domain 1 909 1108 - -
Mtr6g0404 1112 Gene3D Ribonuclease Inhibitor 495 780 IPR032675 -
Mtr6g0404 1112 ProSitePatterns Serine/Threonine protein kinases active-site signature. 953 965 IPR008271 GO:0004672|GO:0006468
Mtr6g0404 1112 SMART LRR_typ_2 174 197 IPR003591 -
Mtr6g0404 1112 SMART LRR_typ_2 244 268 IPR003591 -
Mtr6g0404 1112 SMART LRR_typ_2 621 645 IPR003591 -
Mtr6g0404 1112 SMART LRR_typ_2 292 316 IPR003591 -
Mtr6g0404 1112 SMART LRR_typ_2 669 692 IPR003591 -
Mtr6g0404 1112 SMART LRR_typ_2 150 173 IPR003591 -
Mtr6g0404 1112 Gene3D Ribonuclease Inhibitor 221 331 IPR032675 -
Mtr6g0404 1112 Pfam Leucine Rich Repeat 246 268 IPR001611 GO:0005515
Mtr6g0404 1112 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 10 1110 - -
Mtr6g0404 1112 ProSiteProfiles Protein kinase domain profile. 833 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0404 1112 Gene3D Ribonuclease Inhibitor 26 220 IPR032675 -
Mtr6g0404 1112 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Mtr6g0404 1112 SMART serkin_6 833 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0404 1112 Pfam Leucine rich repeat 170 211 IPR001611 GO:0005515
Mtr6g0404 1112 PRINTS Leucine-rich repeat signature 408 421 - -
Mtr6g0404 1112 PRINTS Leucine-rich repeat signature 645 658 - -
Mtr6g0404 1112 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 10 1110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0404 Mtr-Chr6 4862750 4866633 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0404 28 1112 Receptor kinase-like Gene Family AT3G02130 63.342 0.0 1321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Mtr6g0404 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0404 - - gmx:100819882 1645.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0404 6 4862750 4866633 Mtr6g0404 6 4862750 4866633 ECH