Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0401 ATGAGCACAAACACACAACATAGTTACAAACTCTCTGTGAAAAAAGCCACAAGAAGAACAAGAAGAAGAAAAATGGAAGAAAAATGCAAGTCCAAGAAGAAGCTTTCACAAAAGCTAAAAGCTCTTAAAAATTTAATTCCTTCTAACAATGGAGATGAAGTGAAAACTGATGAGTTGTTTAAGGAAACTGCTGATTACATAGTTTTTCTAAGAACAAGGGTGTTGATTCTTCAGAAGCTTGTTGAGATTTATGGAAACAACACTGAGAATAATGAACATGATGTATTGTTATAG 294 0.3265 MSTNTQHSYKLSVKKATRRTRRRKMEEKCKSKKKLSQKLKALKNLIPSNNGDEVKTDELFKETADYIVFLRTRVLILQKLVEIYGNNTENNEHDVLL* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0401 97 Coils Coil 25 45 - -
Mtr6g0401 97 MobiDBLite consensus disorder prediction 12 33 - -
Mtr6g0401 97 PANTHER TRANSCRIPTION FACTOR UPBEAT-LIKE PROTEIN 12 92 - -
Mtr6g0401 97 MobiDBLite consensus disorder prediction 1 33 - -
Mtr6g0401 97 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 32 84 IPR036638 GO:0046983
Mtr6g0401 97 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 12 92 IPR044660 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0401 6 91 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 32.558 3.07e-07 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0401 - - mtr:MTR_6g015150 149.828