Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0343 ATGAAGGGGATAAAGTTGTTGGTGTCAATGTCACAAGCTATGATGATCTTGCTTCTAGTTTGTACTGTGCTTGTTATGTTGCCGGTGGCCTCTGCTAAACGGTGGATTGTAGGAGACAAGAAGGGTTGGACTACGAATATTAATTACTCTACATGGATTGAAGGCAATAATTTCTACAATGGTGATTGGCTTTTTTTTTCGTATGATAGGAACCAAATGAATGTGCTAGAAGTGAACAAAACAGATTATGAAACTTGTAACTCGGATCATCCAATTTACAATTGGGCAGCTGGAGCTGGAAGAGATGTTGTTCCATTGAATGTGACTCGCGATTACTATCTCATCAGTGGCAAAGGATTTTGCTTTGGTGGTATGAAGTTAGCTATTCATGTCAAAAACTATCCACCTCCGCCTGTAGCTAGGGGTGTACATGGGTTGGGTCAACCCAAAAAATCCCGTAAAACCCATCCAAAAAACCAAAAAAAGAGGGTTGGATCGGGTAATTGCAAAAAACAACGATGA 522 0.4042 MKGIKLLVSMSQAMMILLLVCTVLVMLPVASAKRWIVGDKKGWTTNINYSTWIEGNNFYNGDWLFFSYDRNQMNVLEVNKTDYETCNSDHPIYNWAAGAGRDVVPLNVTRDYYLISGKGFCFGGMKLAIHVKNYPPPPVARGVHGLGQPKKSRKTHPKNQKKRVGSGNCKKQR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0343 173 MobiDBLite consensus disorder prediction 140 173 - -
Mtr6g0343 173 Gene3D - 31 134 IPR008972 -
Mtr6g0343 173 PANTHER LAMIN-LIKE PROTEIN 8 147 - -
Mtr6g0343 173 SUPERFAMILY Cupredoxins 32 131 IPR008972 -
Mtr6g0343 173 PANTHER BLUE COPPER PROTEIN 8 147 IPR039391 GO:0009055
Mtr6g0343 173 Pfam Plastocyanin-like domain 43 125 IPR003245 GO:0009055
Mtr6g0343 173 ProSiteProfiles Phytocyanin domain profile. 33 133 IPR003245 GO:0009055
Mtr6g0343 173 MobiDBLite consensus disorder prediction 147 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0343 Mtr-Chr6 4089926 4090913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0343 13 148 Phytocyanin Superfamily AT5G15350 52.482 7.94e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0343 - - mtr:MTR_6g013420 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0343 6 4089926 4090913 Mtr6g0343 6 4089926 4090913 ECH