Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0342 ATGAAAAATTCAAGAGTTCTTTTGATGGTGAGTGTGGTTTTGGGAGTGTTGTCATTGTGGCCAATGGTGGTCATGGGAGGTCCAAAGCTTCATAAGGTGGGAGGATCCAAAGGTTGGAAAGAGAATGTCAACTACACTACATGGTCTTCTCAAGAGCATGTCTATGTTGGTGATTGGCTAAAATTTGTCTTTGACAAAAGATACTACAATGTATTGGAAGTGAACAAGACAGGCTATGATTACTGCATCGACATGACCTTCATAAGAAACTTGACAAGAGGTGGTCGCGACGTGGTTCAATTGACGGAGGCAAAGACATACTACTTTATCACCGGTGGAGGTTACTGCTTTCACGGAATGAAAGTTGCCGTGGACGTTCAAGAACACCCAACACCTGCACCATCTCCATCTCTTTCAGATACAGCGAAATCCGGTGGTGATTCTATTTTGCCATCAATGTATACATGCTTTGGGATTATTGTTGCTAATGTTGTTTATGTGAGTTTGGTTTTAGTGGGGATTTTGTAA 528 0.4186 MKNSRVLLMVSVVLGVLSLWPMVVMGGPKLHKVGGSKGWKENVNYTTWSSQEHVYVGDWLKFVFDKRYYNVLEVNKTGYDYCIDMTFIRNLTRGGRDVVQLTEAKTYYFITGGGYCFHGMKVAVDVQEHPTPAPSPSLSDTAKSGGDSILPSMYTCFGIIVANVVYVSLVLVGIL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0342 175 PANTHER EARLY NODULIN-LIKE PROTEIN 20 10 164 - -
Mtr6g0342 175 Pfam Plastocyanin-like domain 39 120 IPR003245 GO:0009055
Mtr6g0342 175 Gene3D - 29 135 IPR008972 -
Mtr6g0342 175 SUPERFAMILY Cupredoxins 29 127 IPR008972 -
Mtr6g0342 175 ProSiteProfiles Phytocyanin domain profile. 29 128 IPR003245 GO:0009055
Mtr6g0342 175 PANTHER BLUE COPPER PROTEIN 10 164 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0342 Mtr-Chr6 4081931 4084196 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0342 22 141 Phytocyanin Superfamily AT2G27035 45.455 2.96e-37 124